| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_0363 | | tripartite ATP-independent periplasmic transporter solute receptor, DctP family | 1.0 | Psest_2632 | | ribosomal protein S12 methylthiotransferase RimO | 0.18 | 18 |
| Pseudomonas putida KT2440 | 0.80 | PP_1169 | | D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) | 0.87 | PP_1197 | | ribosomal protein S12 methylthiotransferase | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.71 | Pf6N2E2_487 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.83 | Pf6N2E2_2978 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase | low | > 103 |
| Pseudomonas sp. RS175 | 0.71 | PFR28_02438 | | Solute-binding protein | 0.85 | PFR28_00486 | | Ribosomal protein S12 methylthiotransferase RimO | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.70 | PFLU_RS19295 | | TRAP transporter substrate-binding protein | 0.84 | PFLU_RS05950 | | 30S ribosomal protein S12 methylthiotransferase RimO | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.70 | Psyr_0900 | | TRAP dicarboxylate transporter- DctP subunit | 0.83 | Psyr_1392 | | SSU ribosomal protein S12P methylthiotransferase | low | > 86 |
| Pseudomonas simiae WCS417 | 0.70 | PS417_17370 | | C4-dicarboxylate ABC transporter | 0.85 | PS417_05880 | | ribosomal protein S12 methylthiotransferase | 0.18 | 21 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.70 | Psyr_0900 | | TRAP dicarboxylate transporter- DctP subunit | 0.83 | Psyr_1392 | | SSU ribosomal protein S12P methylthiotransferase | low | > 86 |
| Pseudomonas fluorescens SBW25 | 0.70 | PFLU_RS19295 | | TRAP transporter substrate-binding protein | 0.84 | PFLU_RS05950 | | 30S ribosomal protein S12 methylthiotransferase RimO | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.69 | AO356_23055 | | C4-dicarboxylate ABC transporter | 0.83 | AO356_05600 | | ribosomal protein S12 methylthiotransferase RimO | low | > 104 |
| Acidovorax sp. GW101-3H11 | 0.61 | Ac3H11_3957 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.61 | Ac3H11_364 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase | low | > 79 |
| Pectobacterium carotovorum WPP14 | 0.50 | HER17_RS19675 | | TRAP transporter substrate-binding protein | 0.71 | HER17_RS12755 | | 30S ribosomal protein S12 methylthiotransferase RimO | low | > 75 |
| Enterobacter sp. TBS_079 | 0.48 | MPMX20_04349 | | Solute-binding protein | 0.72 | MPMX20_01473 | | Ribosomal protein S12 methylthiotransferase RimO | low | > 85 |
| Bosea sp. OAE506 | 0.40 | ABIE41_RS07830 | | TRAP transporter substrate-binding protein | 0.68 | ABIE41_RS15895 | | 30S ribosomal protein S12 methylthiotransferase RimO | low | > 77 |
| Azospirillum brasilense Sp245 | 0.38 | AZOBR_RS30130 | | C4-dicarboxylate ABC transporter | 0.72 | AZOBR_RS14980 | | ribosomal protein S12 methylthiotransferase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.37 | MPMX19_05801 | | Solute-binding protein | 0.72 | MPMX19_05761 | | Ribosomal protein S12 methylthiotransferase RimO | 0.59 | 3 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.35 | H281DRAFT_05324 | | tripartite ATP-independent transporter solute receptor, DctP family | 0.64 | H281DRAFT_00855 | | SSU ribosomal protein S12P methylthiotransferase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.35 | ABIE53_006502 | | tripartite ATP-independent transporter DctP family solute receptor | 0.64 | ABIE53_002068 | | ribosomal protein S12 methylthiotransferase | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.34 | BPHYT_RS24175 | | C4-dicarboxylate ABC transporter | 0.65 | BPHYT_RS09170 | | ribosomal protein S12 methylthiotransferase RimO | — | — |
| Variovorax sp. OAS795 | 0.33 | ABID97_RS10340 | | TRAP transporter substrate-binding protein | 0.60 | ABID97_RS17220 | | 30S ribosomal protein S12 methylthiotransferase RimO | low | > 91 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.33 | GFF797 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.62 | GFF4923 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase | low | > 90 |
| Ralstonia sp. UNC404CL21Col | 0.33 | ABZR87_RS21090 | | TRAP transporter substrate-binding protein | 0.67 | ABZR87_RS13275 | | 30S ribosomal protein S12 methylthiotransferase RimO | low | > 80 |
| Variovorax sp. SCN45 | 0.33 | GFF2918 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.61 | GFF400 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) | low | > 127 |
| Alteromonas macleodii MIT1002 | 0.31 | MIT1002_02426 | | Extracytoplasmic solute receptor protein YiaO | 0.66 | MIT1002_01933 | | Ribosomal protein S12 methylthiotransferase RimO | low | > 70 |
| Escherichia coli ECRC62 | 0.31 | BNILDI_07130 | | Bacterial extracellular solute-binding protein, family 7 | 0.73 | BNILDI_20690 | rimO | 30S ribosomal protein S12 methylthiotransferase RimO | — | — |
| Klebsiella michiganensis M5al | 0.30 | BWI76_RS24125 | | hypothetical protein | 0.73 | BWI76_RS09115 | | 30S ribosomal protein S12 methylthiotransferase RimO | low | > 92 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.30 | OHPLBJKB_03838 | | Solute-binding protein | 0.73 | OHPLBJKB_02875 | | Ribosomal protein S12 methylthiotransferase RimO | low | > 73 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.30 | Echvi_3629 | | tripartite ATP-independent periplasmic transporter solute receptor, DctP family | 0.31 | Echvi_0564 | | ribosomal protein S12 methylthiotransferase RimO | low | > 79 |
| Escherichia coli ECOR38 | 0.30 | HEPCGN_18535 | | Bacterial extracellular solute-binding protein, family 7 | 0.73 | HEPCGN_01970 | rimO | 30S ribosomal protein S12 methylthiotransferase RimO | low | > 85 |
| Escherichia coli Nissle 1917 | 0.30 | ECOLIN_RS17380 | | TRAP transporter substrate-binding protein | 0.73 | ECOLIN_RS04440 | | 30S ribosomal protein S12 methylthiotransferase RimO | — | — |
| Escherichia coli ECOR27 | 0.30 | NOLOHH_11100 | | Bacterial extracellular solute-binding protein, family 7 | 0.73 | NOLOHH_22430 | rimO | 30S ribosomal protein S12 methylthiotransferase RimO | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.29 | GFF3130 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.73 | GFF731 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase | low | > 78 |
| Lysobacter sp. OAE881 | 0.29 | ABIE51_RS02850 | | TRAP transporter substrate-binding protein | 0.65 | ABIE51_RS08160 | | 30S ribosomal protein S12 methylthiotransferase RimO | low | > 62 |
| Ralstonia solanacearum GMI1000 | 0.11 | RS_RS10870 | | C4-dicarboxylate ABC transporter | 0.67 | RS_RS08245 | | 30S ribosomal protein S12 methylthiotransferase RimO | low | > 80 |
| Ralstonia solanacearum UW163 | 0.10 | UW163_RS10260 | | C4-dicarboxylate ABC transporter | 0.67 | UW163_RS14790 | | 30S ribosomal protein S12 methylthiotransferase RimO | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.10 | RALBFv3_RS03410 | | C4-dicarboxylate ABC transporter | 0.67 | RALBFv3_RS01480 | | 30S ribosomal protein S12 methylthiotransferase RimO | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.09 | RPSI07_RS13805 | | C4-dicarboxylate ABC transporter | 0.67 | RPSI07_RS16010 | | 30S ribosomal protein S12 methylthiotransferase RimO | low | > 81 |
Not shown: 8 genomes with orthologs for Psest_0363 only; 51 genomes with orthologs for Psest_2632 only