Conservation of cofitness between GFF1279 and GFF4079 in Sphingobium sp. HT1-2

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF1279 Uncharacterized protein YhiN 1.0 GFF4079 Protein of unknown function DUF541 0.75 8
Sphingomonas koreensis DSMZ 15582 0.71 Ga0059261_3388 flavoprotein, HI0933 family 0.31 Ga0059261_1880 Uncharacterized conserved protein low > 68
Phaeobacter inhibens DSM 17395 0.53 PGA1_c09590 uncharacterized protein YhiN 0.24 PGA1_c07630 Uncharacterized conserved protein low > 62
Rhizobium sp. OAE497 0.52 ABIE40_RS03215 NAD(P)/FAD-dependent oxidoreductase 0.26 ABIE40_RS12160 SIMPL domain-containing protein low > 107
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_01545 NAD(FAD)-utilizing dehydrogenase 0.34 CCNA_02378 SIMPL family protein low > 67
Caulobacter crescentus NA1000 0.52 CCNA_01545 NAD(FAD)-utilizing dehydrogenase 0.34 CCNA_02378 SIMPL family protein low > 66
Rahnella sp. WP5 0.52 EX31_RS05140 NAD(P)/FAD-dependent oxidoreductase 0.15 EX31_RS21445 oxidative stress defense protein low > 89
Agrobacterium fabrum C58 0.51 Atu0603 hypothetical protein 0.20 Atu2162 periplasmic immunogenic protein low > 89
Pantoea agglomerans CFBP13505 P0401 0.50 PagCFBP13505_RS17875 NAD(P)/FAD-dependent oxidoreductase 0.14 PagCFBP13505_RS15990 oxidative stress defense protein low > 74
Erwinia amylovora T8 0.50 OLJFJH_04505 aminoacetone oxidase family FAD-binding enzyme 0.19 OLJFJH_08710 oxidative stress defense protein low > 58
Pantoea sp. MT58 0.50 IAI47_01370 NAD(P)/FAD-dependent oxidoreductase 0.15 IAI47_03710 oxidative stress defense protein low > 76
Alteromonas macleodii MIT1002 0.49 MIT1002_00118 N-methyltryptophan oxidase 0.11 MIT1002_02021 26 kDa periplasmic immunogenic protein precursor low > 70
Erwinia tracheiphila SCR3 0.49 LU632_RS19445 NAD(P)/FAD-dependent oxidoreductase 0.16 LU632_RS05840 oxidative stress defense protein 0.40 46
Lysobacter sp. OAE881 0.49 ABIE51_RS09810 NAD(P)/FAD-dependent oxidoreductase 0.28 ABIE51_RS06775 SIMPL domain-containing protein low > 62
Klebsiella michiganensis M5al 0.49 BWI76_RS26565 membrane protein 0.17 BWI76_RS23960 oxidative stress defense protein 0.27 5
Erwinia tracheiphila HP pepo 2.2 0.49 IJEDHG_12610 aminoacetone oxidase family FAD-binding enzyme 0.17 IJEDHG_03335 oxidative stress defense protein 0.72 3
Escherichia coli ECRC102 0.49 NIAGMN_14210 yhiN Uncharacterized protein YhiN 0.14 NIAGMN_17180 yggE oxidative stress defense protein low > 80
Escherichia coli ECRC98 0.49 JDDGAC_20075 yhiN Uncharacterized protein YhiN 0.14 JDDGAC_23045 yggE oxidative stress defense protein low > 87
Escherichia coli ECRC99 0.49 KEDOAH_11700 yhiN Uncharacterized protein YhiN 0.14 KEDOAH_08725 yggE oxidative stress defense protein — —
Escherichia coli ECRC100 0.49 OKFHMN_16445 yhiN Uncharacterized protein YhiN 0.14 OKFHMN_19415 yggE oxidative stress defense protein low > 79
Escherichia coli ECRC101 0.49 MCAODC_06960 yhiN Uncharacterized protein YhiN 0.14 MCAODC_09935 yggE oxidative stress defense protein low > 87
Escherichia coli BL21 0.49 ECD_03341 putative oxidoreductase 0.14 ECD_02753 oxidative stress defense protein low > 61
Enterobacter sp. TBS_079 0.49 MPMX20_04392 hypothetical protein 0.15 MPMX20_03774 26 kDa periplasmic immunogenic protein low > 85
Escherichia coli Nissle 1917 0.49 ECOLIN_RS19955 NAD(P)/FAD-dependent oxidoreductase 0.14 ECOLIN_RS16240 oxidative stress defense protein low > 55
Escherichia fergusonii Becca 0.49 EFB2_00323 hypothetical protein 0.14 EFB2_00984 26 kDa periplasmic immunogenic protein low > 86
Escherichia coli BW25113 0.49 b3492 yhiN predicted oxidoreductase with FAD/NAD(P)-binding domain (NCBI) 0.14 b2922 yggE hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_00211 hypothetical protein 0.14 OHPLBJKB_00794 26 kDa periplasmic immunogenic protein low > 74
Escherichia coli ECRC62 0.49 BNILDI_03180 yhiN Uncharacterized protein YhiN 0.14 BNILDI_09860 yggE oxidative stress defense protein low > 75
Escherichia coli ECOR38 0.49 HEPCGN_15360 yhiN Uncharacterized protein YhiN 0.14 HEPCGN_18720 yggE oxidative stress defense protein low > 88
Escherichia coli ECOR27 0.49 NOLOHH_08380 yhiN Uncharacterized protein YhiN 0.14 NOLOHH_11325 yggE oxidative stress defense protein low > 76
Shewanella loihica PV-4 0.47 Shew_3802 hypothetical protein (RefSeq) 0.17 Shew_3168 hypothetical protein (RefSeq) low > 60
Brevundimonas sp. GW460-12-10-14-LB2 0.47 A4249_RS12180 NAD(P)/FAD-dependent oxidoreductase 0.34 A4249_RS01450 SIMPL domain-containing protein low > 48
Shewanella sp. ANA-3 0.47 Shewana3_0055 hypothetical protein (RefSeq) 0.16 Shewana3_3626 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.46 SO0054 conserved hypothetical protein TIGR00275 (NCBI ptt file) 0.15 SO4070 conserved hypothetical protein (NCBI ptt file) low > 76
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.2264.1 FIG01211838: hypothetical protein 0.34 Xcc-8004.1878.1 Protein of unknown function DUF541 low > 74
Dinoroseobacter shibae DFL-12 0.45 Dshi_2710 HI0933 family protein (RefSeq) 0.24 Dshi_0791 protein of unknown function DUF541 (RefSeq) low > 64
Synechococcus elongatus PCC 7942 0.20 Synpcc7942_2067 hypothetical protein 0.11 Synpcc7942_0620 hypothetical protein 0.51 5
Pontibacter actiniarum KMM 6156, DSM 19842 0.15 CA264_05900 aminoacetone oxidase family FAD-binding enzyme 0.17 CA264_08325 SIMPL domain-containing protein low > 74
Rhodopseudomonas palustris CGA009 0.09 TX73_011285 NAD(P)/FAD-dependent oxidoreductase 0.22 TX73_001290 SIMPL domain-containing protein low > 86

Not shown: 68 genomes with orthologs for GFF1279 only; 1 genomes with orthologs for GFF4079 only