Conservation of cofitness between GFF967 and GFF2286 in Sphingobium sp. HT1-2

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF967 Nucleoside-diphosphate-sugar epimerases 1.0 GFF2286 ATP-dependent Clp protease ATP-binding subunit ClpA 0.80 13
Sphingomonas koreensis DSMZ 15582 0.57 Ga0059261_2026 Nucleoside-diphosphate-sugar epimerases 0.85 Ga0059261_1001 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) low > 68
Magnetospirillum magneticum AMB-1 0.39 AMB_RS19790 NAD(P)-dependent oxidoreductase 0.70 AMB_RS05705 ATP-dependent Clp protease ATP-binding subunit ClpA low > 64
Azospirillum sp. SherDot2 0.38 MPMX19_02719 Protein YeeZ 0.68 MPMX19_00503 ATP-dependent Clp protease ATP-binding subunit ClpA low > 112
Azospirillum brasilense Sp245 0.38 AZOBR_RS17660 epimerase 0.69 AZOBR_RS05175 ATP-dependent Clp protease ATP-binding protein low > 97
Caulobacter crescentus NA1000 0.38 CCNA_01108 nucleoside-diphosphate-sugar epimerase 0.68 CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA low > 66
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_01108 nucleoside-diphosphate-sugar epimerase 0.68 CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA low > 67
Rhodospirillum rubrum S1H 0.37 Rru_A3378 hypothetical protein (NCBI) 0.68 Rru_A2109 ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI) low > 58
Dinoroseobacter shibae DFL-12 0.36 Dshi_3291 NAD-dependent epimerase/dehydratase (RefSeq) 0.66 Dshi_2939 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.36 PGA1_c34180 NAD dependent epimerase / dehydratase-like protein 0.66 PGA1_c25150 ATP-dependent Clp protease ATP-binding subunit — —
Bosea sp. OAE506 0.36 ABIE41_RS03140 SDR family oxidoreductase 0.67 ABIE41_RS18235 ATP-dependent Clp protease ATP-binding subunit ClpA low > 77
Rhodopseudomonas palustris CGA009 0.32 TX73_016560 SDR family oxidoreductase 0.68 TX73_016270 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Xanthobacter sp. DMC5 0.30 GFF3727 hypothetical protein 0.68 GFF1010 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Rhizobium sp. OAE497 0.29 ABIE40_RS01305 SDR family oxidoreductase 0.68 ABIE40_RS08865 ATP-dependent Clp protease ATP-binding subunit ClpA low > 107
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS11060 NAD(P)-dependent oxidoreductase 0.68 A4249_RS08390 ATP-dependent Clp protease ATP-binding subunit ClpA low > 48
Sinorhizobium meliloti 1021 0.29 SMc00405 hypothetical protein 0.66 SMc02109 ATP-dependent Clp protease ATP-binding subunit protein — —
Agrobacterium fabrum C58 0.27 Atu0291 hypothetical protein 0.66 Atu1364 ATP-dependent Clp protease, ATP-binding subunit low > 89
Pseudomonas syringae pv. syringae B728a 0.16 Psyr_0206 conserved hypothetical protein 0.58 Psyr_3183 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.16 Psyr_0206 conserved hypothetical protein 0.58 Psyr_3183 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Variovorax sp. OAS795 0.16 ABID97_RS07870 SDR family oxidoreductase 0.57 ABID97_RS16910 ATP-dependent Clp protease ATP-binding subunit ClpA low > 91
Pseudomonas sp. RS175 0.15 PFR28_04430 hypothetical protein 0.58 PFR28_02613 ATP-dependent Clp protease ATP-binding subunit ClpA low > 88
Pseudomonas fluorescens FW300-N2C3 0.15 AO356_12405 oxidoreductase 0.57 AO356_22150 ATP-dependent Clp protease ATP-binding subunit ClpA low > 104
Pseudomonas aeruginosa PA14 0.15 IKLFDK_26740 NAD(P)-dependent oxidoreductase 0.57 IKLFDK_13150 ATP-dependent Clp protease ATP-binding subunit ClpA low > 98
Pseudomonas aeruginosa PUPa3 0.15 DQ20_RS49520 SDR family oxidoreductase 0.57 DQ20_RS35145 clpA;go_component=endopeptidase ATP-dependent Clp protease ATP-binding subunit ClpA low > 101
Pseudomonas aeruginosa MRSN321 0.15 DY961_RS12605 SDR family oxidoreductase 0.57 DY961_RS04120 clpA;go_component=endopeptidase ATP-dependent Clp protease ATP-binding subunit ClpA low > 100
Pseudomonas segetis P6 0.15 ACVTMO_RS00190 SDR family oxidoreductase 0.57 ACVTMO_RS12615 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_4357 Nucleoside-diphosphate-sugar epimerases 0.57 Pf6N2E2_292 ATP-dependent Clp protease ATP-binding subunit ClpA low > 103
Pseudomonas fluorescens FW300-N1B4 0.14 Pf1N1B4_2110 Nucleoside-diphosphate-sugar epimerases 0.57 Pf1N1B4_4055 ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Pseudomonas fluorescens GW456-L13 0.14 PfGW456L13_777 Nucleoside-diphosphate-sugar epimerases 0.57 PfGW456L13_2646 ATP-dependent Clp protease ATP-binding subunit ClpA 0.48 5
Pseudomonas lactucae CFBP13502 0.14 GEMAOFIL_00037 hypothetical protein 0.57 GEMAOFIL_03629 ATP-dependent Clp protease ATP-binding subunit ClpA low > 96
Pseudomonas sp. S08-1 0.14 OH686_13530 Nucleoside-diphosphate-sugar 0.57 OH686_00235 ATP-dependent Clp protease ATP-binding subunit ClpA low > 80
Pseudomonas sp. DMC3 0.13 GFF422 hypothetical protein 0.58 GFF1525 ATP-dependent Clp protease ATP-binding subunit ClpA low > 89
Pseudomonas fluorescens SBW25 0.13 PFLU_RS29525 SDR family oxidoreductase 0.57 PFLU_RS18550 ATP-dependent Clp protease ATP-binding subunit ClpA low > 109
Pseudomonas fluorescens SBW25-INTG 0.13 PFLU_RS29525 SDR family oxidoreductase 0.57 PFLU_RS18550 ATP-dependent Clp protease ATP-binding subunit ClpA low > 109
Pseudomonas fluorescens FW300-N2E3 0.13 AO353_09295 oxidoreductase 0.57 AO353_27675 ATP-dependent Clp protease ATP-binding subunit ClpA low > 101
Pseudomonas orientalis W4I3 0.13 QF045_RS02200 SDR family oxidoreductase 0.58 QF045_RS18265 ATP-dependent Clp protease ATP-binding subunit ClpA low > 93
Pseudomonas putida KT2440 0.13 PP_5305 Epimerase/dehydratase-related protein 0.57 PP_4008 ATP-dependent serine protease low > 96
Pseudomonas sp. SVBP6 0.13 COO64_RS01570 SDR family oxidoreductase 0.57 COO64_RS24200 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 93
Acinetobacter radioresistens SK82 0.13 MPMX26_02731 hypothetical protein 0.55 MPMX26_01284 ATP-dependent Clp protease ATP-binding subunit ClpA low > 36
Pseudomonas sp. BP01 0.12 JOY50_RS08970 SDR family oxidoreductase 0.57 JOY50_RS06555 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 84
Pseudomonas simiae WCS417 0.12 PS417_27845 oxidoreductase 0.58 PS417_16510 Clp protease ClpX low > 88
Pseudomonas stutzeri RCH2 0.10 Psest_4190 Nucleoside-diphosphate-sugar epimerases 0.57 Psest_2027 ATP-dependent Clp protease ATP-binding subunit clpA low > 67

Not shown: 1 genomes with orthologs for GFF967 only; 65 genomes with orthologs for GFF2286 only