Conservation of cofitness between Psest_0956 and Psest_1635 in Pseudomonas stutzeri RCH2

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0956 Transcriptional regulators 1.0 Psest_1635 Signal transduction histidine kinase 0.34 15
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS25940 FCD domain-containing protein 0.68 PFLU_RS18410 response regulator low > 109
Pseudomonas fluorescens SBW25 0.79 PFLU_RS25940 FCD domain-containing protein 0.68 PFLU_RS18410 response regulator low > 109
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_5113 Lactate-responsive regulator LldR in Enterobacteria, GntR family 0.68 PfGW456L13_2029 BarA sensory histidine kinase (= VarS = GacS) low > 87
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_1185 Lactate-responsive regulator LldR in Enterobacteria, GntR family 0.67 Pf1N1B4_3501 BarA sensory histidine kinase (= VarS = GacS) 0.52 11
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_05695 transcriptional regulator PdhR 0.68 AO353_02735 chemotaxis protein CheY low > 101
Pseudomonas sp. RS175 0.77 PFR28_00064 Pyruvate dehydrogenase complex repressor 0.67 PFR28_03227 Signal transduction histidine-protein kinase BarA low > 88
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_07545 transcriptional regulator PdhR 0.68 AO356_19045 chemotaxis protein CheY low > 104
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_3379 Lactate-responsive regulator LldR in Enterobacteria, GntR family 0.68 Pf6N2E2_5720 BarA sensory histidine kinase (= VarS = GacS) low > 103
Pseudomonas putida KT2440 0.75 PP_4734 DNA-binding transcriptional dual regulator, LldR-L-lactate 0.60 PP_1650 Sensor protein GacS 0.24 7
Pseudomonas sp. S08-1 0.75 OH686_17020 Lactate-responsive regulator LldR in Enterobacteria, GntR family 0.68 OH686_18945 Signal transduction histidine-protein kinase BarA low > 80
Pseudomonas simiae WCS417 0.74 PS417_24100 transcriptional regulator PdhR 0.68 PS417_16370 chemotaxis protein CheY low > 88
Marinobacter adhaerens HP15 0.60 HP15_4087 transcriptional regulator, GntR family 0.34 HP15_788 multi-sensor hybrid histidine kinase low > 73
Escherichia coli ECRC99 0.41 KEDOAH_17645 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.29 KEDOAH_07890 barA two-component sensor histidine kinase BarA — —
Enterobacter asburiae PDN3 0.41 EX28DRAFT_3708 Transcriptional regulators 0.29 EX28DRAFT_2866 Uncharacterized domain of BarA-like signal transduction histidine kinases low > 76
Escherichia coli BW25113 0.41 b0113 pdhR transcriptional regulator of pyruvate dehydrogenase complex (NCBI) 0.29 b2786 barA hybrid sensory histidine kinase, in two-component regulatory system with UvrY (NCBI) low > 76
Escherichia coli ECRC98 0.41 JDDGAC_14105 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.29 JDDGAC_23905 barA two-component sensor histidine kinase BarA — —
Escherichia coli Nissle 1917 0.41 ECOLIN_RS00635 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.29 ECOLIN_RS15525 two-component sensor histidine kinase BarA low > 52
Escherichia coli ECRC101 0.41 OKFHMN_10510 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.29 OKFHMN_20240 barA two-component sensor histidine kinase BarA — —
Escherichia fergusonii Becca 0.41 EFB2_03932 Pyruvate dehydrogenase complex repressor 0.29 EFB2_01131 Signal transduction histidine-protein kinase BarA low > 86
Escherichia coli BL21 0.41 ECD_00112 pyruvate dehydrogenase complex repressor; autorepressor 0.29 ECD_02631 hybrid sensory histidine kinase, in two-component regulatory system with UvrY low > 60
Escherichia coli ECOR27 0.41 NOLOHH_02855 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.29 NOLOHH_12115 barA two-component sensor histidine kinase BarA low > 57
Escherichia coli ECOR38 0.41 HEPCGN_08490 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.29 HEPCGN_19490 barA two-component sensor histidine kinase BarA low > 85
Escherichia coli ECRC62 0.41 BNILDI_08755 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.29 BNILDI_10620 barA two-component sensor histidine kinase BarA — —
Escherichia coli ECRC101 0.41 MCAODC_01025 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.29 MCAODC_10765 barA two-component sensor histidine kinase BarA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_03548 Pyruvate dehydrogenase complex repressor 0.29 OHPLBJKB_00945 Signal transduction histidine-protein kinase BarA low > 73
Escherichia coli ECRC102 0.41 NIAGMN_08360 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.29 NIAGMN_18010 barA two-component sensor histidine kinase BarA — —
Enterobacter sp. TBS_079 0.41 MPMX20_00806 Pyruvate dehydrogenase complex repressor 0.30 MPMX20_03655 Signal transduction histidine-protein kinase BarA low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF123 Transcriptional repressor for pyruvate dehydrogenase complex 0.29 GFF4839 BarA sensory histidine kinase (= VarS = GacS) low > 78
Serratia liquefaciens MT49 0.41 IAI46_21330 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.27 IAI46_03590 two-component sensor histidine kinase BarA low > 86
Dickeya dianthicola ME23 0.40 DZA65_RS19005 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.28 DZA65_RS18155 two-component sensor histidine kinase BarA low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS17930 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.28 DDA3937_RS17025 two-component sensor histidine kinase BarA low > 74
Rahnella sp. WP5 0.40 EX31_RS03485 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.27 EX31_RS07965 two-component sensor histidine kinase BarA low > 89
Dickeya dianthicola 67-19 0.40 HGI48_RS17855 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.28 HGI48_RS17080 two-component sensor histidine kinase BarA low > 71
Pantoea sp. MT58 0.40 IAI47_15815 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.27 IAI47_04110 two-component sensor histidine kinase BarA low > 76
Klebsiella michiganensis M5al 0.40 BWI76_RS04875 transcriptional regulator PdhR 0.29 BWI76_RS22815 hybrid sensor histidine kinase/response regulator low > 92
Pectobacterium carotovorum WPP14 0.39 HER17_RS03285 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.26 HER17_RS04105 two-component sensor histidine kinase BarA low > 75
Shewanella amazonensis SB2B 0.39 Sama_0374 pdhR transcriptional regulator PdhR (RefSeq) 0.27 Sama_1031 hybrid sensory histidine kinase BarA (RefSeq) low > 62
Shewanella oneidensis MR-1 0.39 SO0423 pdhR pyruvate dehydrogenase complex repressor (NCBI ptt file) 0.28 SO_3457 hybrid sensory histidine kinase BarA (RefSeq) low > 76
Shewanella sp. ANA-3 0.39 Shewana3_0425 pdhR transcriptional regulator PdhR (RefSeq) 0.28 Shewana3_1109 hybrid sensory histidine kinase BarA (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_12225 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.28 CSW01_12415 two-component sensor histidine kinase BarA low > 62
Shewanella loihica PV-4 0.38 Shew_3432 pdhR transcriptional regulator PdhR (RefSeq) 0.30 Shew_1200 hybrid sensory histidine kinase BarA (RefSeq) low > 60
Acinetobacter radioresistens SK82 0.28 MPMX26_02258 Putative L-lactate dehydrogenase operon regulatory protein 0.22 MPMX26_00535 Signal transduction histidine-protein kinase BarA 0.56 36

Not shown: 24 genomes with orthologs for Psest_0956 only; 3 genomes with orthologs for Psest_1635 only