Conservation of cofitness between HER17_RS02810 and HER17_RS02305 in Pectobacterium carotovorum WPP14

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02810 peroxide stress protein YaaA 1.0 HER17_RS02305 glyoxylate bypass operon transcriptional repressor IclR 0.84 18
Dickeya dadantii 3937 0.84 DDA3937_RS18400 peroxide stress protein YaaA 0.87 DDA3937_RS19045 glyoxylate bypass operon transcriptional repressor IclR low > 74
Escherichia coli ECOR38 0.82 HEPCGN_09095 yaaA peroxide stress protein YaaA 0.77 HEPCGN_11890 iclR glyoxylate bypass operon transcriptional repressor IclR low > 87
Enterobacter sp. TBS_079 0.82 MPMX20_00714 Peroxide stress resistance protein YaaA 0.77 MPMX20_00234 Transcriptional repressor IclR low > 85
Escherichia fergusonii Becca 0.82 EFB2_04037 Peroxide stress resistance protein YaaA 0.78 EFB2_04593 Transcriptional repressor IclR low > 86
Escherichia coli Nissle 1917 0.82 ECOLIN_RS00035 peroxide stress protein YaaA 0.77 ECOLIN_RS23155 glyoxylate bypass operon transcriptional repressor IclR low > 55
Dickeya dianthicola ME23 0.82 DZA65_RS19470 peroxide stress protein YaaA 0.84 DZA65_RS20255 glyoxylate bypass operon transcriptional repressor IclR low > 75
Escherichia coli ECRC102 0.82 NIAGMN_08940 yaaA peroxide stress protein YaaA 0.78 NIAGMN_10995 iclR glyoxylate bypass operon transcriptional repressor IclR — —
Escherichia coli ECRC98 0.82 JDDGAC_14685 yaaA peroxide stress protein YaaA 0.78 JDDGAC_16870 iclR glyoxylate bypass operon transcriptional repressor IclR low > 86
Escherichia coli ECRC101 0.82 MCAODC_01605 yaaA peroxide stress protein YaaA 0.78 MCAODC_03745 iclR glyoxylate bypass operon transcriptional repressor IclR low > 87
Escherichia coli ECRC100 0.82 OKFHMN_11090 yaaA peroxide stress protein YaaA 0.78 OKFHMN_13245 iclR glyoxylate bypass operon transcriptional repressor IclR low > 80
Escherichia coli ECRC99 0.82 KEDOAH_17065 yaaA peroxide stress protein YaaA 0.78 KEDOAH_14915 iclR glyoxylate bypass operon transcriptional repressor IclR — —
Dickeya dianthicola 67-19 0.82 HGI48_RS18330 peroxide stress protein YaaA 0.84 HGI48_RS19135 glyoxylate bypass operon transcriptional repressor IclR low > 71
Escherichia coli BL21 0.82 ECD_00006 peroxide resistance protein, lowers intracellular iron 0.78 ECD_03890 transcriptional repressor low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_03654 hypothetical protein 0.78 OHPLBJKB_04031 Transcriptional repressor IclR low > 73
Enterobacter asburiae PDN3 0.81 EX28DRAFT_3618 Uncharacterized protein conserved in bacteria 0.75 EX28DRAFT_4327 transcriptional regulator, IclR family low > 76
Escherichia coli ECRC62 0.81 BNILDI_08185 yaaA peroxide stress protein YaaA 0.78 BNILDI_06135 iclR glyoxylate bypass operon transcriptional repressor IclR low > 75
Escherichia coli ECOR27 0.81 NOLOHH_03420 yaaA peroxide stress protein YaaA 0.78 NOLOHH_05385 iclR glyoxylate bypass operon transcriptional repressor IclR low > 75
Escherichia coli BW25113 0.81 b0006 yaaA hypothetical protein (NCBI) 0.78 b4018 iclR repressor of aceBA operon (VIMSS) low > 76
Serratia liquefaciens MT49 0.80 IAI46_03045 peroxide stress protein YaaA 0.80 IAI46_23160 glyoxylate bypass operon transcriptional repressor IclR low > 86
Klebsiella michiganensis M5al 0.80 BWI76_RS04260 peroxide stress protein YaaA 0.75 BWI76_RS01680 transcriptional regulator IclR low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1081 UPF0246 protein YaaA 0.78 GFF1356 Acetate operon repressor low > 78
Pantoea sp. MT58 0.79 IAI47_16200 peroxide stress protein YaaA 0.77 IAI47_17995 glyoxylate bypass operon transcriptional repressor IclR low > 76
Rahnella sp. WP5 0.76 EX31_RS03930 peroxide stress protein YaaA 0.76 EX31_RS11755 glyoxylate bypass operon transcriptional repressor IclR low > 89
Acinetobacter radioresistens SK82 0.68 MPMX26_02017 Peroxide stress resistance protein YaaA 0.14 MPMX26_01598 HTH-type transcriptional regulator TsaQ1/TsaQ2 low > 36
Pseudomonas putida KT2440 0.67 PP_1289 conserved protein of unknown function, DUF328 family 0.17 PP_2601 Transcriptional regulator, IclR family low > 96
Pseudomonas sp. RS175 0.67 PFR28_03554 Peroxide stress resistance protein YaaA 0.19 PFR28_01464 Pca regulon regulatory protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_04675 hypothetical protein 0.17 AO353_06220 IclR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_17320 hypothetical protein 0.19 AO356_29660 IclR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_981 UPF0246 protein YaaA 0.17 Pf1N1B4_2744 Transcriptional regulator, IclR family 0.29 25
Pseudomonas simiae WCS417 0.65 PS417_04850 hypothetical protein 0.18 PS417_15475 IclR family transcriptional regulator low > 88
Pseudomonas stutzeri RCH2 0.64 Psest_3173 Uncharacterized protein conserved in bacteria 0.19 Psest_3780 Transcriptional regulator low > 67
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS04920 peroxide stress protein YaaA 0.18 PFLU_RS17460 IclR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.63 PFLU_RS04920 peroxide stress protein YaaA 0.18 PFLU_RS17460 IclR family transcriptional regulator low > 109
Paraburkholderia graminis OAS925 0.58 ABIE53_001622 cytoplasmic iron level regulating protein YaaA (DUF328/UPF0246 family) 0.21 ABIE53_001884 IclR family acetate operon transcriptional repressor low > 113
Shewanella sp. ANA-3 0.58 Shewana3_3143 hypothetical protein (RefSeq) 0.13 Shewana3_1275 IclR family transcriptional regulator (RefSeq) low > 73
Dechlorosoma suillum PS 0.58 Dsui_2322 hypothetical protein 0.22 Dsui_0127 transcriptional regulator low > 51
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_04599 hypothetical protein 0.22 H281DRAFT_02570 transcriptional regulator, IclR family low > 103
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS06780 hypothetical protein 0.22 BPHYT_RS21735 IclR family transcriptional regulator low > 109
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS24000 peroxide stress protein YaaA 0.22 QEN71_RS35560 IclR family transcriptional regulator low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF720 UPF0246 protein YaaA 0.21 GFF2386 Pca regulon regulatory protein PcaR low > 90
Variovorax sp. SCN45 0.48 GFF6020 UPF0246 protein YaaA 0.23 GFF3163 Transcriptional regulator, IclR family low > 127
Variovorax sp. OAS795 0.47 ABID97_RS07905 peroxide stress protein YaaA 0.21 ABID97_RS29345 IclR family transcriptional regulator low > 91
Castellaniella sp019104865 MT123 0.47 ABCV34_RS01170 peroxide stress protein YaaA 0.22 ABCV34_RS07905 IclR family transcriptional regulator low > 48
Dinoroseobacter shibae DFL-12 0.43 Dshi_3333 protein of unknown function DUF328 (RefSeq) 0.34 Dshi_0886 transcriptional regulator, IclR family (RefSeq) low > 64

Not shown: 30 genomes with orthologs for HER17_RS02810 only; 7 genomes with orthologs for HER17_RS02305 only