Conservation of cofitness between GFF1407 and GFF2462 in Hydrogenophaga sp. GW460-11-11-14-LB1

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF1407 Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) 1.0 GFF2462 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) 0.47 6
Acidovorax sp. GW101-3H11 0.55 Ac3H11_1367 Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) 0.56 Ac3H11_4323 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) low > 79
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS10220 flagellar rod assembly protein FlgJ 0.38 HSERO_RS07110 16S rRNA methyltransferase — —
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS28880 flagellar assembly peptidoglycan hydrolase FlgJ 0.44 QEN71_RS27020 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_05770 flagellar protein FlgJ 0.45 H281DRAFT_06311 16S rRNA (uracil1498-N3)-methyltransferase 0.44 39
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS18855 flagellar rod assembly protein FlgJ 0.41 BPHYT_RS16855 16S rRNA methyltransferase low > 109
Paraburkholderia graminis OAS925 0.34 ABIE53_000093 flagellar protein FlgJ 0.43 ABIE53_003540 16S rRNA (uracil1498-N3)-methyltransferase low > 113
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS35685 flagellar rod assembly protein FlgJ 0.41 RR42_RS17590 16S rRNA methyltransferase low > 128
Dechlorosoma suillum PS 0.32 Dsui_1740 flagellar rod assembly protein/muramidase FlgJ 0.34 Dsui_1568 RNA methyltransferase, RsmE family — —
Erwinia tracheiphila SCR3 0.32 LU632_RS10435 flgJ flagellar assembly peptidoglycan hydrolase FlgJ 0.33 LU632_RS05485 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 74
Escherichia coli BL21 0.32 ECD_01077 flagellar rod assembly protein and murein hydrolase; flagellum-specific muramidase 0.34 ECD_02776 16S rRNA m(3)U1498 methyltransferase, SAM-dependent low > 60
Escherichia coli BW25113 0.32 b1081 flgJ flagellar biosynthesis protein FlgJ (NCBI) 0.34 b2946 yggJ orf, hypothetical protein (VIMSS) low > 76
Escherichia fergusonii Becca 0.32 EFB2_02893 Peptidoglycan hydrolase FlgJ 0.34 EFB2_00956 Ribosomal RNA small subunit methyltransferase E low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_02584 Peptidoglycan hydrolase FlgJ 0.34 OHPLBJKB_00772 Ribosomal RNA small subunit methyltransferase E low > 73
Serratia liquefaciens MT49 0.32 IAI46_15920 flagellar assembly peptidoglycan hydrolase FlgJ 0.33 IAI46_21385 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 86
Escherichia coli ECRC62 0.31 BNILDI_19325 flgJ flagellar assembly peptidoglycan hydrolase FlgJ 0.34 BNILDI_09730 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli ECOR27 0.31 NOLOHH_21165 flgJ flagellar assembly peptidoglycan hydrolase FlgJ 0.34 NOLOHH_11150 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli Nissle 1917 0.31 ECOLIN_RS06255 flagellar assembly peptidoglycan hydrolase FlgJ 0.34 ECOLIN_RS16390 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Marinobacter adhaerens HP15 0.31 HP15_1475 flagellar rod assembly protein/muramidase FlgJ 0.36 HP15_2926 ribosomal RNA small subunit methyltransferase E low > 73
Escherichia coli ECRC102 0.31 NIAGMN_24195 flgJ flagellar assembly peptidoglycan hydrolase FlgJ 0.34 NIAGMN_17045 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli ECRC98 0.31 JDDGAC_07295 flgJ flagellar assembly peptidoglycan hydrolase FlgJ 0.34 JDDGAC_22910 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli ECRC99 0.31 KEDOAH_24120 flgJ flagellar assembly peptidoglycan hydrolase FlgJ 0.34 KEDOAH_08860 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli ECRC101 0.31 MCAODC_22995 flgJ flagellar assembly peptidoglycan hydrolase FlgJ 0.34 MCAODC_09800 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli ECRC101 0.31 OKFHMN_03635 flgJ flagellar assembly peptidoglycan hydrolase FlgJ 0.34 OKFHMN_19280 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Pectobacterium carotovorum WPP14 0.30 HER17_RS08205 flagellar assembly peptidoglycan hydrolase FlgJ 0.30 HER17_RS02640 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF3362 Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) 0.33 GFF3048 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) low > 78
Dickeya dadantii 3937 0.30 DDA3937_RS13440 flagellar assembly peptidoglycan hydrolase FlgJ 0.33 DDA3937_RS18555 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 74
Dickeya dianthicola 67-19 0.29 HGI48_RS13485 flagellar assembly peptidoglycan hydrolase FlgJ 0.32 HGI48_RS18490 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 71
Dickeya dianthicola ME23 0.29 DZA65_RS13970 flagellar assembly peptidoglycan hydrolase FlgJ 0.33 DZA65_RS19625 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 75
Pantoea sp. MT58 0.29 IAI47_12125 flagellar assembly peptidoglycan hydrolase FlgJ 0.31 IAI47_03620 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 76
Castellaniella sp019104865 MT123 0.29 ABCV34_RS05730 flagellar assembly peptidoglycan hydrolase FlgJ 0.29 ABCV34_RS15445 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 48
Variovorax sp. SCN45 0.29 GFF5723 Flagellar protein FlgJ [peptidoglycan hydrolase] 0.61 GFF3255 16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193) low > 127
Enterobacter asburiae PDN3 0.27 EX28DRAFT_1851 flagellar rod assembly protein/muramidase FlgJ 0.32 EX28DRAFT_2984 RNA methyltransferase, RsmE family low > 76
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_11185 flagellar assembly peptidoglycan hydrolase FlgJ 0.30 CSW01_02495 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 62
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS20115 flagellar assembly peptidoglycan hydrolase FlgJ 0.33 ABZR86_RS10230 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 74
Enterobacter sp. TBS_079 0.27 MPMX20_01760 Peptidoglycan hydrolase FlgJ 0.32 MPMX20_03804 Ribosomal RNA small subunit methyltransferase E low > 85
Alteromonas macleodii MIT1002 0.27 MIT1002_01049 Peptidoglycan hydrolase FlgJ 0.29 MIT1002_03054 Ribosomal RNA small subunit methyltransferase E low > 70
Rahnella sp. WP5 0.27 EX31_RS11275 flagellar assembly peptidoglycan hydrolase FlgJ 0.33 EX31_RS02660 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 89
Shewanella loihica PV-4 0.25 Shew_1353 flgJ peptidoglycan hydrolase (RefSeq) 0.29 Shew_3224 hypothetical protein (RefSeq) low > 60
Lysobacter sp. OAE881 0.23 ABIE51_RS16710 flagellar assembly peptidoglycan hydrolase FlgJ 0.26 ABIE51_RS05260 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 62
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_02690 flgJ flagellar assembly peptidoglycan hydrolase FlgJ 0.28 OKGIIK_11035 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 52

Not shown: 0 genomes with orthologs for GFF1407 only; 56 genomes with orthologs for GFF2462 only