Conservation of cofitness between HER17_RS02815 and HER17_RS00505 in Pectobacterium carotovorum WPP14

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02815 transaldolase 1.0 HER17_RS00505 high-affinity branched-chain amino acid ABC transporter permease LivM 0.87 16
Dickeya dianthicola ME23 0.93 DZA65_RS19465 transaldolase 0.80 DZA65_RS21730 high-affinity branched-chain amino acid ABC transporter permease LivM low > 75
Escherichia coli ECRC62 0.92 BNILDI_08195 transaldolase B 0.78 BNILDI_02960 livM branched chain amino acid ABC transporter permease LivM low > 75
Escherichia coli Nissle 1917 0.92 ECOLIN_RS00045 transaldolase 0.78 ECOLIN_RS19765 branched chain amino acid ABC transporter permease LivM low > 55
Escherichia coli ECRC100 0.92 OKFHMN_11080 transaldolase B 0.78 OKFHMN_16750 livM branched chain amino acid ABC transporter permease LivM low > 80
Escherichia coli ECRC98 0.92 JDDGAC_14675 transaldolase B 0.78 JDDGAC_20380 livM branched chain amino acid ABC transporter permease LivM low > 86
Escherichia coli ECRC102 0.92 NIAGMN_08930 transaldolase B 0.78 NIAGMN_14520 livM branched chain amino acid ABC transporter permease LivM — —
Escherichia fergusonii Becca 0.92 EFB2_04035 Transaldolase B 0.78 EFB2_00366 hypothetical protein low > 86
Escherichia coli ECRC101 0.92 MCAODC_01595 transaldolase B 0.78 MCAODC_07280 livM branched chain amino acid ABC transporter permease LivM low > 87
Escherichia coli ECOR38 0.92 HEPCGN_09085 transaldolase B 0.78 HEPCGN_15570 livM branched chain amino acid ABC transporter permease LivM low > 87
Escherichia coli ECRC99 0.92 KEDOAH_17075 transaldolase B 0.78 KEDOAH_11390 livM branched chain amino acid ABC transporter permease LivM — —
Escherichia coli BW25113 0.92 b0008 talB transaldolase B (NCBI) 0.78 b3456 livM leucine/isoleucine/valine transporter subunit (NCBI) low > 76
Serratia liquefaciens MT49 0.92 IAI46_03055 transaldolase 0.83 IAI46_00970 high-affinity branched-chain amino acid ABC transporter permease LivM low > 86
Dickeya dianthicola 67-19 0.92 HGI48_RS18325 transaldolase 0.80 HGI48_RS20720 high-affinity branched-chain amino acid ABC transporter permease LivM 0.72 26
Escherichia coli BL21 0.92 ECD_00008 transaldolase B 0.78 ECD_03305 branched-chain amino acid ABC transporter permease low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_03652 Transaldolase 0.78 OHPLBJKB_00247 hypothetical protein low > 73
Escherichia coli ECOR27 0.92 NOLOHH_03410 transaldolase B 0.78 NOLOHH_08545 livM branched chain amino acid ABC transporter permease LivM low > 75
Dickeya dadantii 3937 0.92 DDA3937_RS18395 transaldolase 0.80 DDA3937_RS00670 high-affinity branched-chain amino acid ABC transporter permease LivM low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF1083 Transaldolase (EC 2.2.1.2) 0.79 GFF550 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) low > 78
Rahnella sp. WP5 0.91 EX31_RS03920 transaldolase 0.87 EX31_RS14795 high-affinity branched-chain amino acid ABC transporter permease LivM low > 89
Klebsiella michiganensis M5al 0.91 BWI76_RS04270 transaldolase 0.80 BWI76_RS26340 branched-chain amino acid ABC transporter permease low > 92
Enterobacter sp. TBS_079 0.91 MPMX20_00716 Transaldolase B 0.79 MPMX20_04332 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.91 EX28DRAFT_3620 transaldolase 0.78 EX28DRAFT_4288 ABC-type branched-chain amino acid transport system, permease component low > 76
Pantoea sp. MT58 0.90 IAI47_16195 transaldolase 0.79 IAI47_01575 high-affinity branched-chain amino acid ABC transporter permease LivM low > 76
Erwinia tracheiphila SCR3 0.87 LU632_RS02630 tal transaldolase 0.83 LU632_RS19245 high-affinity branched-chain amino acid ABC transporter permease LivM low > 74
Pseudomonas fluorescens SBW25 0.59 PFLU_RS07805 transaldolase 0.55 PFLU_RS06635 high-affinity branched-chain amino acid ABC transporter permease LivM low > 109
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS07805 transaldolase 0.55 PFLU_RS06635 high-affinity branched-chain amino acid ABC transporter permease LivM low > 109
Pseudomonas simiae WCS417 0.59 PS417_07730 transaldolase 0.54 PS417_06605 leucine/isoleucine/valine transporter permease subunit — —
Pseudomonas putida KT2440 0.57 PP_2168 Transaldolase 0.56 PP_1139 branched chain amino acid transporter - permease subunit low > 96
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_00310 transaldolase 0.55 AO353_17115 leucine/isoleucine/valine transporter permease subunit low > 101
Pseudomonas stutzeri RCH2 0.56 Psest_2708 transaldolase 0.57 Psest_1310 ABC-type branched-chain amino acid transport system, permease component low > 67
Marinobacter adhaerens HP15 0.54 HP15_2241 transaldolase 0.51 HP15_3057 leucine/isoleucine/valine transporter permease subunit low > 73
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS13050 transaldolase 0.51 RR42_RS14415 leucine/isoleucine/valine transporter permease subunit low > 128
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_2258 Transaldolase (EC 2.2.1.2) 0.56 Pf6N2E2_2924 ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, permease component 2 LivM (from data) low > 103
Pseudomonas sp. S08-1 0.54 OH686_22740 transaldolase 0.58 OH686_04615 Branched-chain amino acid ABC transporter, permease protein LivM low > 80
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4009 Transaldolase (EC 2.2.1.2) 0.57 PfGW456L13_4609 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) low > 87
Pseudomonas sp. RS175 0.53 PFR28_01142 Transaldolase 0.55 PFR28_00538 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_02175 transaldolase 0.56 AO356_05330 leucine/isoleucine/valine transporter permease subunit low > 104
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_58 Transaldolase (EC 2.2.1.2) 0.58 Pf1N1B4_3216 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) low > 87
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS05500 transaldolase 0.56 HSERO_RS08280 leucine/isoleucine/valine transporter permease subunit low > 78
Bosea sp. OAE506 0.50 ABIE41_RS23900 transaldolase 0.19 ABIE41_RS20030 branched-chain amino acid ABC transporter permease low > 77
Paraburkholderia graminis OAS925 0.49 ABIE53_001416 transaldolase 0.28 ABIE53_003284 branched-chain amino acid transport system permease protein low > 113
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS06045 transaldolase 0.28 BPHYT_RS31745 ABC transporter ATP-binding protein low > 109
Variovorax sp. OAS795 0.49 ABID97_RS07095 transaldolase 0.42 ABID97_RS27575 high-affinity branched-chain amino acid ABC transporter permease LivM low > 91
Castellaniella sp019104865 MT123 0.49 ABCV34_RS15500 transaldolase 0.52 ABCV34_RS03625 high-affinity branched-chain amino acid ABC transporter permease LivM low > 48

Not shown: 19 genomes with orthologs for HER17_RS02815 only; 2 genomes with orthologs for HER17_RS00505 only