Conservation of cofitness between ECD_01018 and ECD_04046 in Escherichia coli BL21

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01018 proline:sodium symporter 1.0 ECD_04046 exoribonuclease R, RNase R 0.42 9
Escherichia coli ECRC62 1.00 BNILDI_19660 putP sodium/proline symporter PutP 1.00 BNILDI_07005 rnr ribonuclease R low > 75
Escherichia coli ECRC101 1.00 MCAODC_23980 putP sodium/proline symporter PutP 1.00 MCAODC_02735 rnr ribonuclease R low > 87
Escherichia coli ECRC100 1.00 OKFHMN_04595 putP sodium/proline symporter PutP 0.99 OKFHMN_12220 rnr ribonuclease R low > 80
Escherichia coli BW25113 1.00 b1015 putP proline:sodium symporter (NCBI) 1.00 b4179 vacB putative enzyme (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02651 Sodium/proline symporter 1.00 OHPLBJKB_03863 Ribonuclease R low > 73
Escherichia coli ECRC99 1.00 KEDOAH_23150 putP sodium/proline symporter PutP 1.00 KEDOAH_15935 rnr ribonuclease R — —
Escherichia coli ECOR27 1.00 NOLOHH_21495 putP sodium/proline symporter PutP 1.00 NOLOHH_04485 rnr ribonuclease R low > 75
Escherichia coli ECRC102 1.00 NIAGMN_23740 putP sodium/proline symporter PutP 1.00 NIAGMN_10070 rnr ribonuclease R — —
Escherichia coli ECRC98 1.00 JDDGAC_08205 putP sodium/proline symporter PutP 1.00 JDDGAC_15860 rnr ribonuclease R low > 86
Escherichia coli ECOR38 1.00 HEPCGN_23540 putP sodium/proline symporter PutP 1.00 HEPCGN_10450 rnr ribonuclease R 0.55 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS05300 sodium/proline symporter PutP 0.99 ECOLIN_RS24265 ribonuclease R low > 55
Escherichia fergusonii Becca 1.00 EFB2_03065 Sodium/proline symporter 0.99 EFB2_04356 Ribonuclease R low > 86
Klebsiella michiganensis M5al 0.96 BWI76_RS10800 sodium:proline symporter 0.91 BWI76_RS02575 exoribonuclease R low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF3303 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 0.93 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_1910 sodium/proline symporter 0.91 EX28DRAFT_3376 ribonuclease R low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_01703 Sodium/proline symporter 0.90 MPMX20_00460 Ribonuclease R low > 85
Pantoea sp. MT58 0.84 IAI47_08205 sodium/proline symporter PutP 0.78 IAI47_02625 ribonuclease R low > 76
Serratia liquefaciens MT49 0.81 IAI46_15740 sodium/proline symporter PutP 0.76 IAI46_01660 ribonuclease R low > 86
Dickeya dianthicola 67-19 0.80 HGI48_RS20260 sodium/proline symporter PutP 0.75 HGI48_RS17315 ribonuclease R low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS21305 sodium/proline symporter PutP 0.75 DZA65_RS18405 ribonuclease R low > 75
Dickeya dadantii 3937 0.80 DDA3937_RS20120 sodium/proline symporter PutP 0.76 DDA3937_RS17260 ribonuclease R low > 74
Rahnella sp. WP5 0.80 EX31_RS09415 sodium/proline symporter PutP 0.77 EX31_RS08785 ribonuclease R low > 89
Erwinia tracheiphila SCR3 0.80 LU632_RS13735 putP sodium/proline symporter PutP 0.79 LU632_RS21750 rnr ribonuclease R low > 74
Pectobacterium carotovorum WPP14 0.79 HER17_RS01105 sodium/proline symporter PutP 0.76 HER17_RS03835 ribonuclease R low > 75
Pseudomonas putida KT2440 0.76 PP_4946 sodium/L-proline transporter 0.48 PP_4880 exoribonuclease R low > 96
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_221 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 0.49 PfGW456L13_144 3'-to-5' exoribonuclease RNase R low > 87
Pseudomonas simiae WCS417 0.76 PS417_02180 proline:sodium symporter PutP 0.49 PS417_02555 exoribonuclease R low > 88
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS02235 sodium/proline symporter PutP 0.49 PFLU_RS02625 ribonuclease R low > 109
Pseudomonas fluorescens SBW25 0.75 PFLU_RS02235 sodium/proline symporter PutP 0.49 PFLU_RS02625 ribonuclease R low > 109
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_1487 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 0.49 Pf1N1B4_1403 3'-to-5' exoribonuclease RNase R low > 87
Pseudomonas stutzeri RCH2 0.75 Psest_3075 sodium/proline symporter 0.49 Psest_0691 ribonuclease R low > 67
Pseudomonas sp. S08-1 0.74 OH686_03775 sodium/proline symporter 0.49 OH686_15910 ribonuclease R low > 80
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0507 Na+/solute symporter 0.49 Psyr_0579 RNAse R low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0507 Na+/solute symporter 0.49 Psyr_0579 RNAse R low > 86
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_12815 proline:sodium symporter PutP 0.49 AO353_13200 exoribonuclease R low > 101
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_09010 proline:sodium symporter PutP 0.50 AO356_08610 exoribonuclease R low > 104
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_3684 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 0.50 Pf6N2E2_3607 3'-to-5' exoribonuclease RNase R low > 103
Pseudomonas sp. RS175 0.73 PFR28_05054 Sodium/proline symporter 0.49 PFR28_05130 Ribonuclease R low > 88
Acinetobacter radioresistens SK82 0.66 MPMX26_01468 Sodium/proline symporter 0.36 MPMX26_02684 Ribonuclease R low > 36
Shewanella loihica PV-4 0.50 Shew_2435 sodium/proline symporter (RefSeq) 0.57 Shew_3289 ribonuclease R (RefSeq) low > 60
Shewanella amazonensis SB2B 0.50 Sama_2177 sodium/proline symporter (RefSeq) 0.53 Sama_3067 exoribonuclease II (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_2252 sodium/proline symporter 0.51 B158DRAFT_1989 ribonuclease R low > 40
Shewanella sp. ANA-3 0.49 Shewana3_1451 sodium/proline symporter (RefSeq) 0.56 Shewana3_0697 RNAse R (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.47 MIT1002_01275 Proline permease 0.54 MIT1002_03606 Ribonuclease R low > 70
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_19440 sodium/proline symporter PutP 0.63 CSW01_13155 ribonuclease R low > 62
Marinobacter adhaerens HP15 0.39 HP15_2205 sodium/solute symporter 0.45 HP15_622 exoribonuclease R low > 73

Not shown: 4 genomes with orthologs for ECD_01018 only; 38 genomes with orthologs for ECD_04046 only