Conservation of cofitness between PS417_07150 and PS417_00245 in Pseudomonas simiae WCS417

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_07150 permase 1.0 PS417_00245 oligopeptidase A 0.25 19
Pseudomonas fluorescens SBW25 0.99 PFLU_RS07260 AI-2E family transporter 0.99 PFLU_RS00240 oligopeptidase A low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS07260 AI-2E family transporter 0.99 PFLU_RS00240 oligopeptidase A low > 109
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_3329 Putative permease PerM (= YfgO) 0.94 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) low > 87
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_2750 Putative permease PerM (= YfgO) 0.93 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) low > 103
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_04545 permease 0.93 AO356_11120 oligopeptidase A low > 104
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_4510 Putative permease PerM (= YfgO) 0.93 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) low > 87
Pseudomonas sp. RS175 0.84 PFR28_00696 hypothetical protein 0.92 PFR28_04699 Oligopeptidase A low > 88
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_1545 Protein of unknown function UPF0118 0.91 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A low > 86
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_17655 permease 0.93 AO353_10775 oligopeptidase A low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_1545 Protein of unknown function UPF0118 0.91 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A low > 86
Pseudomonas putida KT2440 0.79 PP_1234 putative permease 0.90 PP_0096 oligopeptidase A low > 96
Pseudomonas stutzeri RCH2 0.72 Psest_1512 Predicted permease 0.80 Psest_4320 Zn-dependent oligopeptidases low > 67
Marinobacter adhaerens HP15 0.51 HP15_2029 permease perM 0.56 HP15_3759 oligopeptidase A-like protein low > 73
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_2441 Predicted permease 0.55 B158DRAFT_0457 Zn-dependent oligopeptidases low > 40
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_10775 AI-2E family transporter 0.57 CSW01_01010 oligopeptidase A low > 62
Enterobacter asburiae PDN3 0.46 EX28DRAFT_0179 Predicted permease 0.57 EX28DRAFT_4063 Zn-dependent oligopeptidases low > 76
Klebsiella michiganensis M5al 0.46 BWI76_RS20920 AI-2E family transporter 0.57 BWI76_RS26610 oligopeptidase A low > 92
Enterobacter sp. TBS_079 0.46 MPMX20_03343 Putative transport protein YhhT 0.57 MPMX20_04397 Oligopeptidase A low > 85
Escherichia fergusonii Becca 0.45 EFB2_01405 Putative transport protein YhhT 0.57 EFB2_00317 Oligopeptidase A low > 86
Escherichia coli ECRC98 0.45 JDDGAC_25785 perM Putative permease PerM 0.57 JDDGAC_20045 prlC oligopeptidase A — —
Escherichia coli ECRC99 0.45 KEDOAH_06380 perM Putative permease PerM 0.57 KEDOAH_11730 prlC oligopeptidase A — —
Escherichia coli BW25113 0.45 b2493 yfgO predicted inner membrane protein (NCBI) 0.57 b3498 prlC oligopeptidase A (NCBI) low > 76
Escherichia coli Nissle 1917 0.45 ECOLIN_RS14160 AI-2E family transporter 0.57 ECOLIN_RS19985 oligopeptidase A low > 52
Escherichia coli ECRC101 0.45 OKFHMN_21840 perM Putative permease PerM 0.57 OKFHMN_16415 prlC oligopeptidase A — —
Escherichia coli ECOR27 0.45 NOLOHH_13490 perM Putative permease PerM 0.57 NOLOHH_08350 prlC oligopeptidase A low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_01233 Putative transport protein YhhT 0.57 OHPLBJKB_00205 Oligopeptidase A low > 73
Escherichia coli ECOR38 0.45 HEPCGN_21005 perM Putative permease PerM 0.57 HEPCGN_15325 prlC oligopeptidase A low > 85
Escherichia coli ECRC62 0.45 BNILDI_12300 perM Putative permease PerM 0.57 BNILDI_03210 prlC oligopeptidase A — —
Escherichia coli ECRC102 0.45 NIAGMN_19610 perM Putative permease PerM 0.57 NIAGMN_14180 prlC oligopeptidase A — —
Escherichia coli BL21 0.45 ECD_02385 putative UPF0118 family inner membrane permease 0.57 ECD_03347 oligopeptidase A low > 60
Escherichia coli ECRC101 0.45 MCAODC_12370 perM Putative permease PerM 0.57 MCAODC_06930 prlC oligopeptidase A — —
Rahnella sp. WP5 0.45 EX31_RS22725 AI-2E family transporter 0.56 EX31_RS05165 oligopeptidase A low > 89
Alteromonas macleodii MIT1002 0.45 MIT1002_02210 pheromone autoinducer 2 transporter 0.58 MIT1002_03633 Oligopeptidase A low > 70
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF2176 Putative permease PerM (= YfgO) 0.57 GFF517 Oligopeptidase A (EC 3.4.24.70) low > 78
Serratia liquefaciens MT49 0.44 IAI46_18795 AI-2E family transporter 0.56 IAI46_24210 oligopeptidase A low > 86
Shewanella amazonensis SB2B 0.42 Sama_1911 hypothetical protein (RefSeq) 0.58 Sama_3546 oligopeptidase A (RefSeq) 0.30 4
Shewanella loihica PV-4 0.41 Shew_1843 hypothetical protein (RefSeq) 0.58 Shew_3657 oligopeptidase A (RefSeq) — —
Shewanella sp. ANA-3 0.40 Shewana3_1651 hypothetical protein (RefSeq) 0.59 Shewana3_4051 oligopeptidase A (RefSeq) low > 73
Shewanella oneidensis MR-1 0.39 SO2867 permease PerM, putative (NCBI ptt file) 0.59 SO4699 prlC oligopeptidase A (NCBI ptt file) low > 76

Not shown: 0 genomes with orthologs for PS417_07150 only; 52 genomes with orthologs for PS417_00245 only