Conservation of cofitness between PS417_07150 and PS417_05815 in Pseudomonas simiae WCS417

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_07150 permase 1.0 PS417_05815 recombinase RecA 0.25 15
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS07260 AI-2E family transporter 1.00 PFLU_RS05885 recombinase RecA low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS07260 AI-2E family transporter 1.00 PFLU_RS05885 recombinase RecA low > 109
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_3329 Putative permease PerM (= YfgO) 0.93 Pf1N1B4_3143 RecA protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_2750 Putative permease PerM (= YfgO) 0.93 Pf6N2E2_2993 RecA protein — —
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_04545 permease 0.93 AO356_05670 recombinase RecA low > 104
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_4510 Putative permease PerM (= YfgO) 0.92 PfGW456L13_4668 RecA protein low > 87
Pseudomonas sp. RS175 0.84 PFR28_00696 hypothetical protein 0.93 PFR28_00472 Protein RecA low > 88
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_1545 Protein of unknown function UPF0118 0.94 Psyr_1378 RecA protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_17655 permease 0.94 AO353_16805 recombinase RecA low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_1545 Protein of unknown function UPF0118 0.94 Psyr_1378 RecA protein low > 86
Pseudomonas putida KT2440 0.79 PP_1234 putative permease 0.87 PP_1629 Protein RecA low > 96
Pseudomonas stutzeri RCH2 0.72 Psest_1512 Predicted permease 0.87 Psest_2872 protein RecA low > 67
Marinobacter adhaerens HP15 0.51 HP15_2029 permease perM 0.80 HP15_1048 recombinase A low > 73
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_2441 Predicted permease 0.73 B158DRAFT_1531 protein RecA low > 40
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_10775 AI-2E family transporter 0.73 CSW01_02875 DNA recombination/repair protein RecA low > 62
Enterobacter asburiae PDN3 0.46 EX28DRAFT_0179 Predicted permease 0.71 EX28DRAFT_2785 protein RecA — —
Klebsiella michiganensis M5al 0.46 BWI76_RS20920 AI-2E family transporter 0.71 BWI76_RS22180 recombinase RecA — —
Enterobacter sp. TBS_079 0.46 MPMX20_03343 Putative transport protein YhhT 0.70 MPMX20_03580 Protein RecA low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_01233 Putative transport protein YhhT 0.71 OHPLBJKB_01035 Protein RecA low > 73
Escherichia coli ECOR27 0.45 NOLOHH_13490 perM Putative permease PerM 0.71 NOLOHH_12545 recA recombinase RecA — —
Escherichia coli ECRC102 0.45 NIAGMN_19610 perM Putative permease PerM 0.71 NIAGMN_18475 recA recombinase RecA — —
Escherichia coli ECRC101 0.45 MCAODC_12370 perM Putative permease PerM 0.71 MCAODC_11230 recA recombinase RecA — —
Escherichia coli BL21 0.45 ECD_02385 putative UPF0118 family inner membrane permease 0.71 ECD_02549 DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor low > 60
Escherichia coli ECRC101 0.45 OKFHMN_21840 perM Putative permease PerM 0.71 OKFHMN_20705 recA recombinase RecA — —
Escherichia fergusonii Becca 0.45 EFB2_01405 Putative transport protein YhhT 0.71 EFB2_01225 Protein RecA low > 86
Escherichia coli ECRC62 0.45 BNILDI_12300 perM Putative permease PerM 0.71 BNILDI_11105 recA recombinase RecA — —
Rahnella sp. WP5 0.45 EX31_RS22725 AI-2E family transporter 0.74 EX31_RS07800 recombinase RecA low > 89
Escherichia coli ECOR38 0.45 HEPCGN_21005 perM Putative permease PerM 0.71 HEPCGN_19900 recA recombinase RecA low > 85
Escherichia coli BW25113 0.45 b2493 yfgO predicted inner membrane protein (NCBI) 0.71 b2699 recA recombinase A (NCBI) low > 76
Escherichia coli ECRC98 0.45 JDDGAC_25785 perM Putative permease PerM 0.71 JDDGAC_24370 recA recombinase RecA — —
Escherichia coli Nissle 1917 0.45 ECOLIN_RS14160 AI-2E family transporter 0.71 ECOLIN_RS15060 recombinase RecA — —
Escherichia coli ECRC99 0.45 KEDOAH_06380 perM Putative permease PerM 0.71 KEDOAH_07430 recA recombinase RecA — —
Alteromonas macleodii MIT1002 0.45 MIT1002_02210 pheromone autoinducer 2 transporter 0.73 MIT1002_00955 Recombinase A low > 70
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF2176 Putative permease PerM (= YfgO) 0.71 GFF4693 RecA protein — —
Serratia liquefaciens MT49 0.44 IAI46_18795 AI-2E family transporter 0.71 IAI46_03840 recombinase RecA low > 86
Shewanella amazonensis SB2B 0.42 Sama_1911 hypothetical protein (RefSeq) 0.72 Sama_1046 recA recombinase A (RefSeq) low > 62
Shewanella loihica PV-4 0.41 Shew_1843 hypothetical protein (RefSeq) 0.69 Shew_1215 recA recombinase A (RefSeq) — —
Shewanella sp. ANA-3 0.40 Shewana3_1651 hypothetical protein (RefSeq) 0.70 Shewana3_1126 recA recombinase A (RefSeq) low > 73
Shewanella oneidensis MR-1 0.39 SO2867 permease PerM, putative (NCBI ptt file) 0.71 SO3430 recA recA protein (NCBI ptt file) low > 76

Not shown: 0 genomes with orthologs for PS417_07150 only; 61 genomes with orthologs for PS417_05815 only