Conservation of cofitness between PS417_26335 and PS417_26340 in Pseudomonas simiae WCS417

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_26335 BetI family transcriptional regulator 1.0 PS417_26340 betaine-aldehyde dehydrogenase 0.41 1
Pseudomonas fluorescens SBW25 0.97 PFLU_RS27985 transcriptional regulator BetI 0.99 PFLU_RS27990 betaine-aldehyde dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS27985 transcriptional regulator BetI 0.99 PFLU_RS27990 betaine-aldehyde dehydrogenase 0.32 2
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_4734 transcriptional regulator, TetR family 0.89 Psyr_4733 betaine aldehyde dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_4734 transcriptional regulator, TetR family 0.89 Psyr_4733 betaine aldehyde dehydrogenase low > 86
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_07800 transcriptional repressor BetI 0.93 AO353_07805 betaine-aldehyde dehydrogenase 0.67 3
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_1084 HTH-type transcriptional regulator BetI 0.93 PfGW456L13_1083 Betaine aldehyde dehydrogenase (EC 1.2.1.8) 0.46 3
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_2418 HTH-type transcriptional regulator BetI 0.94 Pf1N1B4_2417 Betaine aldehyde dehydrogenase (EC 1.2.1.8) 0.32 6
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_13800 transcriptional repressor BetI 0.93 AO356_13795 betaine-aldehyde dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_4680 HTH-type transcriptional regulator BetI 0.93 Pf6N2E2_4679 Betaine aldehyde dehydrogenase (EC 1.2.1.8) low > 103
Pseudomonas putida KT2440 0.87 PP_5719 choline-responsive transcriptional repressor BetI 0.88 PP_5063 betaine aldehyde dehydrogenase, NAD-dependent low > 96
Pseudomonas sp. RS175 0.83 PFR28_04166 HTH-type transcriptional regulator BetI 0.93 PFR28_04167 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.37 6
Pectobacterium carotovorum WPP14 0.67 HER17_RS08385 transcriptional regulator BetI 0.77 HER17_RS08390 betaine-aldehyde dehydrogenase low > 75
Rahnella sp. WP5 0.64 EX31_RS18825 transcriptional regulator BetI 0.78 EX31_RS18820 betaine-aldehyde dehydrogenase low > 89
Serratia liquefaciens MT49 0.64 IAI46_07710 transcriptional regulator BetI 0.83 IAI46_07715 betaine-aldehyde dehydrogenase low > 86
Dickeya dadantii 3937 0.62 DDA3937_RS13270 transcriptional regulator BetI 0.72 DDA3937_RS13265 betaine-aldehyde dehydrogenase low > 74
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS08180 transcriptional regulator BetI 0.71 QEN71_RS08175 betaine-aldehyde dehydrogenase low > 153
Pantoea sp. MT58 0.55 IAI47_08655 transcriptional regulator BetI 0.77 IAI47_08650 betaine-aldehyde dehydrogenase low > 76
Klebsiella michiganensis M5al 0.55 BWI76_RS07620 transcriptional regulator BetI 0.77 BWI76_RS07615 betaine-aldehyde dehydrogenase low > 92
Enterobacter asburiae PDN3 0.54 EX28DRAFT_2386 transcriptional regulator, TetR family 0.78 EX28DRAFT_2387 betaine-aldehyde dehydrogenase low > 76
Enterobacter sp. TBS_079 0.54 MPMX20_01230 HTH-type transcriptional regulator BetI 0.79 MPMX20_01229 NAD/NADP-dependent betaine aldehyde dehydrogenase low > 85
Acinetobacter radioresistens SK82 0.52 MPMX26_02370 HTH-type transcriptional regulator BetI 0.77 MPMX26_02369 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.80 4
Escherichia coli BW25113 0.52 b0313 betI probably transcriptional repressor of bet genes (VIMSS) 0.77 b0312 betB betaine aldehyde dehydrogenase, NAD-dependent (NCBI) low > 76
Escherichia fergusonii Becca 0.52 EFB2_03722 HTH-type transcriptional regulator BetI 0.77 EFB2_03723 NAD/NADP-dependent betaine aldehyde dehydrogenase low > 86
Escherichia coli ECOR27 0.52 NOLOHH_01890 betI transcriptional regulator BetI 0.77 NOLOHH_01895 betB betaine-aldehyde dehydrogenase low > 57
Escherichia coli ECRC62 0.52 BNILDI_00015 betI transcriptional regulator BetI 0.77 BNILDI_00020 betB betaine-aldehyde dehydrogenase — —
Escherichia coli ECRC102 0.52 NIAGMN_07095 betI transcriptional regulator BetI 0.77 NIAGMN_07100 betB betaine-aldehyde dehydrogenase — —
Escherichia coli ECRC98 0.52 JDDGAC_12690 betI transcriptional regulator BetI 0.77 JDDGAC_12695 betB betaine-aldehyde dehydrogenase — —
Escherichia coli ECRC101 0.52 OKFHMN_09040 betI transcriptional regulator BetI 0.77 OKFHMN_09045 betB betaine-aldehyde dehydrogenase — —
Escherichia coli ECRC101 0.52 MCAODC_28265 betI transcriptional regulator BetI 0.77 MCAODC_28270 betB betaine-aldehyde dehydrogenase — —
Escherichia coli ECRC99 0.52 KEDOAH_18925 betI transcriptional regulator BetI 0.77 KEDOAH_18920 betB betaine-aldehyde dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_03362 HTH-type transcriptional regulator BetI 0.77 OHPLBJKB_03363 NAD/NADP-dependent betaine aldehyde dehydrogenase low > 73
Escherichia coli Nissle 1917 0.52 ECOLIN_RS02060 transcriptional regulator BetI 0.77 ECOLIN_RS02055 betaine-aldehyde dehydrogenase low > 52
Escherichia coli BL21 0.52 ECD_00269 choline-inducible betIBA-betT divergent operon transcriptional repressor 0.77 ECD_00268 betaine aldehyde dehydrogenase, NAD-dependent low > 60
Escherichia coli ECOR38 0.51 HEPCGN_07600 betI transcriptional regulator BetI 0.77 HEPCGN_07605 betB betaine-aldehyde dehydrogenase low > 85
Paraburkholderia graminis OAS925 0.51 ABIE53_006147 TetR/AcrR family transcriptional repressor of bet genes 0.72 ABIE53_006148 betaine-aldehyde dehydrogenase low > 113
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS25165 HTH-type transcriptional regulator BetI 0.73 BPHYT_RS25160 NAD/NADP-dependent betaine aldehyde dehydrogenase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_02465 transcriptional regulator, TetR family 0.73 H281DRAFT_02464 betaine aldehyde dehydrogenase low > 103
Marinobacter adhaerens HP15 0.45 HP15_3627 transcriptional regulator, TetR family 0.57 HP15_3626 betaine aldehyde dehydrogenase 0.75 3
Azospirillum sp. SherDot2 0.43 MPMX19_05235 HTH-type transcriptional regulator BetI 0.69 MPMX19_01458 NAD/NADP-dependent betaine aldehyde dehydrogenase low > 112
Alteromonas macleodii MIT1002 0.40 MIT1002_01124 Fatty acid metabolism regulator protein 0.58 MIT1002_02908 Betaine aldehyde dehydrogenase low > 70
Phaeobacter inhibens DSM 17395 0.30 PGA1_c21700 HTH-type transcriptional regulator 0.53 PGA1_c21670 betaine aldehyde dehydrogenase BetB low > 62
Sinorhizobium meliloti 1021 0.27 SMc00095 transcriptional regulator BetI 0.50 SMc00094 betaine aldehyde dehydrogenase 0.36 3
Agrobacterium fabrum C58 0.25 Atu2059 transcriptional regulator, TetR family 0.51 Atu0829 betaine aldehyde dehydrogenase low > 89

Not shown: 0 genomes with orthologs for PS417_26335 only; 6 genomes with orthologs for PS417_26340 only