Conservation of cofitness between GFF4331 and GFF4115 in Sphingobium sp. HT1-2

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF4331 Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) 1.0 GFF4115 DNA-3-methyladenine glycosylase (EC 3.2.2.20) 0.72 2
Sinorhizobium meliloti 1021 0.44 SMa1209 FixI1 ATPase 0.52 SMc00923 DNA-3-methyladenine DNA glycosylase low > 103
Rhizobium sp. OAE497 0.43 ABIE40_RS26135 cation-translocating P-type ATPase 0.47 ABIE40_RS03590 DNA-3-methyladenine glycosylase I low > 107
Magnetospirillum magneticum AMB-1 0.42 AMB_RS22095 cadmium-translocating P-type ATPase 0.28 AMB_RS12955 DNA-3-methyladenine glycosylase I — —
Agrobacterium fabrum C58 0.42 Atu1528 nitrogen fixation protein FixI 0.45 Atu0670 3-methyladenine-DNA glycosylase low > 89
Bosea sp. OAE506 0.41 ABIE41_RS10535 heavy metal translocating P-type ATPase 0.58 ABIE41_RS09690 DNA-3-methyladenine glycosylase I low > 77
Xanthobacter sp. DMC5 0.40 GFF4628 Copper-exporting P-type ATPase 0.49 GFF3576 DNA-3-methyladenine glycosylase 1 — —
Dinoroseobacter shibae DFL-12 0.39 Dshi_0667 heavy metal translocating P-type ATPase (RefSeq) 0.59 Dshi_3064 DNA-3-methyladenine glycosylase I (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.39 PGA1_c30050 heavy metal translocating ATPase CcoI 0.47 PGA1_c22000 putative DNA-3-methyladenine glycosylase 1 low > 62
Rhodopseudomonas palustris CGA009 0.37 TX73_000070 cation-translocating P-type ATPase 0.54 TX73_005485 DNA-3-methyladenine glycosylase I low > 86
Rhodospirillum rubrum S1H 0.36 Rru_A3324 copper-translocating P-type ATPase (NCBI) 0.29 Rru_A1573 Methyladenine glycosylase (NCBI) — —
Caulobacter crescentus NA1000 0.34 CCNA_01473 E1-E2 cation pump ATPase fixI 0.58 CCNA_00386 DNA-3-methyladenine glycosylase low > 66
Caulobacter crescentus NA1000 Δfur 0.34 CCNA_01473 E1-E2 cation pump ATPase fixI 0.58 CCNA_00386 DNA-3-methyladenine glycosylase low > 67
Shewanella loihica PV-4 0.29 Shew_1990 heavy metal translocating P-type ATPase (RefSeq) 0.53 Shew_0011 DNA-3-methyladenine glycosylase I (RefSeq) low > 60
Shewanella amazonensis SB2B 0.29 Sama_1796 cation transporter E1-E2 family ATPase (RefSeq) 0.51 Sama_0027 DNA-3-methyladenine glycosylase I (RefSeq) low > 62
Shewanella sp. ANA-3 0.27 Shewana3_2112 heavy metal translocating P-type ATPase (RefSeq) 0.53 Shewana3_0018 DNA-3-methyladenine glycosylase I (RefSeq) low > 73
Shewanella oneidensis MR-1 0.27 SO2359 cation transport ATPase, E1-E2 family (NCBI ptt file) 0.52 SO0016 tag DNA-3-methyladenine glycosidase I (NCBI ptt file) low > 76
Variovorax sp. OAS795 0.26 ABID97_RS16235 cation-translocating P-type ATPase 0.48 ABID97_RS16390 DNA-3-methyladenine glycosylase I — —
Dechlorosoma suillum PS 0.26 Dsui_1625 copper/silver-translocating P-type ATPase 0.49 Dsui_2185 DNA-3-methyladenine glycosylase I — —
Acidovorax sp. GW101-3H11 0.25 Ac3H11_966 Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) 0.51 Ac3H11_4535 DNA-3-methyladenine glycosylase (EC 3.2.2.20) low > 79
Variovorax sp. SCN45 0.25 GFF6966 Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) 0.62 GFF6835 DNA-3-methyladenine glycosylase (EC 3.2.2.20) low > 127
Pseudomonas stutzeri RCH2 0.25 Psest_2533 copper-(or silver)-translocating P-type ATPase/heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase 0.48 Psest_0012 DNA-3-methyladenine glycosylase I — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.25 GFF4133 Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) 0.49 GFF170 DNA-3-methyladenine glycosylase (EC 3.2.2.20) — —
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS11135 heavy metal translocating P-type ATPase 0.51 ABZR87_RS20945 DNA-3-methyladenine glycosylase I low > 80
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS16065 cation transporter 0.49 HSERO_RS07225 DNA-3-methyladenine glycosylase low > 78
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS04425 heavy metal translocating P-type ATPase 0.48 ABZR86_RS15805 DNA-3-methyladenine glycosylase I low > 74
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_1972 copper-(or silver)-translocating P-type ATPase/heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase 0.52 B158DRAFT_0470 DNA-3-methyladenine glycosylase I (EC 3.2.2.20) low > 40
Pedobacter sp. GW460-11-11-14-LB5 0.20 CA265_RS01365 heavy metal translocating P-type ATPase 0.54 CA265_RS19650 DNA-3-methyladenine glycosylase low > 88
Cellulophaga baltica 18 0.19 M666_RS07165 heavy metal translocating P-type ATPase metal-binding domain-containing protein 0.54 M666_RS03105 DNA-3-methyladenine glycosylase I low > 67

Not shown: 3 genomes with orthologs for GFF4331 only; 83 genomes with orthologs for GFF4115 only