Conservation of cofitness between PS417_27710 and PS417_04910 in Pseudomonas simiae WCS417

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27710 AsnC family transcriptional regulator 1.0 PS417_04910 amino acid ABC transporter permease 0.34 3
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS29385 AsnC family transcriptional regulator 0.99 PFLU_RS04970 amino acid ABC transporter permease low > 109
Pseudomonas fluorescens SBW25 1.00 PFLU_RS29385 AsnC family transcriptional regulator 0.99 PFLU_RS04970 amino acid ABC transporter permease low > 109
Pseudomonas fluorescens FW300-N2E3 1.00 AO353_09160 AsnC family transcriptional regulator 0.92 AO353_04605 amino acid ABC transporter permease low > 101
Pseudomonas fluorescens FW300-N1B4 1.00 Pf1N1B4_2143 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.92 Pf1N1B4_915 Glutamate Aspartate transport system permease protein GltK (TC 3.A.1.3.4) 0.28 50
Pseudomonas sp. RS175 1.00 PFR28_04400 Leucine-responsive regulatory protein 0.92 PFR28_03540 Inner membrane amino-acid ABC transporter permease protein YhdY low > 88
Pseudomonas fluorescens GW456-L13 0.99 PfGW456L13_811 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.93 PfGW456L13_1700 Glutamate Aspartate transport system permease protein GltK (TC 3.A.1.3.4) 0.39 12
Pseudomonas fluorescens FW300-N2E2 0.99 Pf6N2E2_4390 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.92 Pf6N2E2_5404 ABC transporter for D-Alanine, permease component 1 (from data) 0.19 39
Pseudomonas fluorescens FW300-N2C3 0.99 AO356_12615 AsnC family transcriptional regulator 0.92 AO356_17390 amino acid ABC transporter permease low > 104
Pseudomonas putida KT2440 0.97 PP_5271 DNA-binding transcriptional dual regulator, leucine-binding 0.89 PP_1299 putative amino acid ABC transporter - membrane subunit low > 96
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_0234 transcriptional regulator, AsnC family 0.91 Psyr_1074 amino acid ABC transporter membrane protein 2, PAAT family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_0234 transcriptional regulator, AsnC family 0.91 Psyr_1074 amino acid ABC transporter membrane protein 2, PAAT family low > 86
Pseudomonas sp. S08-1 0.93 OH686_13680 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.84 OH686_17815 Amino acid ABC transporter, permease protein 2, YhdY low > 80
Pseudomonas stutzeri RCH2 0.91 Psest_3794 Transcriptional regulators 0.78 Psest_3161 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family low > 67
Castellaniella sp019104865 MT123 0.63 ABCV34_RS10805 winged helix-turn-helix transcriptional regulator 0.18 ABCV34_RS13095 amino acid ABC transporter permease low > 48
Variovorax sp. OAS795 0.61 ABID97_RS22380 winged helix-turn-helix transcriptional regulator 0.46 ABID97_RS13300 amino acid ABC transporter permease low > 91
Variovorax sp. SCN45 0.61 GFF1774 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.44 GFF4214 L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 2 AapM low > 127
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_09530 leucine-responsive transcriptional regulator Lrp 0.61 CSW01_06845 amino acid ABC transporter permease
Erwinia tracheiphila SCR3 0.59 LU632_RS09740 lrp leucine-responsive transcriptional regulator Lrp 0.66 LU632_RS19780 amino acid ABC transporter permease low > 74
Pantoea sp. MT58 0.59 IAI47_12915 leucine-responsive transcriptional regulator Lrp 0.67 IAI47_02365 amino acid ABC transporter permease low > 76
Escherichia coli BL21 0.59 ECD_00893 leucine-responsive global transcriptional regulator 0.68 ECD_03128 putative amino acid ABC transporter permease low > 60
Enterobacter sp. TBS_079 0.59 MPMX20_01551 Leucine-responsive regulatory protein 0.65 MPMX20_04179 Inner membrane amino-acid ABC transporter permease protein YhdY low > 85
Escherichia fergusonii Becca 0.59 EFB2_03172 Leucine-responsive regulatory protein 0.67 EFB2_00553 Inner membrane amino-acid ABC transporter permease protein YhdY low > 86
Escherichia coli ECRC102 0.59 NIAGMN_03295 lrp leucine-responsive transcriptional regulator Lrp 0.68 NIAGMN_15385 yhdY Inner membrane amino-acid ABC transporter permease protein YhdY
Escherichia coli ECOR27 0.59 NOLOHH_22145 lrp leucine-responsive transcriptional regulator Lrp 0.68 NOLOHH_09415 yhdY Inner membrane amino-acid ABC transporter permease protein YhdY low > 57
Dickeya dianthicola 67-19 0.59 HGI48_RS09605 leucine-responsive transcriptional regulator Lrp 0.65 HGI48_RS01245 amino acid ABC transporter permease low > 71
Escherichia coli ECRC101 0.59 OKFHMN_05575 lrp leucine-responsive transcriptional regulator Lrp 0.68 OKFHMN_17625 yhdY Inner membrane amino-acid ABC transporter permease protein YhdY
Escherichia coli ECRC101 0.59 MCAODC_24965 lrp leucine-responsive transcriptional regulator Lrp 0.68 MCAODC_08145 yhdY Inner membrane amino-acid ABC transporter permease protein YhdY
Pectobacterium carotovorum WPP14 0.59 HER17_RS12360 leucine-responsive transcriptional regulator Lrp 0.65 HER17_RS20300 amino acid ABC transporter permease low > 75
Escherichia coli BW25113 0.59 b0889 lrp DNA-binding transcriptional dual regulator, leucine-binding (NCBI) 0.67 b3270 yhdY putative transport system permease protein (VIMSS) low > 76
Enterobacter asburiae PDN3 0.59 EX28DRAFT_2043 transcriptional regulator, AsnC family 0.67 EX28DRAFT_3323 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family low > 76
Dickeya dianthicola ME23 0.59 DZA65_RS09915 leucine-responsive transcriptional regulator Lrp 0.65 DZA65_RS01290 amino acid ABC transporter permease low > 75
Escherichia coli Nissle 1917 0.59 ECOLIN_RS04730 leucine-responsive transcriptional regulator Lrp 0.64 ECOLIN_RS18785 amino acid ABC transporter permease low > 52
Escherichia coli ECRC62 0.59 BNILDI_20400 lrp leucine-responsive transcriptional regulator Lrp 0.68 BNILDI_02105 yhdY Inner membrane amino-acid ABC transporter permease protein YhdY
Dickeya dadantii 3937 0.59 DDA3937_RS09590 leucine-responsive transcriptional regulator Lrp 0.64 DDA3937_RS01260 amino acid ABC transporter permease low > 74
Escherichia coli ECOR38 0.59 HEPCGN_22935 lrp leucine-responsive transcriptional regulator Lrp 0.67 HEPCGN_16445 yhdY Inner membrane amino-acid ABC transporter permease protein YhdY low > 85
Escherichia coli ECRC99 0.59 KEDOAH_22160 lrp leucine-responsive transcriptional regulator Lrp 0.68 KEDOAH_10525 yhdY Inner membrane amino-acid ABC transporter permease protein YhdY
Rahnella sp. WP5 0.59 EX31_RS18530 leucine-responsive transcriptional regulator Lrp 0.67 EX31_RS12145 amino acid ABC transporter permease low > 89
Azospirillum brasilense Sp245 0.54 AZOBR_RS23685 AsnC family transcriptional regulator 0.50 AZOBR_RS08665 amino acid ABC transporter permease 0.24 24
Bosea sp. OAE506 0.52 ABIE41_RS07920 Lrp/AsnC ligand binding domain-containing protein 0.44 ABIE41_RS04350 amino acid ABC transporter permease low > 77
Sinorhizobium meliloti 1021 0.51 SMc00681 leucine-responsive regulatory protein 0.50 SMc02120 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, permease component 2 (from data) low > 103
Azospirillum sp. SherDot2 0.47 MPMX19_03947 Leucine-responsive regulatory protein 0.50 MPMX19_01336 Inner membrane amino-acid ABC transporter permease protein YhdY low > 112
Marinobacter adhaerens HP15 0.43 HP15_2690 transcriptional regulator, AsnC family 0.62 HP15_2194 amino acid ABC transporter, permease protein low > 73
Agrobacterium fabrum C58 0.41 Atu4159 AsnC family transcriptional regulator 0.54 Atu1579 ABC transporter, membrane spanning protein (amino acid) low > 89
Rhizobium sp. OAE497 0.39 ABIE40_RS23450 Lrp/AsnC family transcriptional regulator 0.51 ABIE40_RS08805 amino acid ABC transporter permease low > 107
Phaeobacter inhibens DSM 17395 0.37 PGA1_c11760 putative proline dehydrogenase transcriptional activator 0.34 PGA1_c02000 glutamate/glutamine/aspartate/asparagine transport system permease protein BztC low > 62

Not shown: 33 genomes with orthologs for PS417_27710 only; 3 genomes with orthologs for PS417_04910 only