Conservation of cofitness between Psest_2018 and Psest_2095 in Pseudomonas stutzeri RCH2

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2018 Uncharacterized conserved protein 1.0 Psest_2095 Arabinose efflux permease 0.30 12
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_27720 cupin 0.37 AO353_19740 MFS transporter low > 101
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_22095 cupin 0.36 AO356_21230 MFS transporter low > 104
Pseudomonas sp. RS175 0.83 PFR28_02622 50S ribosomal protein L16 3-hydroxylase 0.39 PFR28_02856 Inner membrane protein YbjJ — —
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_283 FIG002776: hypothetical protein 0.37 Pf6N2E2_32 Membrane protein mosC — —
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_3193 Transcription factor jumonji, jmjC 0.38 Psyr_3360 Major facilitator superfamily low > 86
Pseudomonas fluorescens SBW25 0.83 PFLU_RS18595 cupin domain-containing protein 0.38 PFLU_RS10350 MFS transporter low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_3193 Transcription factor jumonji, jmjC 0.38 Psyr_3360 Major facilitator superfamily low > 86
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS18595 cupin domain-containing protein 0.38 PFLU_RS10350 MFS transporter low > 109
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_2636 FIG002776: hypothetical protein 0.39 PfGW456L13_2443 Membrane protein mosC low > 87
Pseudomonas simiae WCS417 0.82 PS417_16555 cupin 0.36 PS417_09770 MFS transporter low > 88
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_4045 FIG002776: hypothetical protein 0.37 Pf1N1B4_115 Membrane protein mosC — —
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS05910 cupin domain-containing protein 0.24 ABZR86_RS08160 MFS transporter low > 74
Rhodanobacter denitrificans MT42 0.38 LRK55_RS00715 cupin domain-containing protein 0.27 LRK55_RS01620 MFS transporter low > 63
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS00940 cupin domain-containing protein 0.27 LRK54_RS01830 MFS transporter low > 59
Acinetobacter radioresistens SK82 0.34 MPMX26_01736 putative ribosomal oxygenase 0.35 MPMX26_02459 Inner membrane protein YbjJ low > 36
Enterobacter asburiae PDN3 0.33 EX28DRAFT_1802 Uncharacterized conserved protein 0.15 EX28DRAFT_2121 Fucose permease low > 76
Escherichia coli BW25113 0.32 b1128 ycfD orf, hypothetical protein (VIMSS) 0.16 b0845 ybjJ predicted transporter (NCBI) low > 76
Escherichia coli ECRC62 0.32 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.15 BNILDI_20640 ybjJ Inner membrane protein YbjJ — —
Escherichia coli ECOR38 0.32 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.16 HEPCGN_02020 ybjJ Inner membrane protein YbjJ low > 85
Escherichia coli ECOR27 0.32 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.15 NOLOHH_22380 ybjJ Inner membrane protein YbjJ low > 57
Escherichia coli BL21 0.32 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase 0.16 ECD_00812 putative drug efflux MFS transporter, inner membrane protein low > 60
Escherichia fergusonii Becca 0.32 EFB2_02847 50S ribosomal protein L16 3-hydroxylase 0.15 EFB2_03261 Inner membrane protein YbjJ low > 86
Escherichia coli Nissle 1917 0.32 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase 0.16 ECOLIN_RS04490 MFS transporter — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase 0.15 OHPLBJKB_02865 Inner membrane protein YbjJ low > 73
Enterobacter sp. TBS_079 0.32 MPMX20_01809 50S ribosomal protein L16 3-hydroxylase 0.15 MPMX20_01483 Inner membrane protein YbjJ low > 85
Escherichia coli ECRC98 0.32 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.16 JDDGAC_09645 ybjJ Inner membrane protein YbjJ — —
Escherichia coli ECRC102 0.32 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.16 NIAGMN_04055 ybjJ Inner membrane protein YbjJ — —
Escherichia coli ECRC101 0.32 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.16 OKFHMN_06010 ybjJ Inner membrane protein YbjJ — —
Escherichia coli ECRC101 0.32 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.16 MCAODC_25225 ybjJ Inner membrane protein YbjJ — —
Escherichia coli ECRC99 0.32 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.16 KEDOAH_21900 ybjJ Inner membrane protein YbjJ — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF3413 FIG002776: hypothetical protein 0.14 GFF749 Putative transport protein/putative regulator low > 78
Klebsiella michiganensis M5al 0.31 BWI76_RS11270 50S ribosomal protein L16 arginine hydroxylase 0.15 BWI76_RS09170 MFS transporter — —
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS06270 cupin 0.17 RR42_RS19595 amino acid ABC transporter permease low > 128
Dickeya dadantii 3937 0.31 DDA3937_RS11510 cupin domain-containing protein 0.33 DDA3937_RS11785 MFS transporter low > 74
Pectobacterium carotovorum WPP14 0.31 HER17_RS19385 cupin domain-containing protein 0.34 HER17_RS15565 MFS transporter low > 75
Erwinia tracheiphila SCR3 0.31 LU632_RS14600 cupin domain-containing protein 0.32 LU632_RS25535 MFS transporter low > 74
Serratia liquefaciens MT49 0.31 IAI46_10385 cupin domain-containing protein 0.34 IAI46_17440 MFS transporter low > 86
Dickeya dianthicola 67-19 0.31 HGI48_RS14985 cupin domain-containing protein 0.34 HGI48_RS11835 MFS transporter low > 71
Rahnella sp. WP5 0.31 EX31_RS23850 cupin domain-containing protein 0.27 EX31_RS01055 MFS transporter low > 89
Dickeya dianthicola ME23 0.31 DZA65_RS15735 cupin domain-containing protein 0.35 DZA65_RS12370 MFS transporter low > 75
Pantoea sp. MT58 0.30 IAI47_11940 cupin domain-containing protein 0.31 IAI47_06485 MFS transporter low > 76
Shewanella amazonensis SB2B 0.27 Sama_2065 cupin 4 (RefSeq) 0.29 Sama_2920 major facilitator transporter (RefSeq) low > 62

Not shown: 10 genomes with orthologs for Psest_2018 only; 25 genomes with orthologs for Psest_2095 only