Conservation of cofitness between PS417_26370 and PS417_01340 in Pseudomonas simiae WCS417

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_26370 RNA helicase 1.0 PS417_01340 agmatine deiminase 0.38 13
Pseudomonas fluorescens SBW25 1.00 PFLU_RS28020 ATP-dependent RNA helicase DbpA 0.97 PFLU_RS01435 agmatine deiminase low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS28020 ATP-dependent RNA helicase DbpA 0.97 PFLU_RS01435 agmatine deiminase low > 109
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_13770 ATP-dependent RNA helicase 0.93 AO356_10030 Agmatine deiminase (EC 3.5.3.12) (from data) low > 104
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_4673 ATP-dependent 23S rRNA helicase DbpA 0.93 Pf6N2E2_3876 Agmatine deiminase (EC 3.5.3.12) low > 103
Pseudomonas sp. RS175 0.94 PFR28_04172 ATP-dependent RNA helicase DbpA 0.92 PFR28_04897 Agmatine deiminase low > 88
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_2412 ATP-dependent 23S rRNA helicase DbpA 0.94 Pf1N1B4_1661 Agmatine deiminase (EC 3.5.3.12) low > 87
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_1078 ATP-dependent 23S rRNA helicase DbpA 0.95 PfGW456L13_397 Agmatine deiminase (EC 3.5.3.12) low > 87
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_07850 ATP-dependent RNA helicase 0.94 AO353_11915 agmatine deiminase low > 101
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_0516 ATP-dependent RNA helicase DbpA 0.89 Psyr_4932 agmatine deiminase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_0516 ATP-dependent RNA helicase DbpA 0.89 Psyr_4932 agmatine deiminase low > 86
Pseudomonas putida KT2440 0.85 PP_4952 ATP-dependent RNA helicase, specific for 23S rRNA 0.85 PP_0266 Agmatine deiminase low > 96
Pseudomonas stutzeri RCH2 0.84 Psest_0344 Superfamily II DNA and RNA helicases 0.74 Psest_4291 agmatine deiminase low > 67
Pseudomonas sp. S08-1 0.74 OH686_14770 ATP-dependent 23S rRNA helicase DbpA 0.82 OH686_11505 agmatine deiminase low > 80
Marinobacter adhaerens HP15 0.59 HP15_1329 DEAD/DEAH box helicase domain protein 0.22 HP15_2073 peptidyl-arginine deiminase family protein low > 73
Serratia liquefaciens MT49 0.58 IAI46_14765 ATP-dependent RNA helicase DbpA 0.24 IAI46_12735 agmatine deiminase family protein low > 86
Pectobacterium carotovorum WPP14 0.57 HER17_RS06775 ATP-dependent RNA helicase DbpA 0.55 HER17_RS00785 agmatine deiminase low > 75
Variovorax sp. SCN45 0.55 GFF7138 ATP-dependent 23S rRNA helicase DbpA 0.27 GFF36 Similar to Agmatine deiminase low > 127
Rahnella sp. WP5 0.55 EX31_RS24740 ATP-dependent RNA helicase DbpA 0.53 EX31_RS21180 agmatine deiminase low > 89
Dyella japonica UNC79MFTsu3.2 0.54 ABZR86_RS05195 ATP-dependent RNA helicase DbpA 0.25 ABZR86_RS02780 agmatine/peptidylarginine deiminase — —
Shewanella amazonensis SB2B 0.53 Sama_0752 ATP-dependent RNA helicase DbpA (RefSeq) 0.54 Sama_2521 agmatine deiminase (RefSeq) low > 62
Shewanella sp. ANA-3 0.53 Shewana3_3384 ATP-dependent RNA helicase DbpA (RefSeq) 0.53 Shewana3_3465 agmatine deiminase (RefSeq) low > 73
Dickeya dadantii 3937 0.53 DDA3937_RS11045 ATP-dependent RNA helicase DbpA 0.53 DDA3937_RS00855 agmatine deiminase low > 74
Shewanella oneidensis MR-1 0.53 SO0897 dbpA ATP-dependent RNA helicase DbpA (NCBI ptt file) 0.53 SO_0887 agmatine deiminase (RefSeq) low > 76
Dickeya dianthicola 67-19 0.53 HGI48_RS11065 ATP-dependent RNA helicase DbpA 0.53 HGI48_RS20520 agmatine deiminase low > 71
Dickeya dianthicola ME23 0.53 DZA65_RS11470 ATP-dependent RNA helicase DbpA 0.53 DZA65_RS21565 agmatine deiminase low > 75
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_16320 dbpA ATP-dependent RNA helicase DbpA 0.24 OKGIIK_06975 Agmatine deiminase — —
Rhodanobacter denitrificans MT42 0.52 LRK55_RS09695 ATP-dependent RNA helicase DbpA 0.24 LRK55_RS00025 agmatine deiminase family protein — —
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS10055 ATP-dependent RNA helicase DbpA 0.24 LRK54_RS00335 agmatine deiminase family protein — —
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_2047 ATP-dependent RNA helicase DbpA (EC 5.99.1.-) 0.29 B158DRAFT_1812 Peptidylarginine deiminase and related enzymes low > 40
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.2274.1 ATP-dependent 23S rRNA helicase DbpA 0.23 Xcc-8004.2375.1 Agmatine deiminase (EC 3.5.3.12) — —
Lysobacter sp. OAE881 0.50 ABIE51_RS14930 ATP-dependent RNA helicase DbpA 0.25 ABIE51_RS09325 agmatine deiminase family protein — —
Alteromonas macleodii MIT1002 0.43 MIT1002_03748 ATP-independent RNA helicase DbpA 0.15 MIT1002_03760 Putative agmatine deiminase — —

Not shown: 35 genomes with orthologs for PS417_26370 only; 17 genomes with orthologs for PS417_01340 only