Conservation of cofitness between HER17_RS00910 and HER17_RS03075 in Pectobacterium carotovorum WPP14

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00910 cystathionine gamma-synthase 1.0 HER17_RS03075 3-isopropylmalate dehydratase large subunit 0.99 3
Dickeya dianthicola 67-19 0.92 HGI48_RS20425 cystathionine gamma-synthase 0.89 HGI48_RS18065 3-isopropylmalate dehydratase large subunit 0.77 59
Dickeya dadantii 3937 0.92 DDA3937_RS00950 cystathionine gamma-synthase 0.89 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit 0.74 70
Dickeya dianthicola ME23 0.92 DZA65_RS21470 cystathionine gamma-synthase 0.89 DZA65_RS19210 3-isopropylmalate dehydratase large subunit 0.87 25
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_04111 Cystathionine gamma-synthase 0.85 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit low > 73
Escherichia coli ECOR27 0.87 NOLOHH_05820 metB cystathionine gamma-synthase 0.85 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1 0.95 13
Escherichia coli ECRC62 0.87 BNILDI_05715 metB cystathionine gamma-synthase 0.85 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1 0.98 10
Klebsiella michiganensis M5al 0.87 BWI76_RS00785 cystathionine gamma-synthase 0.84 BWI76_RS04670 3-isopropylmalate dehydratase large subunit 0.93 7
Escherichia coli BW25113 0.87 b3939 metB cystathionine gamma-synthase (NCBI) 0.85 b0072 leuC isopropylmalate isomerase large subunit (NCBI) 0.91 8
Escherichia coli Nissle 1917 0.87 ECOLIN_RS22725 cystathionine gamma-synthase 0.85 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit 0.95 10
Enterobacter asburiae PDN3 0.87 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) 0.87 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit 0.96 3
Escherichia coli BL21 0.87 ECD_03825 cystathionine gamma-synthase, PLP-dependent 0.85 ECD_00074 3-isopropylmalate dehydratase large subunit 0.95 5
Escherichia coli ECOR38 0.87 HEPCGN_12345 metB cystathionine gamma-synthase 0.85 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 0.97 5
Escherichia fergusonii Becca 0.87 EFB2_04679 Cystathionine gamma-synthase 0.85 EFB2_03973 3-isopropylmalate dehydratase large subunit low > 86
Escherichia coli ECRC102 0.87 NIAGMN_11430 metB cystathionine gamma-synthase 0.85 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1 — —
Escherichia coli ECRC101 0.87 MCAODC_04175 metB cystathionine gamma-synthase 0.85 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1 0.94 14
Escherichia coli ECRC98 0.87 JDDGAC_17300 metB cystathionine gamma-synthase 0.85 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1 0.99 3
Escherichia coli ECRC99 0.87 KEDOAH_14485 metB cystathionine gamma-synthase 0.85 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1 — —
Enterobacter sp. TBS_079 0.87 MPMX20_04531 Cystathionine gamma-synthase 0.86 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 0.95 6
Escherichia coli ECRC100 0.87 OKFHMN_13675 metB cystathionine gamma-synthase 0.85 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1 0.98 18
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) 0.86 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 78
Erwinia tracheiphila SCR3 0.85 LU632_RS19640 metB cystathionine gamma-synthase 0.78 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit 0.80 28
Serratia liquefaciens MT49 0.84 IAI46_24540 cystathionine gamma-synthase 0.89 IAI46_03345 3-isopropylmalate dehydratase large subunit low > 86
Pantoea sp. MT58 0.79 IAI47_00880 cystathionine gamma-synthase 0.87 IAI47_16010 3-isopropylmalate dehydratase large subunit 0.99 2
Rahnella sp. WP5 0.77 EX31_RS14215 cystathionine gamma-synthase 0.91 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.98 12
Shewanella amazonensis SB2B 0.61 Sama_3171 cystathionine gamma-synthase (RefSeq) 0.69 Sama_0337 isopropylmalate isomerase large subunit (RefSeq) 0.99 8
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_13550 O-succinylhomoserine (thiol)-lyase 0.78 CSW01_12605 3-isopropylmalate dehydratase large subunit low > 62
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_2459 cystathionine gamma-synthase (EC 2.5.1.48) 0.62 B158DRAFT_1319 3-isopropylmalate dehydratase, large subunit low > 40
Shewanella loihica PV-4 0.60 Shew_0520 O-succinylhomoserine (thiol)-lyase (RefSeq) 0.70 Shew_3470 isopropylmalate isomerase large subunit (RefSeq) 0.97 15
Shewanella sp. ANA-3 0.59 Shewana3_3614 cystathionine gamma-synthase (RefSeq) 0.70 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq) 0.96 6
Shewanella oneidensis MR-1 0.58 SO4056 metB cystathionine gamma-synthase (NCBI ptt file) 0.70 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) 0.97 10
Lysobacter sp. OAE881 0.58 ABIE51_RS16185 O-succinylhomoserine (thiol)-lyase 0.49 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit 0.93 44
Rhodanobacter denitrificans MT42 0.57 LRK55_RS05085 cystathionine gamma-synthase 0.54 LRK55_RS07105 3-isopropylmalate dehydratase large subunit low > 63
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS16160 cystathionine gamma-synthase 0.50 A4249_RS10005 3-isopropylmalate dehydratase large subunit 0.99 18
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS05305 cystathionine gamma-synthase 0.54 LRK54_RS07375 3-isopropylmalate dehydratase large subunit low > 59
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.1596.1 hypothetical protein 0.62 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 74
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS19030 cystathionine gamma-synthase 0.51 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit 0.96 9
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_01515 metB cystathionine gamma-synthase 0.50 OKGIIK_13585 leuC 3-isopropylmalate dehydratase large subunit 0.52 34
Sinorhizobium meliloti 1021 0.50 SMc02595 cystathionine gamma-synthase 0.64 SMc03823 isopropylmalate isomerase large subunit low > 103
Acinetobacter radioresistens SK82 0.34 MPMX26_01645 O-succinylhomoserine sulfhydrylase 0.59 MPMX26_00345 3-isopropylmalate dehydratase large subunit 0.90 17
Variovorax sp. OAS795 0.30 ABID97_RS21630 O-succinylhomoserine sulfhydrylase 0.59 ABID97_RS08465 3-isopropylmalate dehydratase large subunit — —
Dinoroseobacter shibae DFL-12 0.30 Dshi_1002 Cystathionine gamma-synthase (RefSeq) 0.59 Dshi_0085 3-isopropylmalate dehydratase, large subunit (RefSeq) low > 64

Not shown: 0 genomes with orthologs for HER17_RS00910 only; 61 genomes with orthologs for HER17_RS03075 only