Conservation of cofitness between PS417_13140 and PS417_22945 in Pseudomonas simiae WCS417

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_13140 oxidoreductase 1.0 PS417_22945 phosphoribosylglycinamide formyltransferase 0.19 14
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS14200 PQQ-dependent sugar dehydrogenase 1.00 PFLU_RS24605 formate-dependent phosphoribosylglycinamide formyltransferase low > 109
Pseudomonas fluorescens SBW25 0.95 PFLU_RS14200 PQQ-dependent sugar dehydrogenase 1.00 PFLU_RS24605 formate-dependent phosphoribosylglycinamide formyltransferase low > 109
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_4753 Soluble aldose sugar dehydrogenase, PQQ-dependent (EC 1.1.5.-) 0.97 Pf1N1B4_879 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) low > 87
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_27715 oxidoreductase 0.95 AO356_17605 phosphoribosylglycinamide formyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_801 Soluble aldose sugar dehydrogenase, PQQ-dependent (EC 1.1.5.-) 0.96 Pf6N2E2_5444 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) low > 103
Pseudomonas sp. RS175 0.78 PFR28_01704 Aldose sugar dehydrogenase YliI 0.96 PFR28_03502 Formate-dependent phosphoribosylglycinamide formyltransferase low > 88
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_3029 Soluble aldose sugar dehydrogenase, PQQ-dependent (EC 1.1.5.-) 0.98 PfGW456L13_4820 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) low > 87
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_3771 conserved hypothetical protein 0.96 Psyr_1277 formate-dependent phosphoribosylglycinamide formyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_3771 conserved hypothetical protein 0.96 Psyr_1277 formate-dependent phosphoribosylglycinamide formyltransferase low > 86
Pseudomonas putida KT2440 0.68 PP_2198 aldose sugar dehydrogenase 0.93 PP_1457 Phosphoribosylglycinamide formyltransferase 2 low > 96
Pseudomonas stutzeri RCH2 0.67 Psest_2915 Glucose/sorbosone dehydrogenases 0.83 Psest_3137 phosphoribosylglycinamide formyltransferase 2 low > 67
Pseudomonas sp. S08-1 0.64 OH686_05395 Soluble aldose sugar dehydrogenase, PQQ-dependent 0.88 OH686_17700 phosphoribosylglycinamide formyltransferase 2 low > 80
Klebsiella michiganensis M5al 0.60 BWI76_RS09135 oxidoreductase 0.65 BWI76_RS18090 phosphoribosylglycinamide formyltransferase 2 low > 92
Pectobacterium carotovorum WPP14 0.60 HER17_RS12570 PQQ-dependent sugar dehydrogenase 0.62 HER17_RS11770 formate-dependent phosphoribosylglycinamide formyltransferase low > 75
Serratia liquefaciens MT49 0.60 IAI46_08255 PQQ-dependent sugar dehydrogenase 0.65 IAI46_14770 formate-dependent phosphoribosylglycinamide formyltransferase low > 86
Pantoea sp. MT58 0.57 IAI47_13100 PQQ-dependent sugar dehydrogenase 0.64 IAI47_08505 formate-dependent phosphoribosylglycinamide formyltransferase low > 76
Escherichia coli ECOR27 0.57 NOLOHH_22420 yliI aldose sugar dehydrogenase YliI 0.67 NOLOHH_16860 purT formate-dependent phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC62 0.57 BNILDI_20680 yliI aldose sugar dehydrogenase YliI 0.67 BNILDI_15655 purT formate-dependent phosphoribosylglycinamide formyltransferase — —
Escherichia coli BL21 0.57 ECD_00804 soluble aldose sugar dehydrogenase 0.67 ECD_01820 phosphoribosylglycinamide formyltransferase 2 low > 60
Escherichia coli BW25113 0.56 b0837 yliI predicted dehydrogenase (NCBI) 0.67 b1849 purT phosphoribosylglycinamide formyltransferase 2 (NCBI) low > 76
Escherichia coli ECRC102 0.56 NIAGMN_04095 yliI aldose sugar dehydrogenase YliI 0.66 NIAGMN_01710 purT formate-dependent phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC98 0.56 JDDGAC_09685 yliI aldose sugar dehydrogenase YliI 0.66 JDDGAC_00925 purT formate-dependent phosphoribosylglycinamide formyltransferase — —
Escherichia fergusonii Becca 0.56 EFB2_03269 Aldose sugar dehydrogenase YliI 0.67 EFB2_02094 Formate-dependent phosphoribosylglycinamide formyltransferase low > 86
Escherichia coli ECRC99 0.56 KEDOAH_21860 yliI aldose sugar dehydrogenase YliI 0.66 KEDOAH_01755 purT formate-dependent phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC101 0.56 MCAODC_25265 yliI aldose sugar dehydrogenase YliI 0.66 MCAODC_19055 purT formate-dependent phosphoribosylglycinamide formyltransferase — —
Enterobacter sp. TBS_079 0.56 MPMX20_01475 Aldose sugar dehydrogenase YliI 0.64 MPMX20_02754 Formate-dependent phosphoribosylglycinamide formyltransferase low > 85
Escherichia coli ECOR38 0.56 HEPCGN_01980 yliI aldose sugar dehydrogenase YliI 0.67 HEPCGN_04755 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.74 5
Dickeya dadantii 3937 0.56 DDA3937_RS09390 PQQ-dependent sugar dehydrogenase 0.63 DDA3937_RS10145 formate-dependent phosphoribosylglycinamide formyltransferase low > 74
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2129 Glucose/sorbosone dehydrogenases 0.62 EX28DRAFT_0707 formate-dependent phosphoribosylglycinamide formyltransferase (EC 6.3.4.-) low > 76
Escherichia coli ECRC101 0.56 OKFHMN_06050 yliI aldose sugar dehydrogenase YliI 0.66 OKFHMN_26350 purT formate-dependent phosphoribosylglycinamide formyltransferase — —
Dickeya dianthicola ME23 0.55 DZA65_RS09715 PQQ-dependent sugar dehydrogenase 0.64 DZA65_RS10590 formate-dependent phosphoribosylglycinamide formyltransferase low > 75
Dickeya dianthicola 67-19 0.55 HGI48_RS09405 PQQ-dependent sugar dehydrogenase 0.64 HGI48_RS10175 formate-dependent phosphoribosylglycinamide formyltransferase low > 71
Lysobacter sp. OAE881 0.55 ABIE51_RS09195 PQQ-dependent sugar dehydrogenase 0.69 ABIE51_RS14525 formate-dependent phosphoribosylglycinamide formyltransferase low > 62
Rahnella sp. WP5 0.54 EX31_RS09725 PQQ-dependent sugar dehydrogenase 0.63 EX31_RS24735 formate-dependent phosphoribosylglycinamide formyltransferase low > 89
Azospirillum brasilense Sp245 0.51 AZOBR_RS31355 putative glucose dehydrogenase precursor 0.51 AZOBR_RS29810 phosphoribosylglycinamide formyltransferase low > 97
Variovorax sp. SCN45 0.42 GFF973 PQQ-dependent oxidoreductase, gdhB family 0.58 GFF3604 Formate-dependent phosphoribosylglycinamide formyltransferase low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF803 PQQ-dependent oxidoreductase, gdhB family 0.61 GFF363 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) low > 90
Acidovorax sp. GW101-3H11 0.41 Ac3H11_2201 PQQ-dependent oxidoreductase, gdhB family 0.60 Ac3H11_4666 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) low > 79
Variovorax sp. OAS795 0.40 ABID97_RS14125 PQQ-dependent sugar dehydrogenase 0.56 ABID97_RS00805 formate-dependent phosphoribosylglycinamide formyltransferase low > 91
Azospirillum sp. SherDot2 0.40 MPMX19_04049 Aldose sugar dehydrogenase YliI 0.52 MPMX19_05086 Formate-dependent phosphoribosylglycinamide formyltransferase low > 112
Brevundimonas sp. GW460-12-10-14-LB2 0.39 A4249_RS12595 PQQ-dependent sugar dehydrogenase 0.61 A4249_RS00765 formate-dependent phosphoribosylglycinamide formyltransferase low > 48
Marinobacter adhaerens HP15 0.38 HP15_835 secreted protein containing glucose sorbosone dehydrogenase domain 0.74 HP15_1245 phosphoribosylglycinamide formyltransferase 2 low > 73
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.4823.1 PQQ-dependent oxidoreductase, gdhB family 0.70 Xcc-8004.3846.1 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) low > 74
Synechococcus elongatus PCC 7942 0.32 Synpcc7942_1791 hypothetical protein 0.54 Synpcc7942_0588 purT phosphoribosylglycinamide formyltransferase 2 low > 38
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_2152 Glucose/sorbosone dehydrogenases 0.53 Ga0059261_3309 formate-dependent phosphoribosylglycinamide formyltransferase (EC 6.3.4.-) low > 68
Acinetobacter radioresistens SK82 0.28 MPMX26_02988 Aldose sugar dehydrogenase YliI 0.59 MPMX26_01866 Formate-dependent phosphoribosylglycinamide formyltransferase low > 36

Not shown: 17 genomes with orthologs for PS417_13140 only; 31 genomes with orthologs for PS417_22945 only