Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS17265 | | oxygen-dependent coproporphyrinogen oxidase | 1.0 | HER17_RS00505 | | high-affinity branched-chain amino acid ABC transporter permease LivM | 0.90 | 13 |
Dickeya dadantii 3937 | 0.81 | DDA3937_RS04365 | | oxygen-dependent coproporphyrinogen oxidase | 0.80 | DDA3937_RS00670 | | high-affinity branched-chain amino acid ABC transporter permease LivM | — | — |
Rahnella sp. WP5 | 0.80 | EX31_RS20260 | | oxygen-dependent coproporphyrinogen oxidase | 0.87 | EX31_RS14795 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 89 |
Dickeya dianthicola 67-19 | 0.80 | HGI48_RS04355 | | oxygen-dependent coproporphyrinogen oxidase | 0.80 | HGI48_RS20720 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 71 |
Dickeya dianthicola ME23 | 0.79 | DZA65_RS04275 | | oxygen-dependent coproporphyrinogen oxidase | 0.80 | DZA65_RS21730 | | high-affinity branched-chain amino acid ABC transporter permease LivM | — | — |
Serratia liquefaciens MT49 | 0.78 | IAI46_18545 | | oxygen-dependent coproporphyrinogen oxidase | 0.83 | IAI46_00970 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 86 |
Pantoea sp. MT58 | 0.76 | IAI47_05360 | | oxygen-dependent coproporphyrinogen oxidase | 0.79 | IAI47_01575 | | high-affinity branched-chain amino acid ABC transporter permease LivM | — | — |
Erwinia tracheiphila SCR3 | 0.75 | LU632_RS06720 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.83 | LU632_RS19245 | | high-affinity branched-chain amino acid ABC transporter permease LivM | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.73 | GFF2066 | | Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) | 0.79 | GFF550 | | Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) | low | > 78 |
Escherichia coli ECOR27 | 0.73 | NOLOHH_13775 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.78 | NOLOHH_08545 | livM | branched chain amino acid ABC transporter permease LivM | low | > 75 |
Escherichia coli ECRC62 | 0.73 | BNILDI_12640 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.78 | BNILDI_02960 | livM | branched chain amino acid ABC transporter permease LivM | low | > 75 |
Escherichia coli Nissle 1917 | 0.73 | ECOLIN_RS13965 | | oxygen-dependent coproporphyrinogen oxidase | 0.78 | ECOLIN_RS19765 | | branched chain amino acid ABC transporter permease LivM | low | > 55 |
Escherichia coli BL21 | 0.73 | ECD_02336 | | coproporphyrinogen III oxidase | 0.78 | ECD_03305 | | branched-chain amino acid ABC transporter permease | low | > 61 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.73 | OHPLBJKB_01286 | | Oxygen-dependent coproporphyrinogen-III oxidase | 0.78 | OHPLBJKB_00247 | | hypothetical protein | low | > 73 |
Escherichia coli BW25113 | 0.73 | b2436 | hemF | coproporphyrinogen III oxidase (NCBI) | 0.78 | b3456 | livM | leucine/isoleucine/valine transporter subunit (NCBI) | low | > 76 |
Escherichia coli ECOR38 | 0.73 | HEPCGN_21270 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.78 | HEPCGN_15570 | livM | branched chain amino acid ABC transporter permease LivM | low | > 87 |
Enterobacter sp. TBS_079 | 0.72 | MPMX20_03323 | | Oxygen-dependent coproporphyrinogen-III oxidase | 0.79 | MPMX20_04332 | | hypothetical protein | low | > 85 |
Enterobacter asburiae PDN3 | 0.72 | EX28DRAFT_0199 | | coproporphyrinogen oxidase (EC 1.3.3.3) | 0.78 | EX28DRAFT_4288 | | ABC-type branched-chain amino acid transport system, permease component | low | > 76 |
Escherichia fergusonii Becca | 0.72 | EFB2_01443 | | Oxygen-dependent coproporphyrinogen-III oxidase | 0.78 | EFB2_00366 | | hypothetical protein | low | > 86 |
Escherichia coli ECRC98 | 0.71 | JDDGAC_26045 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.78 | JDDGAC_20380 | livM | branched chain amino acid ABC transporter permease LivM | low | > 86 |
Escherichia coli ECRC101 | 0.71 | MCAODC_12625 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.78 | MCAODC_07280 | livM | branched chain amino acid ABC transporter permease LivM | low | > 87 |
Escherichia coli ECRC102 | 0.71 | NIAGMN_19865 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.78 | NIAGMN_14520 | livM | branched chain amino acid ABC transporter permease LivM | — | — |
Escherichia coli ECRC100 | 0.71 | OKFHMN_22095 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.78 | OKFHMN_16750 | livM | branched chain amino acid ABC transporter permease LivM | low | > 80 |
Escherichia coli ECRC99 | 0.71 | KEDOAH_06125 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.78 | KEDOAH_11390 | livM | branched chain amino acid ABC transporter permease LivM | — | — |
Klebsiella michiganensis M5al | 0.70 | BWI76_RS20740 | | coproporphyrinogen III oxidase | 0.80 | BWI76_RS26340 | | branched-chain amino acid ABC transporter permease | low | > 92 |
Pseudomonas stutzeri RCH2 | 0.67 | Psest_0028 | | Coproporphyrinogen III oxidase | 0.57 | Psest_1310 | | ABC-type branched-chain amino acid transport system, permease component | low | > 67 |
Pseudomonas fluorescens FW300-N1B4 | 0.67 | Pf1N1B4_1907 | | Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) | 0.58 | Pf1N1B4_3216 | | Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) | — | — |
Pseudomonas fluorescens GW456-L13 | 0.67 | PfGW456L13_645 | | Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) | 0.57 | PfGW456L13_4609 | | Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) | — | — |
Pseudomonas sp. RS175 | 0.66 | PFR28_04656 | | Oxygen-dependent coproporphyrinogen-III oxidase | 0.55 | PFR28_00538 | | hypothetical protein | — | — |
Pseudomonas putida KT2440 | 0.66 | PP_0073 | | Coproporphyrinogen-III oxidase, aerobic | 0.56 | PP_1139 | | branched chain amino acid transporter - permease subunit | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.66 | AO353_10665 | | coproporphyrinogen III oxidase | 0.55 | AO353_17115 | | leucine/isoleucine/valine transporter permease subunit | — | — |
Pseudomonas syringae pv. syringae B728a | 0.66 | Psyr_0024 | | coproporphyrinogen oxidase | 0.57 | Psyr_3847 | | L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.66 | Psyr_0024 | | coproporphyrinogen oxidase | 0.57 | Psyr_3847 | | L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.66 | Pf6N2E2_4129 | | Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) | 0.56 | Pf6N2E2_2924 | | ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, permease component 2 LivM (from data) | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.66 | AO356_11310 | | coproporphyrinogen III oxidase | 0.56 | AO356_05330 | | leucine/isoleucine/valine transporter permease subunit | — | — |
Pseudomonas sp. S08-1 | 0.66 | OH686_12490 | | Coproporphyrinogen III oxidase, aerobic | 0.58 | OH686_04615 | | Branched-chain amino acid ABC transporter, permease protein LivM | — | — |
Pseudomonas fluorescens SBW25 | 0.65 | PFLU_RS00115 | | oxygen-dependent coproporphyrinogen oxidase | 0.55 | PFLU_RS06635 | | high-affinity branched-chain amino acid ABC transporter permease LivM | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.65 | PFLU_RS00115 | | oxygen-dependent coproporphyrinogen oxidase | 0.55 | PFLU_RS06635 | | high-affinity branched-chain amino acid ABC transporter permease LivM | — | — |
Pseudomonas simiae WCS417 | 0.64 | PS417_00120 | | coproporphyrinogen III oxidase | 0.54 | PS417_06605 | | leucine/isoleucine/valine transporter permease subunit | — | — |
Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS17765 | | coproporphyrinogen III oxidase | 0.56 | HSERO_RS08280 | | leucine/isoleucine/valine transporter permease subunit | — | — |
Burkholderia phytofirmans PsJN | 0.62 | BPHYT_RS06400 | | oxygen-dependent coproporphyrinogen-III oxidase | 0.28 | BPHYT_RS31745 | | ABC transporter ATP-binding protein | low | > 109 |
Paraburkholderia graminis OAS925 | 0.62 | ABIE53_001544 | | coproporphyrinogen III oxidase | 0.28 | ABIE53_003284 | | branched-chain amino acid transport system permease protein | low | > 113 |
Cupriavidus basilensis FW507-4G11 | 0.61 | RR42_RS04725 | | coproporphyrinogen III oxidase | 0.51 | RR42_RS14415 | | leucine/isoleucine/valine transporter permease subunit | — | — |
Variovorax sp. OAS795 | 0.59 | ABID97_RS16730 | | oxygen-dependent coproporphyrinogen oxidase | 0.42 | ABID97_RS27575 | | high-affinity branched-chain amino acid ABC transporter permease LivM | — | — |
Castellaniella sp019104865 MT123 | 0.58 | ABCV34_RS02545 | | oxygen-dependent coproporphyrinogen oxidase | 0.52 | ABCV34_RS03625 | | high-affinity branched-chain amino acid ABC transporter permease LivM | 0.81 | 35 |
Bosea sp. OAE506 | 0.33 | ABIE41_RS11175 | | oxygen-dependent coproporphyrinogen oxidase | 0.19 | ABIE41_RS20030 | | branched-chain amino acid ABC transporter permease | — | — |
Not shown: 39 genomes with orthologs for HER17_RS17265 only; 1 genomes with orthologs for HER17_RS00505 only