Conservation of cofitness between GFF967 and GFF2007 in Sphingobium sp. HT1-2

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF967 Nucleoside-diphosphate-sugar epimerases 1.0 GFF2007 Phosphoenolpyruvate-protein phosphotransferase, nitrogen regulation associated 0.78 19
Sphingomonas koreensis DSMZ 15582 0.57 Ga0059261_2026 Nucleoside-diphosphate-sugar epimerases 0.74 Ga0059261_2514 phosphoenolpyruvate-protein phosphotransferase low > 68
Magnetospirillum magneticum AMB-1 0.39 AMB_RS19790 NAD(P)-dependent oxidoreductase 0.44 AMB_RS08150 phosphoenolpyruvate--protein phosphotransferase low > 64
Azospirillum brasilense Sp245 0.38 AZOBR_RS17660 epimerase 0.44 AZOBR_RS18900 peptidase low > 97
Azospirillum sp. SherDot2 0.38 MPMX19_02719 Protein YeeZ 0.43 MPMX19_02675 Phosphoenolpyruvate-dependent phosphotransferase system low > 112
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_01108 nucleoside-diphosphate-sugar epimerase 0.44 CCNA_00892 phosphoenolpyruvate-protein phosphotransferase PtsP low > 67
Caulobacter crescentus NA1000 0.38 CCNA_01108 nucleoside-diphosphate-sugar epimerase 0.44 CCNA_00892 phosphoenolpyruvate-protein phosphotransferase PtsP low > 66
Rhodospirillum rubrum S1H 0.37 Rru_A3378 hypothetical protein (NCBI) 0.42 Rru_A0745 PTSINtr with GAF domain, PtsP (NCBI) low > 58
Dinoroseobacter shibae DFL-12 0.36 Dshi_3291 NAD-dependent epimerase/dehydratase (RefSeq) 0.38 Dshi_2062 PTSINtr with GAF domain, PtsP (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.36 PGA1_c34180 NAD dependent epimerase / dehydratase-like protein 0.37 PGA1_c23500 phosphoenolpyruvate-protein phosphotransferase PtsP — —
Bosea sp. OAE506 0.36 ABIE41_RS03140 SDR family oxidoreductase 0.45 ABIE41_RS23820 phosphoenolpyruvate--protein phosphotransferase low > 77
Rhodopseudomonas palustris CGA009 0.32 TX73_016560 SDR family oxidoreductase 0.47 TX73_003130 phosphoenolpyruvate--protein phosphotransferase low > 86
Xanthobacter sp. DMC5 0.30 GFF3727 hypothetical protein 0.45 GFF1659 Phosphoenolpyruvate-dependent phosphotransferase system — —
Rhizobium sp. OAE497 0.29 ABIE40_RS01305 SDR family oxidoreductase 0.45 ABIE40_RS17300 phosphoenolpyruvate--protein phosphotransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS11060 NAD(P)-dependent oxidoreductase 0.44 A4249_RS14485 phosphoenolpyruvate--protein phosphotransferase low > 48
Sinorhizobium meliloti 1021 0.29 SMc00405 hypothetical protein 0.45 SMc02437 phosphoenolpyruvate phosphotransferase PTSP (enzyme I-Ntr) protein — —
Agrobacterium fabrum C58 0.27 Atu0291 hypothetical protein 0.43 Atu4173 phosphoenolpyruvate-protein phosphotransferase low > 89
Pseudomonas syringae pv. syringae B728a 0.16 Psyr_0206 conserved hypothetical protein 0.24 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.16 Psyr_0206 conserved hypothetical protein 0.24 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase low > 86
Pseudomonas sp. RS175 0.15 PFR28_04430 hypothetical protein 0.24 PFR28_04830 Phosphoenolpyruvate-dependent phosphotransferase system low > 88
Pseudomonas fluorescens FW300-N2C3 0.15 AO356_12405 oxidoreductase 0.24 AO356_10350 phosphoenolpyruvate-protein phosphotransferase low > 104
Pseudomonas aeruginosa PA14 0.15 IKLFDK_26740 NAD(P)-dependent oxidoreductase 0.23 IKLFDK_23750 phosphoenolpyruvate--protein phosphotransferase low > 98
Pseudomonas aeruginosa PUPa3 0.15 DQ20_RS49520 SDR family oxidoreductase 0.23 DQ20_RS37640 ptsP;inference=COORDINATES phosphoenolpyruvate--protein phosphotransferase low > 101
Pseudomonas aeruginosa MRSN321 0.15 DY961_RS12605 SDR family oxidoreductase 0.23 DY961_RS21655 ptsP;inference=COORDINATES phosphoenolpyruvate--protein phosphotransferase low > 100
Pseudomonas segetis P6 0.15 MPMX49_00038 hypothetical protein 0.23 MPMX49_00587 Phosphoenolpyruvate-dependent phosphotransferase system low > 75
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_4357 Nucleoside-diphosphate-sugar epimerases 0.24 Pf6N2E2_3942 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 103
Pseudomonas fluorescens FW300-N1B4 0.14 Pf1N1B4_2110 Nucleoside-diphosphate-sugar epimerases 0.24 Pf1N1B4_2284 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 87
Pseudomonas fluorescens GW456-L13 0.14 PfGW456L13_777 Nucleoside-diphosphate-sugar epimerases 0.24 PfGW456L13_953 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 87
Pseudomonas sp. S08-1 0.14 OH686_13530 Nucleoside-diphosphate-sugar 0.24 OH686_11430 Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 80
Pseudomonas lactucae CFBP13502 0.14 GEMAOFIL_00037 hypothetical protein 0.24 GEMAOFIL_05538 Phosphoenolpyruvate-dependent phosphotransferase system low > 96
Pseudomonas sp. DMC3 0.13 GFF422 hypothetical protein 0.24 GFF264 Phosphoenolpyruvate-dependent phosphotransferase system low > 89
Pseudomonas fluorescens SBW25 0.13 PFLU_RS29525 SDR family oxidoreductase 0.24 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.13 PFLU_RS29525 SDR family oxidoreductase 0.24 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase low > 109
Pseudomonas orientalis W4I3 0.13 QF045_RS02200 SDR family oxidoreductase 0.24 QF045_RS01375 phosphoenolpyruvate--protein phosphotransferase low > 93
Pseudomonas fluorescens FW300-N2E3 0.13 AO353_09295 oxidoreductase 0.24 AO353_08465 phosphoenolpyruvate-protein phosphotransferase low > 101
Pseudomonas sp. SVBP6 0.13 COO64_RS01570 SDR family oxidoreductase 0.24 COO64_RS12700 ptsP phosphoenolpyruvate--protein phosphotransferase low > 93
Pseudomonas putida KT2440 0.13 PP_5305 Epimerase/dehydratase-related protein 0.24 PP_5145 phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) low > 96
Acinetobacter radioresistens SK82 0.13 MPMX26_02731 hypothetical protein 0.22 MPMX26_00341 Phosphoenolpyruvate-dependent phosphotransferase system low > 36
Pseudomonas sp. BP01 0.12 JOY50_RS08970 SDR family oxidoreductase 0.24 JOY50_RS20665 ptsP phosphoenolpyruvate--protein phosphotransferase low > 84
Pseudomonas simiae WCS417 0.12 PS417_27845 oxidoreductase 0.24 PS417_26985 phosphoenolpyruvate-protein phosphotransferase low > 88
Pseudomonas stutzeri RCH2 0.10 Psest_4190 Nucleoside-diphosphate-sugar epimerases 0.24 Psest_3862 phosphoenolpyruvate-protein phosphotransferase low > 67

Not shown: 2 genomes with orthologs for GFF967 only; 37 genomes with orthologs for GFF2007 only