Conservation of cofitness between PS417_20690 and PS417_21975 in Pseudomonas simiae WCS417

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_20690 chemotaxis protein 1.0 PS417_21975 glutamate-pyruvate aminotransferase 0.41 5
Pseudomonas fluorescens SBW25 0.99 PFLU_RS22310 methyl-accepting chemotaxis protein 0.98 PFLU_RS23580 alanine transaminase low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS22310 methyl-accepting chemotaxis protein 0.98 PFLU_RS23580 alanine transaminase low > 109
Pseudomonas lactucae CFBP13502 0.98 GEMAOFIL_04283 Aerotaxis receptor 0.99 GEMAOFIL_04533 Glutamate-pyruvate aminotransferase AlaC low > 93
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_00575 chemotaxis protein 0.97 AO353_03235 glutamate-pyruvate aminotransferase low > 101
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_3886 Aerotaxis receptor Aer 0.97 Pf1N1B4_555 Uncharacterized PLP-dependent aminotransferase YfdZ 0.30 21
Pseudomonas sp. DMC3 0.93 GFF732 Aerotaxis receptor 0.97 GFF5265 Glutamate-pyruvate aminotransferase AlaC low > 89
Pseudomonas sp. RS175 0.92 PFR28_01097 Aerotaxis receptor 0.97 PFR28_00596 Glutamate-pyruvate aminotransferase AlaC low > 88
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_02395 chemotaxis protein 0.97 AO356_05050 glutamate-pyruvate aminotransferase low > 104
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_4054 Aerotaxis receptor Aer 0.97 PfGW456L13_1928 Uncharacterized PLP-dependent aminotransferase YfdZ low > 87
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_2303 Aerotaxis receptor Aer 0.97 Pf6N2E2_2862 Uncharacterized PLP-dependent aminotransferase YfdZ low > 103
Pseudomonas sp. SVBP6 0.91 COO64_RS05215 PAS domain-containing methyl-accepting chemotaxis protein 0.95 COO64_RS03725 alaC alanine transaminase low > 93
Pseudomonas sp. BP01 0.87 JOY50_RS22020 PAS domain-containing methyl-accepting chemotaxis protein 0.96 JOY50_RS22975 alaC alanine transaminase low > 84
Pseudomonas putida KT2440 0.87 PP_2111 putative aerotaxis receptor 0.95 PP_0817 aminotransferase low > 96
Pseudomonas syringae pv. syringae B728a 0.86 Psyr_3406 PAS 0.95 Psyr_0468 Aminotransferase, class I and II low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.86 Psyr_3406 PAS 0.95 Psyr_0468 Aminotransferase, class I and II low > 86
Pseudomonas sp. S08-1 0.80 OH686_02165 Aerotaxis sensor receptor protein 0.93 OH686_04000 Glutamate-pyruvate aminotransferase AlaC low > 80
Pseudomonas aeruginosa PA14 0.79 IKLFDK_07465 Methyl-accepting chemotaxis protein Aer 0.91 IKLFDK_30040 alanine transaminase low > 100
Pseudomonas segetis P6 0.73 MPMX49_02321 Aerotaxis receptor 0.93 MPMX49_02604 Glutamate-pyruvate aminotransferase AlaC low > 75
Dechlorosoma suillum PS 0.30 Dsui_3238 PAS domain S-box 0.78 Dsui_2909 aspartate/tyrosine/aromatic aminotransferase low > 51
Pantoea sp. MT58 0.27 IAI47_17690 PAS domain-containing protein 0.91 IAI47_05575 alanine transaminase low > 76
Pantoea agglomerans CFBP13505 P0401 0.25 PagCFBP13505_RS21010 PAS domain-containing methyl-accepting chemotaxis protein 0.91 PagCFBP13505_RS20125 alanine transaminase low > 74
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS01615 aerotaxis receptor Aer 0.84 RR42_RS28540 glutamate--pyruvate aminotransferase low > 128
Rahnella sp. WP5 0.25 EX31_RS01840 PAS domain-containing protein 0.93 EX31_RS20015 alanine transaminase low > 89
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS02230 methyl-accepting chemotaxis protein 0.81 HSERO_RS12800 aspartate aminotransferase low > 78
Erwinia amylovora T8 0.24 OLJFJH_03325 Methyl-accepting chemotaxis protein (MCP) signalling domain-containing protein 0.90 OLJFJH_10980 alanine transaminase low > 58
Enterobacter asburiae PDN3 0.23 EX28DRAFT_1048 PAS domain S-box 0.89 EX28DRAFT_0240 Aspartate/tyrosine/aromatic aminotransferase low > 76
Dickeya dianthicola ME23 0.23 DZA65_RS12820 PAS domain-containing protein 0.92 DZA65_RS15705 alanine transaminase low > 75
Acidovorax sp. GW101-3H11 0.23 Ac3H11_2704 Aerotaxis sensor receptor protein 0.84 Ac3H11_3720 Uncharacterized PLP-dependent aminotransferase YfdZ low > 79
Dickeya dianthicola 67-19 0.23 HGI48_RS12260 PAS domain-containing protein 0.92 HGI48_RS14755 alanine transaminase low > 71
Escherichia coli ECRC98 0.22 JDDGAC_22265 aer aerotaxis sensor receptor Aer 0.89 JDDGAC_26335 alaC alanine transaminase low > 87
Escherichia coli ECRC62 0.22 BNILDI_01095 aer aerotaxis sensor receptor Aer 0.89 BNILDI_12910 alaC alanine transaminase low > 75
Escherichia coli ECRC100 0.22 OKFHMN_18630 aer aerotaxis sensor receptor Aer 0.89 OKFHMN_22370 alaC alanine transaminase low > 79
Escherichia coli ECRC99 0.22 KEDOAH_09515 aer aerotaxis sensor receptor Aer 0.89 KEDOAH_05850 alaC alanine transaminase — —
Escherichia coli ECRC101 0.22 MCAODC_09145 aer aerotaxis sensor receptor Aer 0.89 MCAODC_12900 alaC alanine transaminase low > 88
Escherichia coli ECRC102 0.22 NIAGMN_16395 aer aerotaxis sensor receptor Aer 0.89 NIAGMN_20145 alaC alanine transaminase low > 80
Escherichia coli ECOR27 0.22 NOLOHH_10420 aer aerotaxis sensor receptor Aer 0.89 NOLOHH_14055 alaC alanine transaminase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.22 OHPLBJKB_00630 Aerotaxis receptor 0.89 OHPLBJKB_01342 Glutamate-pyruvate aminotransferase AlaC low > 74
Enterobacter sp. TBS_079 0.22 MPMX20_03981 Aerotaxis receptor 0.89 MPMX20_03277 Glutamate-pyruvate aminotransferase AlaC low > 85
Dickeya dadantii 3937 0.22 DDA3937_RS17070 PAS domain-containing protein 0.91 DDA3937_RS14825 alanine transaminase low > 74
Escherichia fergusonii Becca 0.22 EFB2_00739 Aerotaxis receptor 0.89 EFB2_01495 Glutamate-pyruvate aminotransferase AlaC low > 86
Escherichia coli ECOR38 0.22 HEPCGN_17480 aer aerotaxis sensor receptor Aer 0.89 HEPCGN_21580 alaC alanine transaminase low > 88
Escherichia coli Nissle 1917 0.22 ECOLIN_RS17730 aerotaxis sensor receptor Aer 0.89 ECOLIN_RS13690 alanine transaminase low > 55
Escherichia coli BW25113 0.22 b3072 aer fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component (NCBI) 0.89 b2379 yfdZ hypothetical protein (NCBI) low > 76
Escherichia coli BL21 0.22 ECD_02941 fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component 0.89 ECD_02289 glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase low > 61
Pectobacterium carotovorum WPP14 0.22 HER17_RS09640 PAS domain-containing methyl-accepting chemotaxis protein 0.93 HER17_RS06655 alanine transaminase low > 75
Castellaniella sp019104865 MT123 0.22 ABCV34_RS09925 methyl-accepting chemotaxis protein 0.80 ABCV34_RS02290 alanine transaminase low > 48
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.20 GFF3182 Aerotaxis sensor receptor protein 0.89 GFF1970 Uncharacterized PLP-dependent aminotransferase YfdZ low > 78

Not shown: 18 genomes with orthologs for PS417_20690 only; 35 genomes with orthologs for PS417_21975 only