Conservation of cofitness between HER17_RS00910 and HER17_RS03085 in Pectobacterium carotovorum WPP14

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00910 cystathionine gamma-synthase 1.0 HER17_RS03085 2-isopropylmalate synthase 0.99 4
Dickeya dianthicola 67-19 0.92 HGI48_RS20425 cystathionine gamma-synthase 0.89 HGI48_RS18055 2-isopropylmalate synthase 0.84 35
Dickeya dadantii 3937 0.92 DDA3937_RS00950 cystathionine gamma-synthase 0.89 DDA3937_RS18115 2-isopropylmalate synthase 0.80 50
Dickeya dianthicola ME23 0.92 DZA65_RS21470 cystathionine gamma-synthase 0.89 DZA65_RS19200 2-isopropylmalate synthase 0.93 14
Klebsiella michiganensis M5al 0.87 BWI76_RS00785 cystathionine gamma-synthase 0.85 BWI76_RS04680 2-isopropylmalate synthase 0.92 8
Escherichia coli ECOR27 0.87 NOLOHH_05820 metB cystathionine gamma-synthase 0.85 NOLOHH_03060 2-isopropylmalate synthase 0.95 16
Escherichia coli BW25113 0.87 b3939 metB cystathionine gamma-synthase (NCBI) 0.85 b0074 leuA 2-isopropylmalate synthase (NCBI) 0.91 10
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_04111 Cystathionine gamma-synthase 0.85 OHPLBJKB_03583 2-isopropylmalate synthase low > 73
Escherichia coli ECRC62 0.87 BNILDI_05715 metB cystathionine gamma-synthase 0.85 BNILDI_08550 2-isopropylmalate synthase 0.97 25
Enterobacter asburiae PDN3 0.87 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) 0.84 EX28DRAFT_3670 2-isopropylmalate synthase (EC 2.3.3.13) 0.95 5
Escherichia coli BL21 0.87 ECD_03825 cystathionine gamma-synthase, PLP-dependent 0.85 ECD_00076 2-isopropylmalate synthase 0.92 12
Escherichia coli Nissle 1917 0.87 ECOLIN_RS22725 cystathionine gamma-synthase 0.85 ECOLIN_RS00400 2-isopropylmalate synthase 0.97 8
Escherichia coli ECOR38 0.87 HEPCGN_12345 metB cystathionine gamma-synthase 0.85 HEPCGN_08695 2-isopropylmalate synthase 0.96 7
Escherichia fergusonii Becca 0.87 EFB2_04679 Cystathionine gamma-synthase 0.85 EFB2_03971 2-isopropylmalate synthase low > 86
Escherichia coli ECRC101 0.87 MCAODC_04175 metB cystathionine gamma-synthase 0.85 MCAODC_01230 2-isopropylmalate synthase 0.97 7
Escherichia coli ECRC98 0.87 JDDGAC_17300 metB cystathionine gamma-synthase 0.85 JDDGAC_14310 2-isopropylmalate synthase 0.99 6
Escherichia coli ECRC100 0.87 OKFHMN_13675 metB cystathionine gamma-synthase 0.85 OKFHMN_10715 2-isopropylmalate synthase 0.99 11
Escherichia coli ECRC102 0.87 NIAGMN_11430 metB cystathionine gamma-synthase 0.85 NIAGMN_08565 2-isopropylmalate synthase — —
Escherichia coli ECRC99 0.87 KEDOAH_14485 metB cystathionine gamma-synthase 0.85 KEDOAH_17440 2-isopropylmalate synthase — —
Enterobacter sp. TBS_079 0.87 MPMX20_04531 Cystathionine gamma-synthase 0.84 MPMX20_00769 2-isopropylmalate synthase 0.93 16
Erwinia tracheiphila SCR3 0.85 LU632_RS19640 metB cystathionine gamma-synthase 0.81 LU632_RS02880 leuA 2-isopropylmalate synthase 0.87 12
Serratia liquefaciens MT49 0.84 IAI46_24540 cystathionine gamma-synthase 0.84 IAI46_03355 2-isopropylmalate synthase low > 86
Pantoea sp. MT58 0.79 IAI47_00880 cystathionine gamma-synthase 0.81 IAI47_16000 2-isopropylmalate synthase 0.99 1
Rahnella sp. WP5 0.77 EX31_RS14215 cystathionine gamma-synthase 0.81 EX31_RS03680 2-isopropylmalate synthase 0.95 34
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_13550 O-succinylhomoserine (thiol)-lyase 0.70 CSW01_12595 2-isopropylmalate synthase low > 62
Shewanella amazonensis SB2B 0.61 Sama_3171 cystathionine gamma-synthase (RefSeq) 0.66 Sama_0335 2-isopropylmalate synthase (RefSeq) 0.97 14
Shewanella loihica PV-4 0.60 Shew_0520 O-succinylhomoserine (thiol)-lyase (RefSeq) 0.65 Shew_3472 2-isopropylmalate synthase (RefSeq) 0.98 7
Shewanella sp. ANA-3 0.59 Shewana3_3614 cystathionine gamma-synthase (RefSeq) 0.65 Shewana3_3761 2-isopropylmalate synthase (RefSeq) 0.95 7
Shewanella oneidensis MR-1 0.58 SO4056 metB cystathionine gamma-synthase (NCBI ptt file) 0.65 SO4236 leuA 2-isopropylmalate synthase (NCBI ptt file) 0.97 8
Lysobacter sp. OAE881 0.58 ABIE51_RS16185 O-succinylhomoserine (thiol)-lyase 0.40 ABIE51_RS17570 2-isopropylmalate synthase 0.86 62
Rhodanobacter denitrificans MT42 0.57 LRK55_RS05085 cystathionine gamma-synthase 0.40 LRK55_RS09985 2-isopropylmalate synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS05305 cystathionine gamma-synthase 0.40 LRK54_RS10345 2-isopropylmalate synthase 0.66 21
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.1596.1 hypothetical protein 0.37 Xcc-8004.1056.1 2-isopropylmalate synthase (EC 2.3.3.13) low > 74
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS19030 cystathionine gamma-synthase 0.41 ABZR86_RS15970 2-isopropylmalate synthase 0.96 14
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_01515 metB cystathionine gamma-synthase 0.39 OKGIIK_13575 leuA 2-isopropylmalate synthase low > 52
Sinorhizobium meliloti 1021 0.50 SMc02595 cystathionine gamma-synthase 0.16 SMc02546 alpha-isopropylmalate/homocitrate synthase family transferase low > 103
Acinetobacter radioresistens SK82 0.34 MPMX26_01645 O-succinylhomoserine sulfhydrylase 0.11 MPMX26_00404 2-isopropylmalate synthase low > 36
Variovorax sp. OAS795 0.30 ABID97_RS21630 O-succinylhomoserine sulfhydrylase 0.41 ABID97_RS14910 2-isopropylmalate synthase — —
Dinoroseobacter shibae DFL-12 0.30 Dshi_1002 Cystathionine gamma-synthase (RefSeq) 0.39 Dshi_0596 2-isopropylmalate synthase (RefSeq) low > 64

Not shown: 3 genomes with orthologs for HER17_RS00910 only; 52 genomes with orthologs for HER17_RS03085 only