Conservation of cofitness between EX31_RS21460 and EX31_RS07870 in Rahnella sp. WP5

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS21460 LysR family transcriptional regulator ArgP 1.0 EX31_RS07870 adenylyl-sulfate kinase 0.81 6
Serratia liquefaciens MT49 0.93 IAI46_20910 LysR family transcriptional regulator ArgP 0.81 IAI46_03725 adenylyl-sulfate kinase low > 86
Pantoea sp. MT58 0.92 IAI47_03715 LysR family transcriptional regulator ArgP 0.79 IAI47_04190 adenylyl-sulfate kinase 0.42 38
Pectobacterium carotovorum WPP14 0.92 HER17_RS02715 LysR family transcriptional regulator ArgP 0.78 HER17_RS04295 adenylyl-sulfate kinase low > 75
Dickeya dadantii 3937 0.91 DDA3937_RS18490 LysR family transcriptional regulator ArgP 0.78 DDA3937_RS16915 adenylyl-sulfate kinase 0.71 68
Dickeya dianthicola ME23 0.91 DZA65_RS19550 LysR family transcriptional regulator ArgP 0.78 DZA65_RS18060 adenylyl-sulfate kinase 0.48 68
Enterobacter sp. TBS_079 0.91 MPMX20_03773 HTH-type transcriptional regulator ArgP 0.76 MPMX20_03636 Adenylyl-sulfate kinase low > 85
Dickeya dianthicola 67-19 0.91 HGI48_RS18415 LysR family transcriptional regulator ArgP 0.76 HGI48_RS16985 adenylyl-sulfate kinase low > 71
Enterobacter asburiae PDN3 0.91 EX28DRAFT_2967 transcriptional regulator, ArgP family 0.75 EX28DRAFT_2846 adenylyl-sulfate kinase low > 76
Erwinia tracheiphila SCR3 0.91 LU632_RS05845 LysR family transcriptional regulator ArgP 0.73 LU632_RS06435 cysC adenylyl-sulfate kinase 0.55 23
Klebsiella michiganensis M5al 0.91 BWI76_RS23930 transcriptional regulator ArgP 0.77 BWI76_RS22690 adenylyl-sulfate kinase 0.31 71
Escherichia coli ECRC98 0.90 JDDGAC_23090 argP DNA-binding transcriptional regulator ArgP 0.75 JDDGAC_24115 cysC Adenylyl-sulfate kinase low > 86
Escherichia coli BW25113 0.90 b2916 argP chromosome replication initiation inhibitor protein (NCBI) 0.75 b2750 cysC adenylylsulfate kinase (NCBI) low > 76
Escherichia coli BL21 0.90 ECD_02747 transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor 0.75 ECD_02600 adenosine 5'-phosphosulfate kinase low > 61
Escherichia coli ECOR27 0.90 NOLOHH_11355 argP DNA-binding transcriptional regulator ArgP 0.75 NOLOHH_12265 cysC Adenylyl-sulfate kinase low > 75
Escherichia coli ECRC62 0.90 BNILDI_09890 argP DNA-binding transcriptional regulator ArgP 0.75 BNILDI_10815 cysC Adenylyl-sulfate kinase low > 75
Escherichia coli ECRC99 0.90 KEDOAH_08690 argP DNA-binding transcriptional regulator ArgP 0.75 KEDOAH_07690 cysC Adenylyl-sulfate kinase — —
Escherichia coli Nissle 1917 0.90 ECOLIN_RS16225 DNA-binding transcriptional regulator ArgP 0.75 ECOLIN_RS15375 adenylyl-sulfate kinase — —
Escherichia coli ECRC100 0.90 OKFHMN_19450 argP DNA-binding transcriptional regulator ArgP 0.75 OKFHMN_20450 cysC Adenylyl-sulfate kinase low > 80
Escherichia coli ECRC101 0.90 MCAODC_09970 argP DNA-binding transcriptional regulator ArgP 0.75 MCAODC_10975 cysC Adenylyl-sulfate kinase low > 87
Escherichia coli ECOR38 0.90 HEPCGN_18750 argP DNA-binding transcriptional regulator ArgP 0.75 HEPCGN_19630 cysC Adenylyl-sulfate kinase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF3015 Chromosome initiation inhibitor 0.73 GFF4798 Adenylylsulfate kinase (EC 2.7.1.25) 0.32 65
Escherichia coli ECRC102 0.90 NIAGMN_17215 argP DNA-binding transcriptional regulator ArgP 0.75 NIAGMN_18220 cysC Adenylyl-sulfate kinase — —
Escherichia fergusonii Becca 0.90 EFB2_00987 HTH-type transcriptional regulator ArgP 0.75 EFB2_01160 Adenylyl-sulfate kinase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_00800 HTH-type transcriptional regulator ArgP 0.75 OHPLBJKB_00983 Adenylyl-sulfate kinase low > 73
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_02560 chromosome initiation inhibitor 0.64 CSW01_12950 adenylyl-sulfate kinase low > 62
Shewanella amazonensis SB2B 0.39 Sama_2987 chromosome replication initiation inhibitor protein (RefSeq) 0.59 Sama_2888 adenylylsulfate kinase (RefSeq) low > 62
Shewanella loihica PV-4 0.34 Shew_1844 chromosome replication initiation inhibitor protein (RefSeq) 0.61 Shew_1425 adenylyl-sulfate kinase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.33 SO2866 iciA chromosome initiation inhibitor (NCBI ptt file) 0.54 SO3723 cysC adenylylsulfate kinase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.33 Shewana3_1652 chromosome replication initiation inhibitor protein (RefSeq) 0.57 Shewana3_0866 adenylylsulfate kinase (RefSeq) low > 73
Pseudomonas sp. RS175 0.30 PFR28_00608 HTH-type transcriptional regulator ArgP 0.44 PFR28_05082 Adenylyl-sulfate kinase low > 88
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_708 Chromosome initiation inhibitor 0.50 Pf1N1B4_334 Adenylylsulfate kinase (EC 2.7.1.25) — —
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_04995 LysR family transcriptional regulator 0.46 AO356_08855 adenylylsulfate kinase low > 104
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU0594 iciA chromosome initiation inhibitor (TIGR) 0.46 DVUA0079 cysC adenylylsulfate kinase (TIGR) low > 55
Pseudomonas simiae WCS417 0.30 PS417_22165 LysR family transcriptional regulator 0.49 PS417_20630 adenylylsulfate kinase — —
Pseudomonas fluorescens SBW25 0.29 PFLU_RS23790 LysR family transcriptional regulator ArgP 0.45 PFLU_RS10330 adenylyl-sulfate kinase low > 109
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS23790 LysR family transcriptional regulator ArgP 0.45 PFLU_RS10330 adenylyl-sulfate kinase low > 109
Pseudomonas sp. S08-1 0.29 OH686_07195 Transcriptional regulator ArgP, LysR family 0.48 OH686_14415 Adenylylsulfate kinase low > 80
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS18360 transcriptional regulator ArgP 0.37 RALBFv3_RS22610 adenylyl-sulfate kinase low > 76
Ralstonia solanacearum UW163 0.27 UW163_RS20770 transcriptional regulator ArgP 0.37 UW163_RS23160 adenylyl-sulfate kinase — —
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS23610 LysR family transcriptional regulator ArgP 0.43 QEN71_RS25815 adenylyl-sulfate kinase low > 153
Alteromonas macleodii MIT1002 0.25 MIT1002_00129 OriC replication inhibitor 0.58 MIT1002_01273 Adenylyl-sulfate kinase — —
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_04882 transcriptional regulator, LysR family 0.43 H281DRAFT_04809 adenylylsulfate kinase — —
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS31465 LysR family transcriptional regulator 0.37 RR42_RS33540 adenylylsulfate kinase low > 128

Not shown: 27 genomes with orthologs for EX31_RS21460 only; 9 genomes with orthologs for EX31_RS07870 only