Conservation of cofitness between PS417_24625 and PS417_24230 in Pseudomonas simiae WCS417

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_24625 (dimethylallyl)adenosine tRNA methylthiotransferase 1.0 PS417_24230 ATP-dependent protease 0.28 6
Pseudomonas fluorescens SBW25 0.99 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 1.00 PFLU_RS26150 ATP-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 1.00 PFLU_RS26150 ATP-binding protein 0.38 18
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_06375 (dimethylallyl)adenosine tRNA methylthiotransferase 0.94 AO353_14055 ATP-dependent protease low > 101
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_5018 tRNA-i(6)A37 methylthiotransferase 0.93 Pf6N2E2_5093 ATP-dependent protease La (EC 3.4.21.53) Type II low > 103
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_1380 tRNA-i(6)A37 methylthiotransferase 0.94 PfGW456L13_1459 ATP-dependent protease La (EC 3.4.21.53) Type II low > 87
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_2712 tRNA-i(6)A37 methylthiotransferase 0.76 Pf1N1B4_2787 ATP-dependent protease La (EC 3.4.21.53) Type II low > 87
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_15410 (dimethylallyl)adenosine tRNA methylthiotransferase 0.94 AO356_15765 ATP-dependent protease low > 104
Pseudomonas sp. RS175 0.97 PFR28_03848 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.93 PFR28_03779 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB 0.89 Psyr_4259 ATP-dependent protease, putative low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB 0.89 Psyr_4259 ATP-dependent protease, putative low > 86
Pseudomonas stutzeri RCH2 0.83 Psest_0532 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 0.84 Psest_3396 Predicted ATP-dependent protease low > 67
Pseudomonas sp. S08-1 0.83 OH686_09215 tRNA-i(6)A37 thiotransferase enzyme MiaB 0.79 OH686_16260 ATP-dependent protease La Type II low > 80
Marinobacter adhaerens HP15 0.73 HP15_2466 tRNA-i(6)A37 thiotransferase enzyme MiaB 0.35 HP15_1352 peptidase S16, lon domain protein low > 73
Shewanella sp. ANA-3 0.66 Shewana3_1008 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) 0.31 Shewana3_1160 ATP-dependent protease, putative (RefSeq) low > 73
Shewanella amazonensis SB2B 0.66 Sama_2575 tRNA-i(6)A37 modification enzyme MiaB (RefSeq) 0.30 Sama_2406 ATP-dependent protease, putative (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.66 MIT1002_01480 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB 0.49 MIT1002_01859 Lon protease low > 70
Shewanella oneidensis MR-1 0.66 SO1181 miaB tRNA-i(6)A37 modification enzyme MiaB (NCBI ptt file) 0.31 SO3391 ATP-dependent protease, putative (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.65 Shew_2923 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) 0.32 Shew_1976 putative ATP-dependent protease La-relatedprotein (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_04915 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.31 CSW01_18990 ATP-dependent protease low > 62
Dechlorosoma suillum PS 0.64 Dsui_1194 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 0.35 Dsui_2223 putative ATP-dependent protease low > 51
Acinetobacter radioresistens SK82 0.61 MPMX26_02667 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.31 MPMX26_01059 Lon protease low > 36
Acidovorax sp. GW101-3H11 0.60 Ac3H11_4008 tRNA-i(6)A37 methylthiotransferase 0.23 Ac3H11_106 ATP-dependent protease La (EC 3.4.21.53) Type II low > 79
Magnetospirillum magneticum AMB-1 0.46 AMB_RS22585 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.35 AMB_RS02920 ATP-dependent protease low > 64
Desulfovibrio vulgaris Hildenborough JW710 0.32 DVU0984 miaB tRNA-i(6)A37 modification enzyme MiaB (TIGR) 0.29 DVU1472 ATP-dependent protease, putative (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.31 DvMF_1330 RNA modification enzyme, MiaB family (RefSeq) 0.29 DvMF_0312 peptidase S16 lon domain protein (RefSeq) low > 51

Not shown: 76 genomes with orthologs for PS417_24625 only; 1 genomes with orthologs for PS417_24230 only