Conservation of cofitness between HER17_RS17265 and HER17_RS00505 in Pectobacterium carotovorum WPP14

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS17265 oxygen-dependent coproporphyrinogen oxidase 1.0 HER17_RS00505 high-affinity branched-chain amino acid ABC transporter permease LivM 0.90 13
Dickeya dadantii 3937 0.81 DDA3937_RS04365 oxygen-dependent coproporphyrinogen oxidase 0.80 DDA3937_RS00670 high-affinity branched-chain amino acid ABC transporter permease LivM
Rahnella sp. WP5 0.80 EX31_RS20260 oxygen-dependent coproporphyrinogen oxidase 0.87 EX31_RS14795 high-affinity branched-chain amino acid ABC transporter permease LivM low > 89
Dickeya dianthicola 67-19 0.80 HGI48_RS04355 oxygen-dependent coproporphyrinogen oxidase 0.80 HGI48_RS20720 high-affinity branched-chain amino acid ABC transporter permease LivM low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS04275 oxygen-dependent coproporphyrinogen oxidase 0.80 DZA65_RS21730 high-affinity branched-chain amino acid ABC transporter permease LivM
Serratia liquefaciens MT49 0.78 IAI46_18545 oxygen-dependent coproporphyrinogen oxidase 0.83 IAI46_00970 high-affinity branched-chain amino acid ABC transporter permease LivM low > 86
Pantoea sp. MT58 0.76 IAI47_05360 oxygen-dependent coproporphyrinogen oxidase 0.79 IAI47_01575 high-affinity branched-chain amino acid ABC transporter permease LivM
Erwinia tracheiphila SCR3 0.75 LU632_RS06720 hemF oxygen-dependent coproporphyrinogen oxidase 0.83 LU632_RS19245 high-affinity branched-chain amino acid ABC transporter permease LivM
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF2066 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.79 GFF550 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) low > 78
Escherichia coli ECOR27 0.73 NOLOHH_13775 hemF oxygen-dependent coproporphyrinogen oxidase 0.78 NOLOHH_08545 livM branched chain amino acid ABC transporter permease LivM low > 75
Escherichia coli ECRC62 0.73 BNILDI_12640 hemF oxygen-dependent coproporphyrinogen oxidase 0.78 BNILDI_02960 livM branched chain amino acid ABC transporter permease LivM low > 75
Escherichia coli Nissle 1917 0.73 ECOLIN_RS13965 oxygen-dependent coproporphyrinogen oxidase 0.78 ECOLIN_RS19765 branched chain amino acid ABC transporter permease LivM low > 55
Escherichia coli BL21 0.73 ECD_02336 coproporphyrinogen III oxidase 0.78 ECD_03305 branched-chain amino acid ABC transporter permease low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_01286 Oxygen-dependent coproporphyrinogen-III oxidase 0.78 OHPLBJKB_00247 hypothetical protein low > 73
Escherichia coli BW25113 0.73 b2436 hemF coproporphyrinogen III oxidase (NCBI) 0.78 b3456 livM leucine/isoleucine/valine transporter subunit (NCBI) low > 76
Escherichia coli ECOR38 0.73 HEPCGN_21270 hemF oxygen-dependent coproporphyrinogen oxidase 0.78 HEPCGN_15570 livM branched chain amino acid ABC transporter permease LivM low > 87
Enterobacter sp. TBS_079 0.72 MPMX20_03323 Oxygen-dependent coproporphyrinogen-III oxidase 0.79 MPMX20_04332 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.72 EX28DRAFT_0199 coproporphyrinogen oxidase (EC 1.3.3.3) 0.78 EX28DRAFT_4288 ABC-type branched-chain amino acid transport system, permease component low > 76
Escherichia fergusonii Becca 0.72 EFB2_01443 Oxygen-dependent coproporphyrinogen-III oxidase 0.78 EFB2_00366 hypothetical protein low > 86
Escherichia coli ECRC98 0.71 JDDGAC_26045 hemF oxygen-dependent coproporphyrinogen oxidase 0.78 JDDGAC_20380 livM branched chain amino acid ABC transporter permease LivM low > 86
Escherichia coli ECRC101 0.71 MCAODC_12625 hemF oxygen-dependent coproporphyrinogen oxidase 0.78 MCAODC_07280 livM branched chain amino acid ABC transporter permease LivM low > 87
Escherichia coli ECRC102 0.71 NIAGMN_19865 hemF oxygen-dependent coproporphyrinogen oxidase 0.78 NIAGMN_14520 livM branched chain amino acid ABC transporter permease LivM
Escherichia coli ECRC100 0.71 OKFHMN_22095 hemF oxygen-dependent coproporphyrinogen oxidase 0.78 OKFHMN_16750 livM branched chain amino acid ABC transporter permease LivM low > 80
Escherichia coli ECRC99 0.71 KEDOAH_06125 hemF oxygen-dependent coproporphyrinogen oxidase 0.78 KEDOAH_11390 livM branched chain amino acid ABC transporter permease LivM
Klebsiella michiganensis M5al 0.70 BWI76_RS20740 coproporphyrinogen III oxidase 0.80 BWI76_RS26340 branched-chain amino acid ABC transporter permease low > 92
Pseudomonas stutzeri RCH2 0.67 Psest_0028 Coproporphyrinogen III oxidase 0.57 Psest_1310 ABC-type branched-chain amino acid transport system, permease component low > 67
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_1907 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.58 Pf1N1B4_3216 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_645 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.57 PfGW456L13_4609 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
Pseudomonas sp. RS175 0.66 PFR28_04656 Oxygen-dependent coproporphyrinogen-III oxidase 0.55 PFR28_00538 hypothetical protein
Pseudomonas putida KT2440 0.66 PP_0073 Coproporphyrinogen-III oxidase, aerobic 0.56 PP_1139 branched chain amino acid transporter - permease subunit
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_10665 coproporphyrinogen III oxidase 0.55 AO353_17115 leucine/isoleucine/valine transporter permease subunit
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_0024 coproporphyrinogen oxidase 0.57 Psyr_3847 L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_0024 coproporphyrinogen oxidase 0.57 Psyr_3847 L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_4129 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.56 Pf6N2E2_2924 ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, permease component 2 LivM (from data)
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_11310 coproporphyrinogen III oxidase 0.56 AO356_05330 leucine/isoleucine/valine transporter permease subunit
Pseudomonas sp. S08-1 0.66 OH686_12490 Coproporphyrinogen III oxidase, aerobic 0.58 OH686_04615 Branched-chain amino acid ABC transporter, permease protein LivM
Pseudomonas fluorescens SBW25 0.65 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase 0.55 PFLU_RS06635 high-affinity branched-chain amino acid ABC transporter permease LivM
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase 0.55 PFLU_RS06635 high-affinity branched-chain amino acid ABC transporter permease LivM
Pseudomonas simiae WCS417 0.64 PS417_00120 coproporphyrinogen III oxidase 0.54 PS417_06605 leucine/isoleucine/valine transporter permease subunit
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS17765 coproporphyrinogen III oxidase 0.56 HSERO_RS08280 leucine/isoleucine/valine transporter permease subunit
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS06400 oxygen-dependent coproporphyrinogen-III oxidase 0.28 BPHYT_RS31745 ABC transporter ATP-binding protein low > 109
Paraburkholderia graminis OAS925 0.62 ABIE53_001544 coproporphyrinogen III oxidase 0.28 ABIE53_003284 branched-chain amino acid transport system permease protein low > 113
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS04725 coproporphyrinogen III oxidase 0.51 RR42_RS14415 leucine/isoleucine/valine transporter permease subunit
Variovorax sp. OAS795 0.59 ABID97_RS16730 oxygen-dependent coproporphyrinogen oxidase 0.42 ABID97_RS27575 high-affinity branched-chain amino acid ABC transporter permease LivM
Castellaniella sp019104865 MT123 0.58 ABCV34_RS02545 oxygen-dependent coproporphyrinogen oxidase 0.52 ABCV34_RS03625 high-affinity branched-chain amino acid ABC transporter permease LivM 0.81 35
Bosea sp. OAE506 0.33 ABIE41_RS11175 oxygen-dependent coproporphyrinogen oxidase 0.19 ABIE41_RS20030 branched-chain amino acid ABC transporter permease

Not shown: 39 genomes with orthologs for HER17_RS17265 only; 1 genomes with orthologs for HER17_RS00505 only