Conservation of cofitness between Psest_2072 and Psest_1532 in Pseudomonas stutzeri RCH2

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2072 Methyltransferase domain. 1.0 Psest_1532 DNA recombination-dependent growth factor C 0.37 9
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_1762 conserved hypothetical protein 0.85 Psyr_1588 Putative exonuclease, RdgC low > 86
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_1762 conserved hypothetical protein 0.85 Psyr_1588 Putative exonuclease, RdgC low > 86
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_3339 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) 0.84 PfGW456L13_4216 DNA recombination-dependent growth factor C low > 87
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_4597 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) 0.84 Pf1N1B4_3731 DNA recombination-dependent growth factor C — —
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_23495 SAM-dependent methyltransferase 0.85 AO353_02515 recombination-associated protein RdgC low > 101
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_588 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) 0.86 Pf6N2E2_5768 DNA recombination-dependent growth factor C — —
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_24485 SAM-dependent methyltransferase 0.86 AO356_19265 recombination-associated protein RdgC low > 104
Pseudomonas simiae WCS417 0.65 PS417_12225 SAM-dependent methyltransferase 0.83 PS417_09245 recombinase RdgC — —
Pseudomonas sp. RS175 0.65 PFR28_01553 hypothetical protein 0.85 PFR28_03182 Recombination-associated protein RdgC low > 88
Pseudomonas fluorescens SBW25 0.65 PFLU_RS12915 methyltransferase domain-containing protein 0.84 PFLU_RS09255 recombination-associated protein RdgC low > 109
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS12915 methyltransferase domain-containing protein 0.84 PFLU_RS09255 recombination-associated protein RdgC low > 109
Pseudomonas sp. S08-1 0.63 OH686_03575 SAM-dependent methyltransferase 0.80 OH686_19640 DNA recombination-dependent growth factor RdgC low > 80
Pseudomonas putida KT2440 0.61 PP_4143 conserved protein of unknown function 0.81 PP_1702 Recombination-associated protein RdgC low > 96
Dechlorosoma suillum PS 0.22 Dsui_2483 methylase involved in ubiquinone/menaquinone biosynthesis 0.31 Dsui_2147 DNA recombination-dependent growth factor C — —
Castellaniella sp019104865 MT123 0.21 ABCV34_RS10480 methyltransferase domain-containing protein 0.31 ABCV34_RS04480 recombination-associated protein RdgC — —
Variovorax sp. SCN45 0.21 GFF1117 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) 0.25 GFF5080 DNA recombination-dependent growth factor RdgC low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.20 GFF4258 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) 0.25 GFF5355 DNA recombination-dependent growth factor C — —
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS17115 methyltransferase type 11 0.31 HSERO_RS21640 recombinase RdgC — —
Marinobacter adhaerens HP15 0.19 HP15_1804 generic methyl-transferase 0.45 HP15_1221 recombination-associated protein rdgC low > 73
Shewanella amazonensis SB2B 0.15 Sama_1883 hypothetical protein (RefSeq) 0.42 Sama_1072 rdgC recombination associated protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.14 SO2562 conserved hypothetical protein (NCBI ptt file) 0.40 SO1556 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.14 Shewana3_2368 methyltransferase type 11 (RefSeq) 0.40 Shewana3_2881 rdgC recombination associated protein (RefSeq) low > 73
Escherichia coli ECRC101 0.13 MCAODC_00490 yafS Uncharacterized protein YafS 0.46 MCAODC_27795 rdgC recombination-associated protein RdgC — —
Escherichia coli ECRC101 0.13 OKFHMN_09975 yafS Uncharacterized protein YafS 0.46 OKFHMN_08570 rdgC recombination-associated protein RdgC — —
Escherichia coli ECRC102 0.13 NIAGMN_07825 yafS Uncharacterized protein YafS 0.46 NIAGMN_06625 rdgC recombination-associated protein RdgC — —
Escherichia coli ECRC98 0.13 JDDGAC_13570 yafS Uncharacterized protein YafS 0.46 JDDGAC_12225 rdgC recombination-associated protein RdgC — —
Escherichia coli ECRC99 0.13 KEDOAH_18180 yafS Uncharacterized protein YafS 0.46 KEDOAH_19395 rdgC recombination-associated protein RdgC — —
Escherichia coli ECOR38 0.13 HEPCGN_07915 yafS Uncharacterized protein YafS 0.46 HEPCGN_07210 rdgC recombination-associated protein RdgC low > 85
Escherichia fergusonii Becca 0.13 EFB2_03830 hypothetical protein 0.46 EFB2_03663 Recombination-associated protein RdgC low > 86
Escherichia coli Nissle 1917 0.13 ECOLIN_RS01165 class I SAM-dependent methyltransferase 0.46 ECOLIN_RS02385 recombination-associated protein RdgC low > 52
Escherichia coli BW25113 0.13 b0213 yafS orf, hypothetical protein (VIMSS) 0.46 b0393 rdgC recombination associated protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.13 OHPLBJKB_03448 hypothetical protein 0.46 OHPLBJKB_03282 Recombination-associated protein RdgC low > 73
Pantoea sp. MT58 0.13 IAI47_15335 class I SAM-dependent methyltransferase 0.46 IAI47_14910 recombination-associated protein RdgC low > 76
Escherichia coli BL21 0.12 ECD_00206 putative S-adenosyl-L-methionine-dependent methyltransferase 0.46 ECD_00342 nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function 0.69 42
Escherichia coli ECOR27 0.12 NOLOHH_02320 yafS Uncharacterized protein YafS 0.46 NOLOHH_01500 rdgC recombination-associated protein RdgC low > 57
Escherichia coli ECRC62 0.12 BNILDI_09350 yafS Uncharacterized protein YafS 0.46 BNILDI_22915 rdgC recombination-associated protein RdgC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.12 GFF4045 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) 0.45 GFF4290 DNA recombination-dependent growth factor C low > 78
Rahnella sp. WP5 0.11 EX31_RS21195 class I SAM-dependent methyltransferase 0.46 EX31_RS21990 recombination-associated protein RdgC low > 89
Kangiella aquimarina DSM 16071 0.10 B158DRAFT_1062 Methylase involved in ubiquinone/menaquinone biosynthesis 0.24 B158DRAFT_1192 DNA recombination-dependent growth factor C low > 40

Not shown: 2 genomes with orthologs for Psest_2072 only; 28 genomes with orthologs for Psest_1532 only