Conservation of cofitness between Psest_0498 and Psest_3927 in Pseudomonas stutzeri RCH2

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0498 ribosome small subunit-dependent GTPase A 1.0 Psest_3927 thiazole biosynthesis/tRNA modification protein ThiI 0.34 4
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_1421 Ribosome small subunit-stimulated GTPase EngC 0.83 Pf1N1B4_1604 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis — —
Pseudomonas sp. RS175 0.86 PFR28_05112 Small ribosomal subunit biogenesis GTPase RsgA 0.83 PFR28_04950 tRNA sulfurtransferase — —
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_13100 GTPase RsgA 0.83 AO353_12175 tRNA s(4)U8 sulfurtransferase — —
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_3623 Ribosome small subunit-stimulated GTPase EngC 0.83 Pf6N2E2_3819 Thiamine biosynthesis protein thiI — —
Pseudomonas simiae WCS417 0.85 PS417_02445 GTPase RsgA 0.82 PS417_01660 tRNA s(4)U8 sulfurtransferase — —
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_163 Ribosome small subunit-stimulated GTPase EngC 0.83 PfGW456L13_341 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis — —
Pseudomonas fluorescens SBW25 0.85 PFLU_RS02525 small ribosomal subunit biogenesis GTPase RsgA 0.82 PFLU_RS01715 tRNA 4-thiouridine(8) synthase ThiI — —
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_08700 GTPase RsgA 0.82 AO356_09700 tRNA s(4)U8 sulfurtransferase — —
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS02525 small ribosomal subunit biogenesis GTPase RsgA 0.82 PFLU_RS01715 tRNA 4-thiouridine(8) synthase ThiI — —
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_0563 Protein of unknown function DUF258 0.81 Psyr_4816 [ThiS-adenylate] sulfurtransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_0563 Protein of unknown function DUF258 0.81 Psyr_4816 [ThiS-adenylate] sulfurtransferase — —
Pseudomonas sp. S08-1 0.84 OH686_09515 ribosome small subunit-dependent GTPase A 0.79 OH686_10615 tRNA 4-thiouridine synthase / Rhodanese-like domain required for thiamine synthesis — —
Pseudomonas putida KT2440 0.82 PP_4903 Putative ribosome biogenesis GTPase RsgA 0.81 PP_5045 tRNA sulfurtransferase — —
Marinobacter adhaerens HP15 0.56 HP15_2507 ribosome-associated GTPase 0.49 HP15_3407 thiamine biosynthesis protein — —
Dickeya dadantii 3937 0.45 DDA3937_RS18945 small ribosomal subunit biogenesis GTPase RsgA 0.51 DDA3937_RS05545 tRNA 4-thiouridine(8) synthase ThiI — —
Dickeya dianthicola 67-19 0.45 HGI48_RS19040 small ribosomal subunit biogenesis GTPase RsgA 0.51 HGI48_RS05605 tRNA 4-thiouridine(8) synthase ThiI — —
Dickeya dianthicola ME23 0.45 DZA65_RS20155 small ribosomal subunit biogenesis GTPase RsgA 0.51 DZA65_RS05930 tRNA 4-thiouridine(8) synthase ThiI — —
Shewanella loihica PV-4 0.44 Shew_0558 ribosome-associated GTPase (RefSeq) 0.52 Shew_2766 thiamine biosynthesis protein ThiI (RefSeq) — —
Serratia liquefaciens MT49 0.44 IAI46_01570 small ribosomal subunit biogenesis GTPase RsgA 0.51 IAI46_04940 tRNA 4-thiouridine(8) synthase ThiI — —
Rahnella sp. WP5 0.44 EX31_RS08870 small ribosomal subunit biogenesis GTPase RsgA 0.50 EX31_RS22170 tRNA 4-thiouridine(8) synthase ThiI — —
Escherichia coli BW25113 0.43 b4161 yjeQ orf, hypothetical protein (VIMSS) 0.50 b0423 thiI thiamine biosynthesis protein ThiI (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03881 Small ribosomal subunit biogenesis GTPase RsgA 0.50 OHPLBJKB_03253 tRNA sulfurtransferase — —
Escherichia coli BL21 0.43 ECD_04031 ribosome small subunit-dependent GTPase A 0.50 ECD_00371 tRNA s(4)U8 sulfurtransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF1990 Ribosome small subunit-stimulated GTPase EngC 0.51 GFF4327 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis — —
Escherichia coli Nissle 1917 0.43 ECOLIN_RS24175 small ribosomal subunit biogenesis GTPase RsgA 0.50 ECOLIN_RS02550 tRNA uracil 4-sulfurtransferase ThiI — —
Escherichia coli ECRC99 0.43 KEDOAH_15845 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.52 KEDOAH_19560 thiI tRNA sulfurtransferase — —
Escherichia coli ECRC102 0.43 NIAGMN_10165 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.52 NIAGMN_06460 thiI tRNA sulfurtransferase — —
Escherichia coli ECRC62 0.43 BNILDI_06910 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.51 BNILDI_22770 thiI tRNA sulfurtransferase — —
Escherichia coli ECOR27 0.43 NOLOHH_04580 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.50 NOLOHH_01355 thiI tRNA sulfurtransferase — —
Escherichia coli ECRC98 0.43 JDDGAC_15955 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.52 JDDGAC_12060 thiI tRNA sulfurtransferase — —
Escherichia fergusonii Becca 0.43 EFB2_04374 Small ribosomal subunit biogenesis GTPase RsgA 0.51 EFB2_03634 tRNA sulfurtransferase — —
Escherichia coli ECRC101 0.43 MCAODC_02830 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.52 MCAODC_27630 thiI tRNA sulfurtransferase — —
Escherichia coli ECRC101 0.43 OKFHMN_12320 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.52 OKFHMN_08405 thiI tRNA sulfurtransferase — —
Escherichia coli ECOR38 0.43 HEPCGN_10545 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.50 HEPCGN_07035 thiI tRNA sulfurtransferase — —
Pectobacterium carotovorum WPP14 0.43 HER17_RS02410 small ribosomal subunit biogenesis GTPase RsgA 0.52 HER17_RS15920 tRNA 4-thiouridine(8) synthase ThiI — —
Klebsiella michiganensis M5al 0.42 BWI76_RS02475 ribosome small subunit-dependent GTPase 0.50 BWI76_RS06395 tRNA 4-thiouridine(8) synthase ThiI — —
Pantoea sp. MT58 0.42 IAI47_02535 small ribosomal subunit biogenesis GTPase RsgA 0.50 IAI47_14725 tRNA 4-thiouridine(8) synthase ThiI — —
Shewanella amazonensis SB2B 0.42 Sama_3033 ribosome-associated GTPase (RefSeq) 0.51 Sama_2431 thiamine biosynthesis protein ThiI (RefSeq) — —
Shewanella oneidensis MR-1 0.42 SO0591 conserved hypothetical protein TIGR00157 (NCBI ptt file) 0.51 SO1531 thiI thiamine biosynthesis protein ThiI (NCBI ptt file) — —
Shewanella sp. ANA-3 0.42 Shewana3_0589 ribosome-associated GTPase (RefSeq) 0.52 Shewana3_2896 thiamine biosynthesis protein ThiI (RefSeq) — —
Erwinia tracheiphila SCR3 0.40 LU632_RS01945 rsgA small ribosomal subunit biogenesis GTPase RsgA 0.51 LU632_RS18845 thiI tRNA 4-thiouridine(8) synthase ThiI — —
Enterobacter asburiae PDN3 0.40 EX28DRAFT_3359 ribosome small subunit-dependent GTPase A 0.50 EX28DRAFT_2548 tRNA sulfurtransferase ThiI/thiazole biosynthesis domain — —
Enterobacter sp. TBS_079 0.40 MPMX20_00442 Small ribosomal subunit biogenesis GTPase RsgA 0.49 MPMX20_01014 tRNA sulfurtransferase — —

Not shown: 30 genomes with orthologs for Psest_0498 only; 1 genomes with orthologs for Psest_3927 only