Conservation of cofitness between PS417_25765 and PS417_07550 in Pseudomonas simiae WCS417

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_25765 transcriptional regulator 1.0 PS417_07550 lytic transglycosylase 0.19 17
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS27420 response regulator transcription factor 1.00 PFLU_RS07630 transglycosylase SLT domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS27420 response regulator transcription factor 1.00 PFLU_RS07630 transglycosylase SLT domain-containing protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_2537 DNA-binding response regulator, LuxR family, near polyamine transporter 0.85 Pf1N1B4_3898 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) 0.20 72
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_07270 transcriptional regulator 0.83 AO353_00530 lytic transglycosylase low > 101
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_4814 DNA-binding response regulator, LuxR family, near polyamine transporter 0.86 Pf6N2E2_2294 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 103
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_1209 DNA-binding response regulator, LuxR family, near polyamine transporter 0.85 PfGW456L13_4045 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 87
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_14380 transcriptional regulator 0.86 AO356_02350 lytic transglycosylase low > 104
Pseudomonas sp. RS175 0.97 PFR28_04055 Response regulator UvrY 0.86 PFR28_01106 Soluble lytic murein transglycosylase low > 88
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_4618 regulatory protein, LuxR:Response regulator receiver 0.81 Psyr_3295 SLT low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_4618 regulatory protein, LuxR:Response regulator receiver 0.81 Psyr_3295 SLT low > 86
Pseudomonas sp. S08-1 0.89 OH686_15085 DNA-binding response regulator, LuxR family, near polyamine transporter 0.75 OH686_21900 Soluble lytic murein transglycosylase low > 80
Pseudomonas putida KT2440 0.86 PP_0410 DNA-binding response regulator UhpA 0.82 PP_2130 putative Soluble lytic transglycosylase low > 96
Pseudomonas stutzeri RCH2 0.84 Psest_3659 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 0.71 Psest_1844 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) low > 67
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS30900 transcriptional regulator 0.17 BPHYT_RS18610 lytic transglycosylase low > 109
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS32080 response regulator transcription factor 0.18 QEN71_RS28635 lytic transglycosylase domain-containing protein low > 153
Paraburkholderia graminis OAS925 0.52 ABIE53_004191 DNA-binding NarL/FixJ family response regulator 0.17 ABIE53_000044 soluble lytic murein transglycosylase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_03107 two component transcriptional regulator, LuxR family 0.17 H281DRAFT_05816 soluble lytic murein transglycosylase
Dechlorosoma suillum PS 0.52 Dsui_3469 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 0.17 Dsui_0683 soluble lytic murein transglycosylase-like protein low > 51
Dickeya dianthicola ME23 0.48 DZA65_RS12190 response regulator transcription factor 0.21 DZA65_RS19525 murein transglycosylase low > 75
Dickeya dianthicola 67-19 0.48 HGI48_RS11705 response regulator 0.22 HGI48_RS18385 murein transglycosylase low > 71
Erwinia tracheiphila SCR3 0.48 LU632_RS03195 response regulator transcription factor 0.20 LU632_RS02575 sltY murein transglycosylase low > 74
Pectobacterium carotovorum WPP14 0.47 HER17_RS10030 response regulator transcription factor 0.21 HER17_RS02750 murein transglycosylase low > 75
Dickeya dadantii 3937 0.47 DDA3937_RS11645 response regulator transcription factor 0.22 DDA3937_RS18455 murein transglycosylase low > 74
Ralstonia solanacearum GMI1000 0.42 RS_RS01435 DNA-binding response regulator 0.17 RS_RS00445 lytic transglycosylase low > 80
Ralstonia solanacearum UW163 0.42 UW163_RS02980 DNA-binding response regulator 0.17 UW163_RS03720 lytic transglycosylase
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS10600 DNA-binding response regulator 0.17 RALBFv3_RS09860 lytic transglycosylase low > 76
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS13890 LuxR family transcriptional regulator 0.15 HSERO_RS21415 lytic transglycosylase low > 78
Ralstonia solanacearum PSI07 0.42 RPSI07_RS22720 DNA-binding response regulator 0.17 RPSI07_RS23510 lytic transglycosylase low > 81
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS06400 response regulator transcription factor 0.17 ABZR87_RS04885 lytic transglycosylase domain-containing protein low > 80
Acidovorax sp. GW101-3H11 0.41 Ac3H11_3852 DNA-binding response regulator, LuxR family 0.17 Ac3H11_1834 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)
Variovorax sp. OAS795 0.41 ABID97_RS07360 response regulator transcription factor 0.17 ABID97_RS06595 transglycosylase SLT domain-containing protein low > 91
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS00785 LuxR family transcriptional regulator 0.17 RR42_RS01405 lytic transglycosylase low > 128
Variovorax sp. SCN45 0.41 GFF2564 Two-component transcriptional response regulator, LuxR family 0.17 GFF5163 Soluble lytic murein transglycosylase (EC 4.2.2.n1) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF2789 DNA-binding response regulator, LuxR family 0.17 GFF1614 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 90
Escherichia coli BL21 0.32 ECD_03553 response regulator in two-component regulatory system wtih UhpB 0.23 ECD_04268 lytic murein transglycosylase, soluble low > 60

Not shown: 7 genomes with orthologs for PS417_25765 only; 33 genomes with orthologs for PS417_07550 only