Conservation of cofitness between GFF1749 and GFF3546 in Variovorax sp. SCN45

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF1749 Cystathionine beta-lyase (EC 4.4.1.8) 1.0 GFF3546 Chaperone protein HtpG 0.59 10
Variovorax sp. OAS795 0.84 ABID97_RS22430 cystathionine beta-lyase 0.92 ABID97_RS00945 molecular chaperone HtpG low > 91
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS11250 cystathionine beta-lyase 0.59 ABZR87_RS09840 molecular chaperone HtpG low > 80
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS30610 cystathionine beta-lyase 0.57 RR42_RS14555 heat-shock protein Hsp90 low > 128
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_0607 cystathionine beta-lyase 0.52 Psyr_2017 Heat shock protein Hsp90:ATP-binding region, ATPase-like protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_0607 cystathionine beta-lyase 0.52 Psyr_2017 Heat shock protein Hsp90:ATP-binding region, ATPase-like protein low > 86
Rhizobium sp. OAE497 0.42 ABIE40_RS08820 cystathionine beta-lyase 0.34 ABIE40_RS29015 molecular chaperone HtpG low > 107
Sinorhizobium meliloti 1021 0.42 SMc02117 cystathionine beta-lyase 0.34 SM_b21183 molecular chaperone HtpG low > 103
Shewanella amazonensis SB2B 0.41 Sama_2008 cystathionine beta-lyase (RefSeq) 0.52 Sama_1313 heat shock protein 90 (RefSeq) low > 62
Shewanella sp. ANA-3 0.40 Shewana3_2414 cystathionine beta-lyase (RefSeq) 0.52 Shewana3_2443 heat shock protein 90 (RefSeq) low > 73
Shewanella loihica PV-4 0.40 Shew_1789 cystathionine beta-lyase (RefSeq) 0.51 Shew_2232 heat shock protein 90 (RefSeq) low > 60
Shewanella oneidensis MR-1 0.40 SO2191 metC cystathionine beta-lyase (NCBI ptt file) 0.52 SO2016 htpG heat shock protein HtpG (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_24330 cystathionine beta-lyase 0.51 AO353_01780 heat-shock protein Hsp90 low > 101
Rhodopseudomonas palustris CGA009 0.39 TX73_013235 cystathionine beta-lyase 0.36 TX73_025025 molecular chaperone HtpG low > 86
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_08400 cystathionine beta-lyase 0.50 CSW01_05030 molecular chaperone HtpG low > 62
Rhodospirillum rubrum S1H 0.37 Rru_A1613 Cystathionine beta-lyase (NCBI) 0.40 Rru_A0072 chaperone protein Hsp90 (NCBI) — —
Magnetospirillum magneticum AMB-1 0.37 AMB_RS06585 cystathionine beta-lyase 0.40 AMB_RS21970 molecular chaperone HtpG low > 64
Escherichia coli BW25113 0.36 b3008 metC cystathionine beta-lyase (NCBI) 0.53 b0473 htpG heat shock protein 90 (NCBI) low > 76
Escherichia coli ECOR27 0.36 NOLOHH_10735 metC cystathionine beta-lyase 0.53 NOLOHH_01080 htpG molecular chaperone HtpG low > 75
Escherichia coli ECRC62 0.36 BNILDI_00780 metC cystathionine beta-lyase 0.53 BNILDI_22500 htpG molecular chaperone HtpG low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_00693 Cystathionine beta-lyase MetC 0.53 OHPLBJKB_03201 Chaperone protein HtpG low > 73
Serratia liquefaciens MT49 0.36 IAI46_21725 cystathionine beta-lyase 0.52 IAI46_05245 molecular chaperone HtpG low > 86
Escherichia coli Nissle 1917 0.36 ECOLIN_RS17315 cystathionine beta-lyase 0.53 ECOLIN_RS02810 molecular chaperone HtpG low > 55
Escherichia fergusonii Becca 0.36 EFB2_00802 Cystathionine beta-lyase MetC 0.53 EFB2_03585 Chaperone protein HtpG low > 86
Escherichia coli ECOR38 0.36 HEPCGN_17825 metC cystathionine beta-lyase 0.52 HEPCGN_06765 htpG molecular chaperone HtpG low > 87
Escherichia coli BL21 0.36 ECD_02881 cystathionine beta-lyase, PLP-dependent 0.53 ECD_00424 protein refolding molecular co-chaperone Hsp90, Hsp70-dependent; heat-shock protein; ATPase low > 61
Escherichia coli ECRC102 0.36 NIAGMN_16725 metC cystathionine beta-lyase 0.53 NIAGMN_06205 htpG molecular chaperone HtpG — —
Escherichia coli ECRC100 0.36 OKFHMN_18960 metC cystathionine beta-lyase 0.53 OKFHMN_08150 htpG molecular chaperone HtpG low > 80
Escherichia coli ECRC101 0.36 MCAODC_09475 metC cystathionine beta-lyase 0.53 MCAODC_27375 htpG molecular chaperone HtpG low > 87
Escherichia coli ECRC99 0.36 KEDOAH_09185 metC cystathionine beta-lyase 0.53 KEDOAH_19815 htpG molecular chaperone HtpG — —
Klebsiella michiganensis M5al 0.36 BWI76_RS24285 cystathionine beta-lyase 0.52 BWI76_RS06835 molecular chaperone HtpG low > 92
Escherichia coli ECRC98 0.36 JDDGAC_22595 metC cystathionine beta-lyase 0.53 JDDGAC_11800 htpG molecular chaperone HtpG low > 86
Enterobacter asburiae PDN3 0.35 EX28DRAFT_3046 cystathionine beta-lyase, bacterial 0.52 EX28DRAFT_2484 Molecular chaperone, HSP90 family low > 76
Enterobacter sp. TBS_079 0.35 MPMX20_03852 Cystathionine beta-lyase MetC 0.52 MPMX20_01075 Chaperone protein HtpG low > 85
Pantoea sp. MT58 0.35 IAI47_03215 cystathionine beta-lyase 0.51 IAI47_14460 molecular chaperone HtpG low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF3120 Cystathionine beta-lyase (EC 4.4.1.8) 0.52 GFF4391 Chaperone protein HtpG low > 78
Rahnella sp. WP5 0.34 EX31_RS08025 cystathionine beta-lyase 0.52 EX31_RS22530 molecular chaperone HtpG low > 89
Erwinia tracheiphila SCR3 0.34 LU632_RS20545 metC cystathionine beta-lyase 0.51 LU632_RS18100 htpG molecular chaperone HtpG low > 74
Pectobacterium carotovorum WPP14 0.34 HER17_RS19690 cystathionine beta-lyase 0.52 HER17_RS15690 molecular chaperone HtpG low > 75
Dickeya dadantii 3937 0.34 DDA3937_RS01815 cystathionine beta-lyase 0.52 DDA3937_RS05795 molecular chaperone HtpG low > 74
Dickeya dianthicola ME23 0.33 DZA65_RS01785 cystathionine beta-lyase 0.52 DZA65_RS06170 molecular chaperone HtpG low > 75
Azospirillum sp. SherDot2 0.33 MPMX19_01339 Cystathionine beta-lyase MetC 0.39 MPMX19_00249 Chaperone protein HtpG low > 112
Dickeya dianthicola 67-19 0.33 HGI48_RS01710 cystathionine beta-lyase 0.52 HGI48_RS05845 molecular chaperone HtpG low > 71

Not shown: 3 genomes with orthologs for GFF1749 only; 41 genomes with orthologs for GFF3546 only