| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_05585 | | hypothetical protein | 1.0 | PS417_19630 | | LuxR family transcriptional regulator | 0.20 | 15 |
| Pseudomonas fluorescens SBW25 | 0.99 | PFLU_RS05670 | | Cys-tRNA(Pro) deacylase | 0.97 | PFLU_RS21600 | | response regulator transcription factor | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.99 | PFLU_RS05670 | | Cys-tRNA(Pro) deacylase | 0.97 | PFLU_RS21600 | | response regulator transcription factor | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.94 | AO353_04170 | | hypothetical protein | 0.82 | AO353_19270 | | LuxR family transcriptional regulator | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.94 | PfGW456L13_1736 | | Cys-tRNA(Pro) deacylase YbaK | 0.79 | PfGW456L13_2277 | | DNA-binding response regulator, LuxR family | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.93 | Pf1N1B4_765 | | Cys-tRNA(Pro) deacylase YbaK | 0.73 | Pf1N1B4_232 | | DNA-binding response regulator, LuxR family | low | > 87 |
| Pseudomonas sp. RS175 | 0.92 | PFR28_03366 | | Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK | 0.80 | PFR28_01009 | | Transcriptional regulatory protein DegU | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.90 | Psyr_3903 | | Conserved hypothetical protein 11 | 0.67 | Psyr_3299 | | two component transcriptional regulator, LuxR family | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.90 | AO356_18260 | | hypothetical protein | 0.78 | AO356_02965 | | LuxR family transcriptional regulator | low | > 104 |
| Pseudomonas syringae pv. syringae B728a | 0.90 | Psyr_3903 | | Conserved hypothetical protein 11 | 0.67 | Psyr_3299 | | two component transcriptional regulator, LuxR family | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.90 | Pf6N2E2_5576 | | Cys-tRNA(Pro) deacylase YbaK | 0.79 | Pf6N2E2_2418 | | DNA-binding response regulator, LuxR family | low | > 103 |
| Pseudomonas putida KT2440 | 0.89 | PP_1077 | | Cys-tRNAPro deacylase | 0.75 | PP_2126 | | DNA-binding response regulator, LuxR family | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.84 | Psest_1454 | | ybaK/ebsC protein | 0.53 | Psest_0662 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | low | > 67 |
| Pseudomonas sp. S08-1 | 0.80 | OH686_20370 | | Cys-tRNA(Pro) deacylase YbaK | 0.55 | OH686_21830 | | Two-component transcriptional response regulator, NarL/FixJ family | low | > 80 |
| Shewanella amazonensis SB2B | 0.47 | Sama_0531 | | YbaK/EbsC protein (RefSeq) | 0.37 | Sama_1873 | | response regulator receiver protein (RefSeq) | low | > 62 |
| Agrobacterium fabrum C58 | 0.31 | Atu0275 | | hypothetical protein | 0.26 | Atu5267 | | two component response regulator | — | — |
| Parabacteroides merdae CL09T00C40 | 0.30 | HMPREF1078_RS02420 | | Cys-tRNA(Pro) deacylase | 0.14 | HMPREF1078_RS04275 | | response regulator transcription factor | low | > 61 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.29 | Xcc-8004.4192.1 | | Cys-tRNA(Pro) deacylase YbaK | 0.33 | Xcc-8004.2797.1 | | DNA-binding response regulator, LuxR family | — | — |
| Bacteroides ovatus ATCC 8483 | 0.28 | BACOVA_03702 | | YbaK/EbsC protein | 0.17 | BACOVA_05544 | | transcriptional regulator, LuxR family | low | > 94 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.28 | BT0579 | | putative transcription regulator (NCBI ptt file) | 0.18 | BT0156 | | transcriptional regulator (NCBI ptt file) | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.28 | HMPREF1058_RS01730 | | Cys-tRNA(Pro) deacylase | 0.15 | HMPREF1058_RS02885 | | response regulator transcription factor | low | > 67 |
| Magnetospirillum magneticum AMB-1 | 0.27 | AMB_RS00065 | | Cys-tRNA(Pro) deacylase | 0.32 | AMB_RS06830 | | DNA-binding response regulator | low | > 64 |
| Ralstonia solanacearum PSI07 | 0.27 | RPSI07_RS12155 | | Cys-tRNA(Pro) deacylase | 0.31 | RPSI07_RS23850 | | DNA-binding response regulator | low | > 81 |
| Cupriavidus basilensis FW507-4G11 | 0.27 | RR42_RS03340 | | membrane protein | 0.32 | RR42_RS10190 | | LuxR family transcriptional regulator | low | > 128 |
| Phocaeicola dorei CL03T12C01 | 0.27 | ABI39_RS15335 | | Cys-tRNA(Pro) deacylase | 0.17 | ABI39_RS02195 | | response regulator transcription factor | low | > 72 |
| Ralstonia solanacearum GMI1000 | 0.27 | RS_RS12760 | | Cys-tRNA(Pro) deacylase | 0.32 | RS_RS11600 | | DNA-binding response regulator | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.27 | ABZR87_RS00800 | | Cys-tRNA(Pro) deacylase | 0.31 | ABZR87_RS05230 | | response regulator transcription factor | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.27 | RALBFv3_RS05145 | | Cys-tRNA(Pro) deacylase | 0.31 | RALBFv3_RS09500 | | DNA-binding response regulator | low | > 76 |
| Ralstonia solanacearum UW163 | 0.27 | UW163_RS08480 | | Cys-tRNA(Pro) deacylase | 0.31 | UW163_RS04080 | | DNA-binding response regulator | — | — |
| Variovorax sp. OAS795 | 0.26 | ABID97_RS21705 | | aminoacyl-tRNA deacylase | 0.32 | ABID97_RS22515 | | response regulator transcription factor | low | > 91 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.25 | GFF288 | | Transcriptional regulator | 0.28 | GFF4970 | | DNA-binding response regulator, LuxR family | — | — |
| Variovorax sp. SCN45 | 0.25 | GFF3103 | | Cys-tRNA(Pro) deacylase YbaK | 0.31 | GFF5818 | | Two-component transcriptional response regulator, NarL/FixJ family | low | > 127 |
| Herbaspirillum seropedicae SmR1 | 0.24 | HSERO_RS04270 | | membrane protein | 0.45 | HSERO_RS12850 | | LuxR family transcriptional regulator | low | > 78 |
Not shown: 50 genomes with orthologs for PS417_05585 only; 6 genomes with orthologs for PS417_19630 only