Conservation of cofitness between PS417_28050 and PS417_03990 in Pseudomonas simiae WCS417

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_28050 hypothetical protein 1.0 PS417_03990 ligand-gated channel protein 0.44 19
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_09865 hypothetical protein 0.64 AO353_05460 ligand-gated channel protein low > 101
Pseudomonas sp. RS175 0.91 PFR28_04481 hypothetical protein 0.65 PFR28_00110 putative TonB-dependent receptor BfrD low > 88
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_760 Phosphate regulon metal ion transporter containing CBS domains 0.63 PfGW456L13_5070 Ferrichrome-iron receptor low > 87
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_2042 Phosphate regulon metal ion transporter containing CBS domains 0.49 Pf1N1B4_1141 Ferrichrome-iron receptor low > 87
Pseudomonas putida KT2440 0.85 PP_5322 putative metal ion transporter 0.63 PP_0861 outer membrane ferric siderophore receptor low > 96
Pseudomonas stutzeri RCH2 0.81 Psest_3847 Hemolysins and related proteins containing CBS domains 0.48 Psest_3347 TonB-dependent siderophore receptor low > 67
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_06055 Hemolysin, contains CBS domains 0.21 H281DRAFT_02286 catecholate siderophore receptor low > 103
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS05435 hemolysin protein 0.24 HSERO_RS16285 catecholate siderophore receptor Fiu low > 78
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS33815 hypothetical protein 0.21 BPHYT_RS35155 TonB-denpendent receptor low > 109
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS17705 hemolysin family protein 0.21 QEN71_RS10175 TonB-dependent siderophore receptor low > 153
Paraburkholderia graminis OAS925 0.42 ABIE53_004821 CBS domain containing-hemolysin-like protein 0.21 ABIE53_000376 catecholate siderophore receptor low > 113
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.3404.1 FIG01211089: hypothetical protein 0.24 Xcc-8004.1694.1 Ferrichrome-iron receptor low > 74
Rhodopseudomonas palustris CGA009 0.27 TX73_002605 hemolysin family protein 0.23 TX73_018010 TonB-dependent receptor low > 86
Shewanella oneidensis MR-1 0.17 SO2815 CBS domain protein (NCBI ptt file) 0.39 SO3914 TonB-dependent receptor, putative (NCBI ptt file) low > 76
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS19900 hemolysin family protein 0.26 ABZR86_RS09175 catecholate siderophore receptor Fiu low > 74
Rhodanobacter sp. FW510-T8 0.15 OKGIIK_02350 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family 0.20 OKGIIK_11115 fiu Outer membrane receptor for monomeric catechols low > 52
Lysobacter sp. OAE881 0.15 ABIE51_RS06575 hemolysin family protein 0.23 ABIE51_RS15760 TonB-dependent receptor — —
Rhodanobacter denitrificans MT42 0.14 LRK55_RS12675 hemolysin family protein 0.20 LRK55_RS04010 TonB-dependent siderophore receptor low > 63
Rhodanobacter denitrificans FW104-10B01 0.14 LRK54_RS12975 hemolysin family protein 0.19 LRK54_RS04240 TonB-dependent siderophore receptor low > 59
Variovorax sp. SCN45 0.13 GFF2520 UPF0053 inner membrane protein YtfL 0.43 GFF5863 Ferrichrome-iron receptor low > 127
Variovorax sp. OAS795 0.13 ABID97_RS07170 hemolysin family protein 0.14 ABID97_RS10775 TonB-dependent receptor low > 91
Klebsiella michiganensis M5al 0.12 BWI76_RS02765 membrane protein 0.24 BWI76_RS08945 catecholate siderophore receptor Fiu low > 92
Escherichia coli ECRC101 0.12 MCAODC_02530 paeA Polyamine export protein 0.24 MCAODC_25455 fiu catecholate siderophore receptor Fiu — —
Escherichia coli ECRC102 0.12 NIAGMN_09865 paeA Polyamine export protein 0.24 NIAGMN_04285 fiu catecholate siderophore receptor Fiu — —
Escherichia coli BW25113 0.12 b4218 ytfL predicted inner membrane protein (NCBI) 0.24 b0805 fiu predicted iron outer membrane transporter (NCBI) low > 76
Escherichia coli ECOR27 0.12 NOLOHH_04280 paeA Polyamine export protein 0.24 NOLOHH_22590 fiu catecholate siderophore receptor Fiu low > 57
Escherichia coli ECOR38 0.12 HEPCGN_10215 paeA Polyamine export protein 0.24 HEPCGN_01800 fiu catecholate siderophore receptor Fiu low > 85
Escherichia coli ECRC99 0.12 KEDOAH_16140 paeA Polyamine export protein 0.24 KEDOAH_21670 fiu catecholate siderophore receptor Fiu — —
Escherichia coli BL21 0.12 ECD_04089 UPF0053 family inner membrane protein 0.24 ECD_00772 catecholate siderophore receptor low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.12 OHPLBJKB_03816 hypothetical protein 0.24 OHPLBJKB_02908 Catecholate siderophore receptor Fiu low > 73
Escherichia coli Nissle 1917 0.12 ECOLIN_RS24495 hemolysin family protein 0.24 ECOLIN_RS04285 catecholate siderophore receptor Fiu — —
Escherichia coli ECRC101 0.12 OKFHMN_12015 paeA Polyamine export protein 0.24 OKFHMN_06240 fiu catecholate siderophore receptor Fiu — —
Escherichia coli ECRC98 0.12 JDDGAC_15655 paeA Polyamine export protein 0.24 JDDGAC_09875 fiu catecholate siderophore receptor Fiu — —
Escherichia coli ECRC62 0.12 BNILDI_07240 tlyC Polyamine export protein 0.24 BNILDI_20870 fiu catecholate siderophore receptor Fiu — —
Escherichia fergusonii Becca 0.12 EFB2_04311 hypothetical protein 0.24 EFB2_03300 Catecholate siderophore receptor Fiu low > 86
Shewanella sp. ANA-3 0.11 Shewana3_0353 hypothetical protein (RefSeq) 0.39 Shewana3_0716 TonB-dependent siderophore receptor (RefSeq) low > 73

Not shown: 31 genomes with orthologs for PS417_28050 only; 12 genomes with orthologs for PS417_03990 only