Conservation of cofitness between HP15_3407 and HP15_2202 in Marinobacter adhaerens HP15

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_3407 thiamine biosynthesis protein 1.0 HP15_2202 tRNA-(ms(2)io(6)a)-hydroxylase 0.48 8
Pseudomonas stutzeri RCH2 0.52 Psest_3927 thiazole biosynthesis/tRNA modification protein ThiI 0.57 Psest_2306 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA low > 67
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_341 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis 0.54 PfGW456L13_3375 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) — —
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_12175 tRNA s(4)U8 sulfurtransferase 0.54 AO353_22955 tRNA hydroxylase — —
Pseudomonas sp. S08-1 0.48 OH686_10615 tRNA 4-thiouridine synthase / Rhodanese-like domain required for thiamine synthesis 0.53 OH686_03955 tRNA-(ms[2]io[6]A)-hydroxylase low > 80
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_1604 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis 0.54 Pf1N1B4_4567 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) — —
Pseudomonas simiae WCS417 0.48 PS417_01660 tRNA s(4)U8 sulfurtransferase 0.54 PS417_14975 tRNA hydroxylase — —
Pseudomonas putida KT2440 0.48 PP_5045 tRNA sulfurtransferase 0.53 PP_2188 putative tRNA-(Ms(2)io(6)a)-hydroxylase low > 96
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_3819 Thiamine biosynthesis protein thiI 0.54 Pf6N2E2_568 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) — —
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_09700 tRNA s(4)U8 sulfurtransferase 0.54 AO356_24405 tRNA hydroxylase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_4816 [ThiS-adenylate] sulfurtransferase 0.55 Psyr_1728 tRNA--hydroxylase — —
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_4816 [ThiS-adenylate] sulfurtransferase 0.55 Psyr_1728 tRNA--hydroxylase — —
Pseudomonas fluorescens SBW25 0.48 PFLU_RS01715 tRNA 4-thiouridine(8) synthase ThiI 0.54 PFLU_RS17005 tRNA hydroxylase — —
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS01715 tRNA 4-thiouridine(8) synthase ThiI 0.54 PFLU_RS17005 tRNA hydroxylase — —
Pseudomonas sp. RS175 0.47 PFR28_04950 tRNA sulfurtransferase 0.54 PFR28_02373 hypothetical protein — —
Shewanella sp. ANA-3 0.46 Shewana3_2896 thiamine biosynthesis protein ThiI (RefSeq) 0.41 Shewana3_2667 tRNA hydroxylase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.46 SO1531 thiI thiamine biosynthesis protein ThiI (NCBI ptt file) 0.41 SO1788 miaE tRNA-(MS[2]IO[6]A)-hydroxylase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.46 Shew_2766 thiamine biosynthesis protein ThiI (RefSeq) 0.46 Shew_2514 tRNA--hydroxylase (RefSeq) low > 60
Rahnella sp. WP5 0.46 EX31_RS22170 tRNA 4-thiouridine(8) synthase ThiI 0.57 EX31_RS22630 tRNA-(ms[2]io[6]A)-hydroxylase low > 89
Serratia liquefaciens MT49 0.45 IAI46_04940 tRNA 4-thiouridine(8) synthase ThiI 0.46 IAI46_02330 tRNA-(ms[2]io[6]A)-hydroxylase low > 86
Dickeya dadantii 3937 0.45 DDA3937_RS05545 tRNA 4-thiouridine(8) synthase ThiI 0.44 DDA3937_RS05765 tRNA-(ms[2]io[6]A)-hydroxylase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF4327 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis 0.43 GFF942 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) low > 78
Shewanella amazonensis SB2B 0.45 Sama_2431 thiamine biosynthesis protein ThiI (RefSeq) 0.45 Sama_1218 tRNA-hydroxylase (RefSeq) — —
Klebsiella michiganensis M5al 0.44 BWI76_RS06395 tRNA 4-thiouridine(8) synthase ThiI 0.43 BWI76_RS03020 tRNA hydroxylase low > 92
Enterobacter asburiae PDN3 0.44 EX28DRAFT_2548 tRNA sulfurtransferase ThiI/thiazole biosynthesis domain 0.44 EX28DRAFT_3463 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA low > 76
Pantoea sp. MT58 0.43 IAI47_14725 tRNA 4-thiouridine(8) synthase ThiI 0.44 IAI47_16820 tRNA-(ms[2]io[6]A)-hydroxylase low > 76
Enterobacter sp. TBS_079 0.43 MPMX20_01014 tRNA sulfurtransferase 0.44 MPMX20_00558 hypothetical protein low > 85
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_04585 tRNA 4-thiouridine(8) synthase ThiI 0.40 CSW01_09555 tRNA-(ms[2]io[6]A)-hydroxylase low > 62

Not shown: 17 genomes with orthologs for HP15_3407 only; 8 genomes with orthologs for HP15_2202 only