Conservation of cofitness between EX28DRAFT_3857 and EX28DRAFT_3331 in Enterobacter asburiae PDN3

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_3857 tRNA (cytidine(34)-2'-O)-methyltransferase 1.0 EX28DRAFT_3331 Putative threonine efflux protein 0.58 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF408 'tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)' transl_table=11 0.16 GFF2102 Transporter, LysE family low > 78
Escherichia coli BL21 0.94 ECD_03464 tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent 0.16 ECD_02472 cysteine and O-acetylserine exporter low > 61
Serratia liquefaciens MT49 0.87 IAI46_24670 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL 0.23 IAI46_23555 LysE family translocator low > 86
Erwinia tracheiphila SCR3 0.84 LU632_RS21865 trmL tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL 0.20 LU632_RS22775 LysE family translocator low > 74
Rahnella sp. WP5 0.84 EX31_RS14330 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL 0.24 EX31_RS05815 LysE family translocator low > 89
Pseudomonas sp. S08-1 0.65 OH686_14675 tRNA (cytidine(34)-2'-O)-methyltransferase 0.36 OH686_05705 Transporter, LysE family
Shewanella oneidensis MR-1 0.63 SO4529 RNA methyltransferase, TrmH family, group 2 (NCBI ptt file) 0.27 SO1716 transporter, LysE family (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.63 Sama_3440 RNA methyltransferase TrmH, group 2 (RefSeq) 0.21 Sama_2015 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.63 Shewana3_3934 RNA methyltransferase (RefSeq) 0.27 Shewana3_2742 lysine exporter protein LysE/YggA (RefSeq) low > 73
Rhodanobacter denitrificans FW104-10B01 0.63 LRK54_RS10645 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL 0.17 LRK54_RS14635 LysE family translocator low > 59
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_09750 rRNA methylase 0.43 AO356_26140 lysine transporter LysE low > 104
Pseudomonas putida KT2440 0.62 PP_5052 tRNA(Leu) mC34,mU34 2'-O-ribose methyltransferase, AdoMet-dependent 0.28 PP_2429 putative Membrane protein low > 96
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_1613 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) 0.23 Pf1N1B4_193 Transporter, LysE family low > 87
Rhodanobacter denitrificans MT42 0.62 LRK55_RS10285 tRNA (cytidine(34)-2'-O)-methyltransferase 0.17 LRK55_RS14350 LysE family translocator low > 63
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_12135 rRNA methylase 0.23 AO353_01100 lysine transporter LysE low > 101
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS01475 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL 0.25 QEN71_RS18185 LysE family translocator low > 153
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS02620 tRNA methyltransferase 0.25 BPHYT_RS21565 lysine transporter LysE low > 109
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_01998 tRNA (cytidine/uridine-2'-O-)-methyltransferase 0.25 H281DRAFT_01576 Threonine/homoserine/homoserine lactone efflux protein low > 103
Pseudomonas sp. RS175 0.61 PFR28_04942 'tRNA (cytidine(34)-2'-O)-methyltransferase' transl_table=11 0.40 PFR28_01845 Cysteine/O-acetylserine efflux protein low > 88
Pseudomonas simiae WCS417 0.61 PS417_01625 rRNA methylase 0.26 PS417_14335 lysine transporter LysE
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_3828 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) 0.42 Pf6N2E2_1101 Transporter, LysE family low > 103
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS01675 tRNA (cytidine(34)-2'-O)-methyltransferase 0.46 PFLU_RS13265 LysE family translocator low > 109
Pseudomonas fluorescens SBW25 0.60 PFLU_RS01675 tRNA (cytidine(34)-2'-O)-methyltransferase 0.46 PFLU_RS13265 LysE family translocator low > 109
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS01855 rRNA methylase 0.24 RR42_RS17900 lysine transporter LysE low > 128
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_4881 RNA methyltransferase TrmH, group 2 0.28 Psyr_3234 Lysine exporter protein (LYSE/YGGA) low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_4881 RNA methyltransferase TrmH, group 2 0.28 Psyr_3234 Lysine exporter protein (LYSE/YGGA) low > 86
Dickeya dianthicola ME23 0.56 DZA65_RS21630 tRNA (cytidine(34)-2'-O)-methyltransferase 0.27 DZA65_RS07375 LysE family translocator low > 75
Shewanella loihica PV-4 0.56 Shew_3577 RNA methyltransferase (RefSeq) 0.25 Shew_1684 lysine exporter protein LysE/YggA (RefSeq) low > 60
Dickeya dianthicola 67-19 0.56 HGI48_RS20615 tRNA (cytidine(34)-2'-O)-methyltransferase 0.21 HGI48_RS19540 LysE family translocator low > 71
Dickeya dadantii 3937 0.56 DDA3937_RS00755 tRNA (cytidine(34)-2'-O)-methyltransferase 0.21 DDA3937_RS19420 LysE family translocator low > 74
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS20815 tRNA methyltransferase 0.24 HSERO_RS09035 lysine transporter LysE low > 78
Pectobacterium carotovorum WPP14 0.55 HER17_RS00645 tRNA (cytidine(34)-2'-O)-methyltransferase 0.85 HER17_RS18860 LysE family translocator low > 75

Not shown: 55 genomes with orthologs for EX28DRAFT_3857 only; 2 genomes with orthologs for EX28DRAFT_3331 only