Conservation of cofitness between HER17_RS00965 and HER17_RS02595 in Pectobacterium carotovorum WPP14

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00965 HTH-type transcriptional repressor FabR 1.0 HER17_RS02595 FtsH protease activity modulator HflK 0.93 4
Dickeya dianthicola ME23 0.93 DZA65_RS21440 HTH-type transcriptional repressor FabR 0.75 DZA65_RS19670 FtsH protease activity modulator HflK low > 75
Dickeya dianthicola 67-19 0.93 HGI48_RS20395 HTH-type transcriptional repressor FabR 0.75 HGI48_RS18535 FtsH protease activity modulator HflK low > 71
Dickeya dadantii 3937 0.93 DDA3937_RS00980 HTH-type transcriptional repressor FabR 0.75 DDA3937_RS18600 FtsH protease activity modulator HflK low > 74
Enterobacter sp. TBS_079 0.92 MPMX20_04517 HTH-type transcriptional repressor FabR 0.70 MPMX20_00455 Modulator of FtsH protease HflK low > 85
Escherichia coli ECRC102 0.92 NIAGMN_11295 fabR HTH-type transcriptional repressor FabR 0.71 NIAGMN_10095 hflK FtsH protease activity modulator HflK
Escherichia coli ECRC101 0.92 MCAODC_04045 fabR HTH-type transcriptional repressor FabR 0.71 MCAODC_02760 hflK FtsH protease activity modulator HflK low > 87
Escherichia coli BL21 0.92 ECD_03848 transcriptional repressor of fabA and fabB 0.71 ECD_04041 modulator for HflB protease specific for phage lambda cII repressor low > 61
Escherichia coli ECRC98 0.92 JDDGAC_17170 fabR HTH-type transcriptional repressor FabR 0.71 JDDGAC_15885 hflK FtsH protease activity modulator HflK low > 86
Escherichia coli ECOR38 0.92 HEPCGN_12200 fabR HTH-type transcriptional repressor FabR 0.71 HEPCGN_10475 hflK FtsH protease activity modulator HflK low > 87
Escherichia coli BW25113 0.92 b3963 fabR DNA-binding transcriptional repressor (RefSeq) 0.71 b4174 hflK modulator for HflB protease specific for phage lambda cII repressor (NCBI) low > 76
Escherichia coli ECRC99 0.92 KEDOAH_14615 fabR HTH-type transcriptional repressor FabR 0.71 KEDOAH_15910 hflK FtsH protease activity modulator HflK
Escherichia fergusonii Becca 0.92 EFB2_04647 HTH-type transcriptional repressor FabR 0.73 EFB2_04361 Modulator of FtsH protease HflK low > 86
Escherichia coli ECRC62 0.92 BNILDI_05835 fabR HTH-type transcriptional repressor FabR 0.71 BNILDI_06980 hflK FtsH protease activity modulator HflK low > 75
Escherichia coli ECRC100 0.92 OKFHMN_13545 fabR HTH-type transcriptional repressor FabR 0.71 OKFHMN_12245 hflK FtsH protease activity modulator HflK low > 80
Escherichia coli Nissle 1917 0.92 ECOLIN_RS22890 HTH-type transcriptional repressor FabR 0.71 ECOLIN_RS24240 FtsH protease activity modulator HflK low > 55
Enterobacter asburiae PDN3 0.92 EX28DRAFT_4426 transcriptional regulator, TetR family 0.75 EX28DRAFT_3371 HflK protein low > 76
Escherichia coli ECOR27 0.92 NOLOHH_05690 fabR HTH-type transcriptional repressor FabR 0.71 NOLOHH_04510 hflK FtsH protease activity modulator HflK low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_04087 HTH-type transcriptional repressor FabR 0.71 OHPLBJKB_03868 Modulator of FtsH protease HflK low > 73
Klebsiella michiganensis M5al 0.91 BWI76_RS00875 DNA-binding transcriptional regulator FabR 0.70 BWI76_RS02545 protease modulator HflK low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2349 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.71 GFF827 HflK protein low > 78
Serratia liquefaciens MT49 0.91 IAI46_24465 HTH-type transcriptional repressor FabR 0.69 IAI46_01635 FtsH protease activity modulator HflK low > 86
Rahnella sp. WP5 0.90 EX31_RS14160 HTH-type transcriptional repressor FabR 0.65 EX31_RS08810 FtsH protease activity modulator HflK low > 89
Erwinia tracheiphila SCR3 0.90 LU632_RS19580 fabR HTH-type transcriptional repressor FabR 0.67 LU632_RS02065 hflK FtsH protease activity modulator HflK low > 74
Pantoea sp. MT58 0.90 IAI47_00940 HTH-type transcriptional repressor FabR 0.67 IAI47_02600 FtsH protease activity modulator HflK low > 76
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_00775 HTH-type transcriptional repressor FabR 0.46 CSW01_01845 protease modulator HflK low > 62
Shewanella amazonensis SB2B 0.65 Sama_0192 DNA-binding transcriptional repressor FabR (RefSeq) 0.45 Sama_3023 hflK protein (RefSeq) 0.46 47
Shewanella sp. ANA-3 0.65 Shewana3_0178 DNA-binding transcriptional repressor FabR (RefSeq) 0.46 Shewana3_0599 HflK protein (RefSeq) low > 73
Shewanella loihica PV-4 0.65 Shew_0137 DNA-binding transcriptional repressor FabR (RefSeq) 0.45 Shew_0568 HflK protein (RefSeq) 0.43 5
Shewanella oneidensis MR-1 0.65 SO0198 transcriptional regulator, TetR family (NCBI ptt file) 0.45 SO0605 hflK hflK protein (NCBI ptt file) low > 76
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_1831 transcriptional regulator, TetR family 0.29 B158DRAFT_1954 protease FtsH subunit HflK low > 40
Marinobacter adhaerens HP15 0.56 HP15_2045 DNA-binding transcriptional repressor FabR 0.32 HP15_2497 HflK low > 73
Alteromonas macleodii MIT1002 0.55 MIT1002_03371 HTH-type transcriptional repressor FabR 0.44 MIT1002_03786 Modulator of FtsH protease HflK low > 70
Pseudomonas sp. S08-1 0.31 OH686_16690 Transcriptional regulator, AcrR family 0.31 OH686_09460 HflK protein low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_4450 transcriptional regulator, TetR family 0.33 Psyr_0574 protease FtsH subunit HflK low > 86
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_4450 transcriptional regulator, TetR family 0.33 Psyr_0574 protease FtsH subunit HflK low > 86
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_110 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.33 PfGW456L13_152 HflK protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_1370 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.34 Pf1N1B4_1410 HflK protein
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_13415 TetR family transcriptional regulator 0.34 AO353_13155 hypothetical protein low > 101
Pseudomonas sp. RS175 0.27 PFR28_05164 HTH-type transcriptional repressor FabR 0.33 PFR28_05123 Modulator of FtsH protease HflK low > 88
Pseudomonas putida KT2440 0.27 PP_4859 Transcriptional regulator, TetR family 0.32 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex low > 96
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_08445 TetR family transcriptional regulator 0.34 AO356_08645 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_3568 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.33 Pf6N2E2_3612 HflK protein low > 103
Pseudomonas simiae WCS417 0.27 PS417_02720 TetR family transcriptional regulator 0.33 PS417_02500 membrane protein
Pseudomonas fluorescens SBW25 0.26 PFLU_RS02790 TetR family transcriptional regulator 0.35 PFLU_RS02580 FtsH protease activity modulator HflK low > 109
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS02790 TetR family transcriptional regulator 0.35 PFLU_RS02580 FtsH protease activity modulator HflK low > 109

Not shown: 5 genomes with orthologs for HER17_RS00965 only; 16 genomes with orthologs for HER17_RS02595 only