Conservation of cofitness between GFF1737 and GFF553 in Variovorax sp. SCN45

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF1737 Carbon starvation protein A 1.0 GFF553 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.62 11
Variovorax sp. OAS795 0.95 ABID97_RS22455 carbon starvation CstA family protein 0.95 ABID97_RS17860 peptidylprolyl isomerase low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.85 GFF3273 Carbon starvation protein A 0.84 GFF5146 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) low > 90
Ralstonia solanacearum GMI1000 0.81 RS_RS00110 carbon starvation protein A 0.70 RS_RS05800 cyclophilin — —
Ralstonia solanacearum PSI07 0.81 RPSI07_RS23840 carbon starvation protein A 0.70 RPSI07_RS18390 cyclophilin — —
Ralstonia solanacearum UW163 0.81 UW163_RS04070 carbon starvation protein A 0.69 UW163_RS12455 cyclophilin — —
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS09510 carbon starvation protein A 0.69 RALBFv3_RS14985 cyclophilin low > 76
Ralstonia sp. UNC404CL21Col 0.80 ABZR87_RS05220 carbon starvation CstA family protein 0.69 ABZR87_RS10630 peptidylprolyl isomerase low > 80
Cupriavidus basilensis FW507-4G11 0.80 RR42_RS20515 large component of pyruvate transporter (cstA-like) (from data) 0.73 RR42_RS06335 cyclophilin low > 128
Herbaspirillum seropedicae SmR1 0.76 HSERO_RS09795 carbon starvation protein A 0.65 HSERO_RS09310 cyclophilin — —
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS32880 carbon starvation CstA family protein 0.72 QEN71_RS06115 peptidylprolyl isomerase low > 153
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_13990 carbon starvation protein A 0.64 AO353_27825 peptidylprolyl isomerase low > 101
Pseudomonas sp. RS175 0.73 PFR28_03790 Pyruvate/proton symporter BtsT 0.60 PFR28_02745 Peptidyl-prolyl cis-trans isomerase cyp18 — —
Pseudomonas simiae WCS417 0.72 PS417_24295 carbon starvation protein A 0.61 PS417_16900 peptidylprolyl isomerase — —
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_4835 Carbon starvation protein A 0.61 Pf1N1B4_4004 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) low > 87
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS26210 carbon starvation protein A 0.61 PFLU_RS18885 peptidyl-prolyl cis-trans isomerase low > 109
Pseudomonas fluorescens SBW25 0.72 PFLU_RS26210 carbon starvation protein A 0.61 PFLU_RS18885 peptidyl-prolyl cis-trans isomerase low > 109
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_4273 Carbon starvation protein CstA 0.61 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_4273 Carbon starvation protein CstA 0.61 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type low > 86
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_25680 carbon starvation protein A 0.60 AO356_01015 peptidylprolyl isomerase — —
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_1294 Carbon starvation protein A 0.60 Pf6N2E2_151 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) — —
Pseudomonas sp. S08-1 0.72 OH686_16210 Carbon starvation protein A 0.62 OH686_03750 Peptidyl-prolyl cis-trans isomerase PpiB low > 80
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_1444 Carbon starvation protein A 0.63 PfGW456L13_2608 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) low > 87
Pseudomonas putida KT2440 0.71 PP_4641 putative transporter 0.64 PP_2903 peptidyl-prolyl cis-trans isomerase B (rotamase B) low > 96
Enterobacter sp. TBS_079 0.71 MPMX20_01255 Peptide transporter CstA 0.60 MPMX20_01101 Peptidyl-prolyl cis-trans isomerase B low > 85
Escherichia coli ECRC62 0.71 BNILDI_21935 cstA pyruvate/proton symporter CstA 0.59 BNILDI_22245 ppiB peptidylprolyl isomerase B — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF4505 Carbon starvation protein A 0.60 GFF4441 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) — —
Escherichia coli ECRC100 0.71 OKFHMN_07550 cstA pyruvate/proton symporter CstA 0.59 OKFHMN_07825 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECRC102 0.71 NIAGMN_05605 cstA pyruvate/proton symporter CstA 0.59 NIAGMN_05880 ppiB peptidylprolyl isomerase B — —
Escherichia coli Nissle 1917 0.71 ECOLIN_RS03280 pyruvate/proton symporter CstA 0.59 ECOLIN_RS03045 peptidylprolyl isomerase B — —
Escherichia coli ECRC99 0.71 KEDOAH_20420 cstA pyruvate/proton symporter CstA 0.59 KEDOAH_20145 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECRC98 0.71 JDDGAC_11195 cstA pyruvate/proton symporter CstA 0.59 JDDGAC_11475 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECOR38 0.71 HEPCGN_00730 cstA pyruvate/proton symporter CstA 0.59 HEPCGN_06465 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECRC101 0.71 MCAODC_26765 cstA pyruvate/proton symporter CstA 0.59 MCAODC_27045 ppiB peptidylprolyl isomerase B — —
Enterobacter asburiae PDN3 0.71 EX28DRAFT_2369 Carbon starvation protein, predicted membrane protein 0.60 EX28DRAFT_2455 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_03108 Peptide transporter CstA 0.59 OHPLBJKB_03156 Peptidyl-prolyl cis-trans isomerase B — —
Escherichia coli BW25113 0.71 b0598 cstA carbon starvation protein (NCBI) 0.59 b0525 ppiB peptidyl-prolyl cis-trans isomerase B (rotamase B) (NCBI) — —
Escherichia fergusonii Becca 0.71 EFB2_03494 Peptide transporter CstA 0.59 EFB2_03536 Peptidyl-prolyl cis-trans isomerase B — —
Escherichia coli ECOR27 0.71 NOLOHH_23925 cstA pyruvate/proton symporter CstA 0.59 NOLOHH_00815 ppiB peptidylprolyl isomerase B — —
Klebsiella michiganensis M5al 0.70 BWI76_RS07775 carbon starvation protein A 0.61 BWI76_RS07085 peptidyl-prolyl cis-trans isomerase — —
Rahnella sp. WP5 0.67 EX31_RS17455 carbon starvation protein A 0.62 EX31_RS22640 peptidylprolyl isomerase B — —
Pantoea sp. MT58 0.67 IAI47_09315 carbon starvation protein A 0.62 IAI47_14340 peptidylprolyl isomerase B — —
Serratia liquefaciens MT49 0.67 IAI46_13875 carbon starvation protein A 0.60 IAI46_05385 peptidylprolyl isomerase B low > 86
Pectobacterium carotovorum WPP14 0.67 HER17_RS09410 carbon starvation protein A 0.59 HER17_RS06485 peptidylprolyl isomerase B — —
Acinetobacter radioresistens SK82 0.66 MPMX26_01068 Peptide transporter CstA 0.65 MPMX26_01727 Peptidyl-prolyl cis-trans isomerase cyp18 low > 36
Dickeya dianthicola ME23 0.66 DZA65_RS13005 carbon starvation protein A 0.58 DZA65_RS15980 peptidylprolyl isomerase B — —
Dickeya dadantii 3937 0.66 DDA3937_RS12500 carbon starvation protein A 0.58 DDA3937_RS15095 peptidylprolyl isomerase B — —
Dickeya dianthicola 67-19 0.65 HGI48_RS12555 carbon starvation protein A 0.58 HGI48_RS15175 peptidylprolyl isomerase B low > 71
Escherichia coli BL21 0.65 ECD_04220 putative transporter 0.59 ECD_00475 peptidyl-prolyl cis-trans isomerase B (rotamase B) — —
Erwinia tracheiphila SCR3 0.62 LU632_RS20450 carbon starvation protein A 0.61 LU632_RS15235 ppiB peptidylprolyl isomerase B — —
Castellaniella sp019104865 MT123 0.52 ABCV34_RS10765 carbon starvation CstA family protein 0.71 ABCV34_RS00375 peptidylprolyl isomerase low > 48

Not shown: 12 genomes with orthologs for GFF1737 only; 14 genomes with orthologs for GFF553 only