Conservation of cofitness between ECD_00289 and ECD_03302 in Escherichia coli BL21

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00289 propionate--CoA ligase 1.0 ECD_03302 sn-glycerol-3-phosphate ABC transporter periplasmic binding protein 0.41 35
Escherichia coli ECRC102 1.00 NIAGMN_06940 prpE propionate--CoA ligase 1.00 NIAGMN_14540 ugpB sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB — —
Escherichia coli ECRC100 1.00 OKFHMN_08885 prpE propionate--CoA ligase 1.00 OKFHMN_16770 ugpB sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 80
Escherichia coli ECRC101 1.00 MCAODC_28115 prpE propionate--CoA ligase 1.00 MCAODC_07300 ugpB sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 87
Escherichia coli BW25113 1.00 b0335 prpE predicted propionyl-CoA synthetase with ATPase domain (NCBI) 1.00 b3453 ugpB glycerol-3-phosphate transporter subunit (NCBI) low > 76
Escherichia coli ECRC98 1.00 JDDGAC_12540 prpE propionate--CoA ligase 1.00 JDDGAC_20400 ugpB sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03336 Acetyl-coenzyme A synthetase 1.00 OHPLBJKB_00250 sn-glycerol-3-phosphate-binding periplasmic protein UgpB low > 73
Escherichia coli ECRC99 0.99 KEDOAH_19080 prpE propionate--CoA ligase 1.00 KEDOAH_11370 ugpB sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB — —
Escherichia coli ECOR27 0.99 NOLOHH_01760 prpE propionate--CoA ligase 1.00 NOLOHH_08560 ugpB sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 75
Escherichia coli ECRC62 0.99 BNILDI_23175 prpE propionate--CoA ligase 1.00 BNILDI_02945 ugpB sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 75
Escherichia coli ECOR38 0.99 HEPCGN_07470 prpE propionate--CoA ligase 0.99 HEPCGN_15590 ugpB sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS02165 propionate--CoA ligase 0.99 ECOLIN_RS19745 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 55
Escherichia fergusonii Becca 0.99 EFB2_03703 Acetyl-coenzyme A synthetase 0.99 EFB2_00369 sn-glycerol-3-phosphate-binding periplasmic protein UgpB low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF4266 Propionate--CoA ligase (EC 6.2.1.17) 0.92 GFF555 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) low > 78
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS15645 acetyl-CoA synthetase 0.56 HSERO_RS18955 glycerol-3-phosphate ABC transporter substrate-binding protein low > 78
Ralstonia solanacearum PSI07 0.64 RPSI07_RS15240 propionate--CoA ligase 0.58 RPSI07_RS17800 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 81
Acidovorax sp. GW101-3H11 0.64 Ac3H11_2208 Propionate--CoA ligase (EC 6.2.1.17) 0.49 Ac3H11_4788 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF4880 Propionate--CoA ligase (EC 6.2.1.17) 0.51 GFF1259 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) low > 90
Ralstonia solanacearum GMI1000 0.64 RS_RS07615 propionate--CoA ligase 0.58 RS_RS06335 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 80
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS02205 propionate--CoA ligase 0.58 RALBFv3_RS15555 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 76
Ralstonia solanacearum UW163 0.64 UW163_RS15515 propionate--CoA ligase 0.58 UW163_RS13015 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB — —
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS14155 propionate--CoA ligase 0.59 ABZR87_RS11085 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 80
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS13560 propionyl-CoA synthetase 0.60 RR42_RS12970 glycerol-3-phosphate ABC transporter substrate-binding protein low > 128
Variovorax sp. SCN45 0.63 GFF978 Propionate--CoA ligase (EC 6.2.1.17) 0.52 GFF2537 Glycerol-3-phosphate ABC transporter, substrate-binding protein UgpB 0.54 124
Dechlorosoma suillum PS 0.62 Dsui_2925 propionate--CoA ligase 0.25 Dsui_3367 ABC-type sugar transport system, periplasmic component 0.55 9
Variovorax sp. OAS795 0.62 ABID97_RS14140 propionate--CoA ligase 0.51 ABID97_RS07230 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 91
Castellaniella sp019104865 MT123 0.62 ABCV34_RS00670 propionate--CoA ligase 0.49 ABCV34_RS03605 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 48
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS05120 propionate--CoA ligase 0.70 QEN71_RS27605 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 153
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS13830 acetyl-CoA synthetase 0.70 BPHYT_RS17455 glycerol-3-phosphate ABC transporter substrate-binding protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_04471 propionyl-CoA synthetase 0.70 H281DRAFT_05704 glycerol 3-phosphate-binding protein low > 103
Rhodopseudomonas palustris CGA009 0.41 TX73_023385 propionyl-CoA synthetase 0.49 TX73_024885 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 86
Azospirillum sp. SherDot2 0.41 MPMX19_01753 Acetyl-coenzyme A synthetase 0.44 MPMX19_00483 sn-glycerol-3-phosphate-binding periplasmic protein UgpB low > 112
Phaeobacter inhibens DSM 17395 0.40 PGA1_c11900 Propionate--CoA ligase (EC 6.2.1.17) (from data) 0.30 PGA1_c02710 sn-glycerol-3-phosphate-binding periplasmic protein ugpB low > 62
Azospirillum brasilense Sp245 0.40 AZOBR_RS06340 acyl-CoA synthetase 0.44 AZOBR_RS00075 glycerol-3-phosphate ABC transporter substrate-binding protein low > 97
Rhizobium sp. OAE497 0.40 ABIE40_RS19175 propionyl-CoA synthetase 0.45 ABIE40_RS01380 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 107
Dinoroseobacter shibae DFL-12 0.39 Dshi_0825 AMP-dependent synthetase and ligase (RefSeq) 0.49 Dshi_2014 extracellular solute-binding protein family 1 (RefSeq) low > 64
Bosea sp. OAE506 0.39 ABIE41_RS09315 propionyl-CoA synthetase 0.47 ABIE41_RS03450 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB low > 77
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_06755 acetate--CoA ligase 0.36 CSW01_07785 ABC transporter substrate-binding protein low > 62
Sinorhizobium meliloti 1021 0.39 SMc04095 acyl-COA synthetase 0.44 SM_b20416 glycerol-3-phosphate ABC transporter substrate-binding protein low > 103

Not shown: 14 genomes with orthologs for ECD_00289 only; 17 genomes with orthologs for ECD_03302 only