Conservation of cofitness between GFF2904 and GFF3400 in Sphingobium sp. HT1-2

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF2904 Uncharacterized MFS-type transporter 1.0 GFF3400 L-lactate dehydrogenase low > 95
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_3645 Transmembrane secretion effector 0.65 Ga0059261_2629 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases low > 68
Caulobacter crescentus NA1000 Δfur 0.36 CCNA_00408 antiporter protein 0.65 CCNA_01209 L-lactate dehydrogenase low > 67
Caulobacter crescentus NA1000 0.36 CCNA_00408 antiporter protein 0.65 CCNA_01209 L-lactate dehydrogenase low > 66
Sinorhizobium meliloti 1021 0.35 SMc03237 transport transmembrane protein 0.44 SM_b20850 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) (from data) low > 103
Ralstonia solanacearum PSI07 0.32 RPSI07_RS05430 MFS transporter 0.44 RPSI07_RS14000 alpha-hydroxy-acid oxidizing protein low > 81
Rhizobium sp. OAE497 0.32 ABIE40_RS18095 MFS transporter 0.44 ABIE40_RS13790 alpha-hydroxy acid oxidase low > 107
Paraburkholderia graminis OAS925 0.31 ABIE53_001698 MFS family permease 0.36 ABIE53_005317 (S)-mandelate dehydrogenase low > 113
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS07025 MFS transporter 0.27 BPHYT_RS31690 hypothetical protein low > 109
Agrobacterium fabrum C58 0.30 Atu2659 MFS permease 0.46 Atu2318 L-lactate dehydrogenase low > 89
Magnetospirillum magneticum AMB-1 0.30 AMB_RS22000 MFS transporter 0.27 AMB_RS22540 alpha-hydroxy-acid oxidizing protein low > 64
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS11960 MFS transporter 0.77 A4249_RS07680 FMN-dependent L-lactate dehydrogenase LldD low > 48
Pseudomonas segetis P6 0.30 MPMX49_03995 Enterobactin exporter EntS 0.80 MPMX49_01172 L-lactate dehydrogenase low > 75
Azospirillum sp. SherDot2 0.29 MPMX19_05088 Enterobactin exporter EntS 0.42 MPMX19_04146 L-lactate dehydrogenase low > 112
Xanthobacter sp. DMC5 0.29 GFF4001 Enterobactin exporter EntS 0.76 GFF2176 L-lactate dehydrogenase — —
Pseudomonas putida KT2440 0.29 PP_4652 putative Membrane protein 0.79 PP_4736 L-lactate dehydrogenase low > 96
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS26275 MFS transporter 0.75 PFLU_RS21125 FMN-dependent L-lactate dehydrogenase LldD low > 109
Pseudomonas fluorescens SBW25 0.29 PFLU_RS26275 MFS transporter 0.75 PFLU_RS21125 FMN-dependent L-lactate dehydrogenase LldD low > 109
Pseudomonas sp. SVBP6 0.29 COO64_RS02880 MFS transporter 0.80 COO64_RS15315 lldD FMN-dependent L-lactate dehydrogenase LldD low > 93
Pseudomonas simiae WCS417 0.29 PS417_24355 MFS transporter 0.76 PS417_19130 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) (from data) low > 88
Pseudomonas lactucae CFBP13502 0.29 GEMAOFIL_05024 Enterobactin exporter EntS 0.72 GEMAOFIL_04053 L-lactate dehydrogenase low > 93
Pseudomonas sp. BP01 0.28 JOY50_RS27490 MFS transporter 0.79 JOY50_RS26700 lldD FMN-dependent L-lactate dehydrogenase LldD low > 84
Pseudomonas aeruginosa PA14 0.28 IKLFDK_00395 MFS transporter 0.79 IKLFDK_29735 FMN-dependent L-lactate dehydrogenase LldD low > 100
Rahnella sp. WP5 0.28 EX31_RS01120 MFS transporter 0.81 EX31_RS00640 FMN-dependent L-lactate dehydrogenase LldD low > 89
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_4288 protein of unknown function DUF894:Bacterial protein of unknown function DUF894 0.73 Psyr_0908 FMN-dependent alpha-hydroxy acid dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_4288 protein of unknown function DUF894:Bacterial protein of unknown function DUF894 0.73 Psyr_0908 FMN-dependent alpha-hydroxy acid dehydrogenase low > 86
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS13625 MFS transporter 0.43 HSERO_RS12985 L-lactate dehydrogenase low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF255 MFS permease 0.44 GFF2105 L-lactate dehydrogenase (EC 1.1.2.3) low > 90
Pantoea sp. MT58 0.26 IAI47_17575 MFS transporter 0.78 IAI47_15020 FMN-dependent L-lactate dehydrogenase LldD low > 76
Pantoea agglomerans CFBP13505 P0401 0.26 PagCFBP13505_RS09665 MFS transporter 0.79 PagCFBP13505_RS10140 alpha-hydroxy-acid oxidizing protein low > 74
Dyella japonica UNC79MFTsu3.2 0.26 ABZR86_RS12395 MFS transporter 0.45 ABZR86_RS01315 alpha-hydroxy acid oxidase low > 74
Pseudomonas sp. S08-1 0.25 OH686_23845 Uncharacterized MFS-type transporter 0.79 OH686_17010 L-lactate dehydrogenase low > 80
Cellulophaga baltica 18 0.25 M666_RS04295 MFS transporter 0.32 M666_RS00155 alpha-hydroxy acid oxidase low > 67
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.2311.1 Drug:proton antiporter 0.80 Xcc-8004.142.1 L-lactate dehydrogenase (EC 1.1.2.3) low > 74
Variovorax sp. OAS795 0.24 ABID97_RS21040 MFS transporter 0.43 ABID97_RS08010 alpha-hydroxy acid oxidase low > 91
Acidovorax sp. GW101-3H11 0.23 Ac3H11_3105 MFS general substrate transporter 0.41 Ac3H11_1623 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) (from data) low > 79
Variovorax sp. SCN45 0.23 GFF7037 Uncharacterized MFS-type transporter 0.43 GFF5984 L-lactate dehydrogenase low > 127
Acinetobacter baumannii LAC-4 0.22 RR41_RS16000 nickel resistance MFS transporter NreB 0.78 RR41_RS18505 FMN-dependent L-lactate dehydrogenase LldD low > 55
Acinetobacter radioresistens SK82 0.21 MPMX26_00559 Enterobactin exporter EntS 0.77 MPMX26_02257 L-lactate dehydrogenase low > 36
Methylophilus sp. DMC18 0.20 GFF2272 Enterobactin exporter EntS 0.26 GFF2539 4-hydroxymandelate oxidase low > 43
Pedobacter sp. GW460-11-11-14-LB5 0.19 CA265_RS22850 MFS transporter 0.28 CA265_RS08335 alpha-hydroxy-acid oxidizing enzyme low > 88
Azospirillum brasilense Sp245 0.07 AZOBR_RS29535 enterobactin exporter 0.31 AZOBR_RS27055 L-lactate dehydrogenase low > 97

Not shown: 21 genomes with orthologs for GFF2904 only; 28 genomes with orthologs for GFF3400 only