Conservation of cofitness between HER17_RS00910 and HER17_RS02900 in Pectobacterium carotovorum WPP14

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00910 cystathionine gamma-synthase 1.0 HER17_RS02900 carbamoyl-phosphate synthase large subunit 0.98 6
Dickeya dianthicola 67-19 0.92 HGI48_RS20425 cystathionine gamma-synthase 0.96 HGI48_RS18240 carbamoyl-phosphate synthase large subunit low > 71
Dickeya dadantii 3937 0.92 DDA3937_RS00950 cystathionine gamma-synthase 0.96 DDA3937_RS18305 carbamoyl-phosphate synthase large subunit 0.78 57
Dickeya dianthicola ME23 0.92 DZA65_RS21470 cystathionine gamma-synthase 0.96 DZA65_RS19380 carbamoyl-phosphate synthase large subunit 0.73 58
Klebsiella michiganensis M5al 0.87 BWI76_RS00785 cystathionine gamma-synthase 0.95 BWI76_RS04470 carbamoyl phosphate synthase large subunit 0.61 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_04111 Cystathionine gamma-synthase 0.95 OHPLBJKB_03624 Carbamoyl-phosphate synthase large chain low > 73
Escherichia coli BW25113 0.87 b3939 metB cystathionine gamma-synthase (NCBI) 0.95 b0033 carB carbamoyl-phosphate synthase large subunit (NCBI) 0.82 47
Escherichia coli ECRC62 0.87 BNILDI_05715 metB cystathionine gamma-synthase 0.95 BNILDI_08330 carB carbamoyl-phosphate synthase large subunit low > 75
Escherichia coli ECOR27 0.87 NOLOHH_05820 metB cystathionine gamma-synthase 0.95 NOLOHH_03270 carB carbamoyl-phosphate synthase large subunit low > 75
Escherichia coli Nissle 1917 0.87 ECOLIN_RS22725 cystathionine gamma-synthase 0.95 ECOLIN_RS00180 carbamoyl-phosphate synthase large subunit 0.83 28
Escherichia coli BL21 0.87 ECD_03825 cystathionine gamma-synthase, PLP-dependent 0.95 ECD_00037 carbamoyl-phosphate synthase large subunit low > 61
Enterobacter asburiae PDN3 0.87 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) 0.96 EX28DRAFT_3638 carbamoyl-phosphate synthase, large subunit — —
Escherichia coli ECOR38 0.87 HEPCGN_12345 metB cystathionine gamma-synthase 0.95 HEPCGN_08925 carB carbamoyl-phosphate synthase large subunit 0.82 68
Escherichia fergusonii Becca 0.87 EFB2_04679 Cystathionine gamma-synthase 0.95 EFB2_04012 Carbamoyl-phosphate synthase large chain low > 86
Escherichia coli ECRC98 0.87 JDDGAC_17300 metB cystathionine gamma-synthase 0.95 JDDGAC_14535 carB carbamoyl-phosphate synthase large subunit 0.93 26
Escherichia coli ECRC102 0.87 NIAGMN_11430 metB cystathionine gamma-synthase 0.95 NIAGMN_08790 carB carbamoyl-phosphate synthase large subunit — —
Enterobacter sp. TBS_079 0.87 MPMX20_04531 Cystathionine gamma-synthase 0.95 MPMX20_00740 Carbamoyl-phosphate synthase large chain 0.87 43
Escherichia coli ECRC99 0.87 KEDOAH_14485 metB cystathionine gamma-synthase 0.95 KEDOAH_17215 carB carbamoyl-phosphate synthase large subunit — —
Escherichia coli ECRC101 0.87 MCAODC_04175 metB cystathionine gamma-synthase 0.95 MCAODC_01455 carB carbamoyl-phosphate synthase large subunit 0.70 72
Escherichia coli ECRC100 0.87 OKFHMN_13675 metB cystathionine gamma-synthase 0.95 OKFHMN_10940 carB carbamoyl-phosphate synthase large subunit low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) 0.95 GFF213 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) low > 78
Erwinia tracheiphila SCR3 0.85 LU632_RS19640 metB cystathionine gamma-synthase 0.92 LU632_RS02750 carB carbamoyl-phosphate synthase large subunit low > 74
Serratia liquefaciens MT49 0.84 IAI46_24540 cystathionine gamma-synthase 0.96 IAI46_03195 carbamoyl-phosphate synthase large subunit low > 86
Pantoea sp. MT58 0.79 IAI47_00880 cystathionine gamma-synthase 0.94 IAI47_16115 carbamoyl-phosphate synthase large subunit 0.90 43
Rahnella sp. WP5 0.77 EX31_RS14215 cystathionine gamma-synthase 0.95 EX31_RS03830 carbamoyl-phosphate synthase large subunit 0.97 20
Shewanella amazonensis SB2B 0.61 Sama_3171 cystathionine gamma-synthase (RefSeq) 0.85 Sama_2503 carB carbamoyl phosphate synthase large subunit (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_13550 O-succinylhomoserine (thiol)-lyase 0.87 CSW01_12100 carbamoyl-phosphate synthase large chain low > 62
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_2459 cystathionine gamma-synthase (EC 2.5.1.48) 0.73 B158DRAFT_0616 carbamoyl-phosphate synthase, large subunit — —
Shewanella loihica PV-4 0.60 Shew_0520 O-succinylhomoserine (thiol)-lyase (RefSeq) 0.84 Shew_2838 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.87 56
Shewanella sp. ANA-3 0.59 Shewana3_3614 cystathionine gamma-synthase (RefSeq) 0.84 Shewana3_0968 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.91 39
Shewanella oneidensis MR-1 0.58 SO4056 metB cystathionine gamma-synthase (NCBI ptt file) 0.84 SO1142 carB carbamoyl-phosphate synthase, large subunit (NCBI ptt file) 0.87 59
Lysobacter sp. OAE881 0.58 ABIE51_RS16185 O-succinylhomoserine (thiol)-lyase 0.69 ABIE51_RS11615 carbamoyl-phosphate synthase large subunit low > 62
Rhodanobacter denitrificans MT42 0.57 LRK55_RS05085 cystathionine gamma-synthase 0.70 LRK55_RS17855 carbamoyl-phosphate synthase large subunit — —
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS16160 cystathionine gamma-synthase 0.58 A4249_RS00725 carbamoyl-phosphate synthase large subunit — —
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS05305 cystathionine gamma-synthase 0.70 LRK54_RS18000 carbamoyl-phosphate synthase large subunit — —
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS19030 cystathionine gamma-synthase 0.69 ABZR86_RS05600 carbamoyl-phosphate synthase large subunit — —
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.1596.1 hypothetical protein 0.70 Xcc-8004.2912.1 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) — —
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_01515 metB cystathionine gamma-synthase 0.70 OKGIIK_07295 carB carbamoyl-phosphate synthase large subunit low > 52
Sinorhizobium meliloti 1021 0.50 SMc02595 cystathionine gamma-synthase 0.58 SMc01215 carbamoyl phosphate synthase large subunit low > 103
Acinetobacter radioresistens SK82 0.34 MPMX26_01645 O-succinylhomoserine sulfhydrylase 0.72 MPMX26_00766 Carbamoyl-phosphate synthase large chain low > 36
Variovorax sp. OAS795 0.30 ABID97_RS21630 O-succinylhomoserine sulfhydrylase 0.67 ABID97_RS17080 carbamoyl-phosphate synthase large subunit — —
Dinoroseobacter shibae DFL-12 0.30 Dshi_1002 Cystathionine gamma-synthase (RefSeq) 0.59 Dshi_2639 carbamoyl-phosphate synthase, large subunit (RefSeq) low > 64

Not shown: 0 genomes with orthologs for HER17_RS00910 only; 62 genomes with orthologs for HER17_RS02900 only