Conservation of cofitness between PS417_26335 and PS417_02485 in Pseudomonas simiae WCS417

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_26335 BetI family transcriptional regulator 1.0 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase 0.19 6
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS27985 transcriptional regulator BetI 0.98 PFLU_RS02565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 109
Pseudomonas fluorescens SBW25 0.97 PFLU_RS27985 transcriptional regulator BetI 0.98 PFLU_RS02565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_4734 transcriptional regulator, TetR family 0.85 Psyr_0571 tRNA isopentenyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_4734 transcriptional regulator, TetR family 0.85 Psyr_0571 tRNA isopentenyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_07800 transcriptional repressor BetI 0.89 AO353_13140 tRNA dimethylallyltransferase 0.23 61
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_1084 HTH-type transcriptional regulator BetI 0.88 PfGW456L13_155 tRNA dimethylallyltransferase (EC 2.5.1.75) low > 87
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_2418 HTH-type transcriptional regulator BetI 0.88 Pf1N1B4_1413 tRNA dimethylallyltransferase (EC 2.5.1.75) — —
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_13800 transcriptional repressor BetI 0.87 AO356_08660 tRNA dimethylallyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_4680 HTH-type transcriptional regulator BetI 0.87 Pf6N2E2_3615 tRNA dimethylallyltransferase (EC 2.5.1.75) — —
Pseudomonas putida KT2440 0.87 PP_5719 choline-responsive transcriptional repressor BetI 0.77 PP_4895 tRNA dimethylallyltransferase low > 96
Pseudomonas sp. RS175 0.83 PFR28_04166 HTH-type transcriptional regulator BetI 0.86 PFR28_05120 tRNA dimethylallyltransferase low > 88
Pectobacterium carotovorum WPP14 0.67 HER17_RS08385 transcriptional regulator BetI 0.58 HER17_RS02580 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Rahnella sp. WP5 0.64 EX31_RS18825 transcriptional regulator BetI 0.58 EX31_RS08825 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 89
Serratia liquefaciens MT49 0.64 IAI46_07710 transcriptional regulator BetI 0.57 IAI46_01620 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 86
Dickeya dadantii 3937 0.62 DDA3937_RS13270 transcriptional regulator BetI 0.58 DDA3937_RS18615 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 74
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS08180 transcriptional regulator BetI 0.50 QEN71_RS26440 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Pantoea sp. MT58 0.55 IAI47_08655 transcriptional regulator BetI 0.57 IAI47_02585 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 76
Klebsiella michiganensis M5al 0.55 BWI76_RS07620 transcriptional regulator BetI 0.59 BWI76_RS02530 tRNA dimethylallyltransferase low > 92
Enterobacter asburiae PDN3 0.54 EX28DRAFT_2386 transcriptional regulator, TetR family 0.59 EX28DRAFT_3368 tRNA dimethylallyltransferase low > 76
Enterobacter sp. TBS_079 0.54 MPMX20_01230 HTH-type transcriptional regulator BetI 0.58 MPMX20_00452 tRNA dimethylallyltransferase low > 85
Acinetobacter radioresistens SK82 0.52 MPMX26_02370 HTH-type transcriptional regulator BetI 0.43 MPMX26_01208 tRNA dimethylallyltransferase — —
Escherichia coli BW25113 0.52 b0313 betI probably transcriptional repressor of bet genes (VIMSS) 0.59 b4171 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) low > 76
Escherichia fergusonii Becca 0.52 EFB2_03722 HTH-type transcriptional regulator BetI 0.59 EFB2_04364 tRNA dimethylallyltransferase low > 86
Escherichia coli ECOR27 0.52 NOLOHH_01890 betI transcriptional regulator BetI 0.59 NOLOHH_04525 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli ECRC98 0.52 JDDGAC_12690 betI transcriptional regulator BetI 0.59 JDDGAC_15900 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_03362 HTH-type transcriptional regulator BetI 0.59 OHPLBJKB_03871 tRNA dimethylallyltransferase — —
Escherichia coli ECRC102 0.52 NIAGMN_07095 betI transcriptional regulator BetI 0.59 NIAGMN_10110 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli ECRC99 0.52 KEDOAH_18925 betI transcriptional regulator BetI 0.59 KEDOAH_15895 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli ECRC62 0.52 BNILDI_00015 betI transcriptional regulator BetI 0.59 BNILDI_06965 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli ECRC101 0.52 OKFHMN_09040 betI transcriptional regulator BetI 0.59 OKFHMN_12260 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli Nissle 1917 0.52 ECOLIN_RS02060 transcriptional regulator BetI 0.59 ECOLIN_RS24225 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 52
Escherichia coli ECRC101 0.52 MCAODC_28265 betI transcriptional regulator BetI 0.59 MCAODC_02775 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli BL21 0.52 ECD_00269 choline-inducible betIBA-betT divergent operon transcriptional repressor 0.59 ECD_04038 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase low > 60
Escherichia coli ECOR38 0.51 HEPCGN_07600 betI transcriptional regulator BetI 0.59 HEPCGN_10490 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 85
Paraburkholderia graminis OAS925 0.51 ABIE53_006147 TetR/AcrR family transcriptional repressor of bet genes 0.51 ABIE53_000875 tRNA dimethylallyltransferase low > 113
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS25165 HTH-type transcriptional regulator BetI 0.49 BPHYT_RS03645 tRNA dimethylallyltransferase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_02465 transcriptional regulator, TetR family 0.51 H281DRAFT_04711 tRNA dimethylallyltransferase — —
Marinobacter adhaerens HP15 0.45 HP15_3627 transcriptional regulator, TetR family 0.56 HP15_2500 tRNA delta(2)-isopentenylpyrophosphate transferase — —
Azospirillum sp. SherDot2 0.43 MPMX19_05235 HTH-type transcriptional regulator BetI 0.22 MPMX19_01778 tRNA dimethylallyltransferase — —
Alteromonas macleodii MIT1002 0.40 MIT1002_01124 Fatty acid metabolism regulator protein 0.56 MIT1002_03789 tRNA dimethylallyltransferase — —
Phaeobacter inhibens DSM 17395 0.30 PGA1_c21700 HTH-type transcriptional regulator 0.18 PGA1_c14200 tRNA delta(2)-isopentenylpyrophosphate transferase MiaA — —
Sinorhizobium meliloti 1021 0.27 SMc00095 transcriptional regulator BetI 0.28 SMc01435 tRNA delta(2)-isopentenylpyrophosphate transferase — —
Agrobacterium fabrum C58 0.25 Atu2059 transcriptional regulator, TetR family 0.26 Atu2039 tRNA delta(2)-isopentenylpyrophosphate — —

Not shown: 0 genomes with orthologs for PS417_26335 only; 58 genomes with orthologs for PS417_02485 only