Conservation of cofitness between GFF2192 and GFF3490 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2192 GDP-mannose pyrophosphatase YffH 1.0 GFF3490 Exodeoxyribonuclease III (EC 3.1.11.2) 0.38 7
Escherichia coli ECOR38 0.92 HEPCGN_21155 nudK GDP-mannose pyrophosphatase NudK 0.93 HEPCGN_05265 xthA exodeoxyribonuclease III low > 87
Escherichia coli ECRC62 0.91 BNILDI_12475 nudK GDP-mannose pyrophosphatase NudK 0.92 BNILDI_16200 xthA exodeoxyribonuclease III low > 75
Escherichia coli ECOR27 0.91 NOLOHH_13665 nudK GDP-mannose pyrophosphatase NudK 0.92 NOLOHH_17415 xthA exodeoxyribonuclease III low > 75
Escherichia fergusonii Becca 0.91 EFB2_01421 GDP-mannose pyrophosphatase NudK 0.92 EFB2_02244 Exodeoxyribonuclease III low > 86
Escherichia coli Nissle 1917 0.91 ECOLIN_RS14075 GDP-mannose pyrophosphatase NudK 0.92 ECOLIN_RS09750 exodeoxyribonuclease III low > 55
Escherichia coli BL21 0.91 ECD_02358 GDP-mannose pyrophosphatase 0.92 ECD_01718 exonuclease III
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_01264 GDP-mannose pyrophosphatase NudK 0.92 OHPLBJKB_01983 Exodeoxyribonuclease III low > 73
Escherichia coli BW25113 0.91 b2467 yffH predicted NUDIX hydrolase (NCBI) 0.92 b1749 xthA exonuclease III (NCBI) low > 76
Escherichia coli ECRC100 0.90 OKFHMN_21985 nudK GDP-mannose pyrophosphatase NudK 0.92 OKFHMN_26900 xthA exodeoxyribonuclease III low > 80
Escherichia coli ECRC101 0.90 MCAODC_12515 nudK GDP-mannose pyrophosphatase NudK 0.92 MCAODC_18510 xthA exodeoxyribonuclease III low > 87
Escherichia coli ECRC98 0.90 JDDGAC_25930 nudK GDP-mannose pyrophosphatase NudK 0.92 JDDGAC_01475 xthA exodeoxyribonuclease III low > 86
Escherichia coli ECRC102 0.90 NIAGMN_19755 nudK GDP-mannose pyrophosphatase NudK 0.92 NIAGMN_01165 xthA exodeoxyribonuclease III
Escherichia coli ECRC99 0.90 KEDOAH_06235 nudK GDP-mannose pyrophosphatase NudK 0.92 KEDOAH_01210 xthA exodeoxyribonuclease III
Enterobacter asburiae PDN3 0.83 EX28DRAFT_0194 nudix-type nucleoside diphosphatase, YffH/AdpP family 0.90 EX28DRAFT_1753 exodeoxyribonuclease III low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_03328 GDP-mannose pyrophosphatase NudK 0.90 MPMX20_01864 Exodeoxyribonuclease III low > 85
Klebsiella michiganensis M5al 0.80 BWI76_RS20845 GDP-mannose pyrophosphatase NudK 0.89 BWI76_RS11665 exodeoxyribonuclease III low > 92
Pantoea sp. MT58 0.69 IAI47_05335 GDP-mannose pyrophosphatase NudK 0.83 IAI47_08990 exodeoxyribonuclease III low > 76
Rahnella sp. WP5 0.67 EX31_RS22815 GDP-mannose pyrophosphatase NudK 0.81 EX31_RS06330 exodeoxyribonuclease III low > 89
Serratia liquefaciens MT49 0.67 IAI46_18645 GDP-mannose pyrophosphatase NudK 0.83 IAI46_14290 exodeoxyribonuclease III low > 86
Dickeya dianthicola ME23 0.66 DZA65_RS04260 GDP-mannose pyrophosphatase NudK 0.83 DZA65_RS10795 exodeoxyribonuclease III low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS04340 GDP-mannose pyrophosphatase NudK 0.83 HGI48_RS10320 exodeoxyribonuclease III low > 71
Dickeya dadantii 3937 0.66 DDA3937_RS04345 GDP-mannose pyrophosphatase NudK 0.83 DDA3937_RS10310 exodeoxyribonuclease III low > 74
Pectobacterium carotovorum WPP14 0.62 HER17_RS17390 GDP-mannose pyrophosphatase NudK 0.79 HER17_RS11085 exodeoxyribonuclease III low > 75
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_02692 nudix-type nucleoside diphosphatase, YffH/AdpP family 0.27 H281DRAFT_00456 Exodeoxyribonuclease III low > 103
Pseudomonas sp. RS175 0.52 PFR28_04570 GDP-mannose pyrophosphatase NudK 0.67 PFR28_02754 Exodeoxyribonuclease III low > 88
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_2669 GDP-mannose pyrophosphatase YffH 0.68 PfGW456L13_2599 Exodeoxyribonuclease III (EC 3.1.11.2) low > 87
Paraburkholderia graminis OAS925 0.51 ABIE53_006434 nudix-type nucleoside diphosphatase (YffH/AdpP family) 0.27 ABIE53_002802 exodeoxyribonuclease-3 low > 113
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_4229 GDP-mannose pyrophosphatase YffH 0.68 Pf6N2E2_142 Exodeoxyribonuclease III (EC 3.1.11.2) low > 103
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS08520 NUDIX domain-containing protein 0.28 QEN71_RS09020 exodeoxyribonuclease III low > 153
Acidovorax sp. GW101-3H11 0.51 Ac3H11_4083 GDP-mannose pyrophosphatase YffH 0.26 Ac3H11_4433 Exodeoxyribonuclease III (EC 3.1.11.2)
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_11785 GDP-mannose pyrophosphatase 0.68 AO356_01060 exonuclease III low > 104
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS24585 NUDIX hydrolase 0.27 BPHYT_RS12925 exodeoxyribonuclease III low > 109
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.1945.1 GDP-mannose pyrophosphatase YffH 0.27 Xcc-8004.5140.1 Exodeoxyribonuclease III (EC 3.1.11.2) low > 74
Caulobacter crescentus NA1000 0.49 CCNA_03645 nucleotide-sugar pyrophosphatase 0.26 CCNA_02090 exodeoxyribonuclease III low > 66
Caulobacter crescentus NA1000 Δfur 0.49 CCNA_03645 nucleotide-sugar pyrophosphatase 0.26 CCNA_02090 exodeoxyribonuclease III
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_27560 GDP-mannose pyrophosphatase 0.66 AO353_27875 exonuclease III low > 101
Variovorax sp. OAS795 0.46 ABID97_RS01680 GDP-mannose pyrophosphatase 0.28 ABID97_RS09955 exodeoxyribonuclease III low > 91
Pseudomonas fluorescens SBW25 0.46 PFLU_RS17595 GDP-mannose pyrophosphatase 0.67 PFLU_RS18930 exodeoxyribonuclease III low > 109
Pseudomonas simiae WCS417 0.46 PS417_15610 GDP-mannose pyrophosphatase 0.67 PS417_16980 exonuclease III low > 88
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS17595 GDP-mannose pyrophosphatase 0.67 PFLU_RS18930 exodeoxyribonuclease III low > 109
Variovorax sp. SCN45 0.45 GFF5518 Nudix hydrolase family protein KPN_02621 0.28 GFF3064 Exodeoxyribonuclease III (EC 3.1.11.2) low > 127
Agrobacterium fabrum C58 0.43 Atu4270 hypothetical protein 0.29 Atu1714 exonuclease III low > 89
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_4078 GDP-mannose pyrophosphatase YffH 0.67 Pf1N1B4_3995 Exodeoxyribonuclease III (EC 3.1.11.2)
Rhizobium sp. OAE497 0.39 ABIE40_RS06530 NUDIX domain-containing protein 0.28 ABIE40_RS08420 exodeoxyribonuclease III low > 107
Azospirillum sp. SherDot2 0.38 MPMX19_01599 GDP-mannose pyrophosphatase NudK 0.20 MPMX19_00040 Exodeoxyribonuclease III low > 112
Sinorhizobium meliloti 1021 0.37 SMc00610 hypothetical protein 0.27 SMc02077 exodeoxyribonuclease III protein low > 103

Not shown: 0 genomes with orthologs for GFF2192 only; 57 genomes with orthologs for GFF3490 only