Conservation of cofitness between ECD_03886 and ECD_02836 in Escherichia coli BL21

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03886 malate synthase A 1.0 ECD_02836 putative type II secretion protein GspF 0.58 26
Escherichia coli ECRC101 0.99 MCAODC_03770 aceB malate synthase A 0.52 MCAODC_15275 gspF type II secretion system inner membrane protein GspF low > 87
Escherichia coli ECRC102 0.99 NIAGMN_11020 aceB malate synthase A 0.52 NIAGMN_28595 gspF type II secretion system inner membrane protein GspF — —
Escherichia coli ECRC98 0.99 JDDGAC_16895 aceB malate synthase A 0.52 JDDGAC_30305 gspF type II secretion system inner membrane protein GspF low > 86
Escherichia coli ECRC100 0.99 OKFHMN_13270 aceB malate synthase A 0.52 OKFHMN_00275 gspF type II secretion system inner membrane protein GspF low > 80
Escherichia coli ECOR27 0.99 NOLOHH_05415 aceB malate synthase A 0.99 NOLOHH_10985 gspF general secretion pathway protein F low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04036 Malate synthase A 0.98 OHPLBJKB_00741 Type II secretion system protein F low > 73
Escherichia coli ECOR38 0.99 HEPCGN_11910 aceB malate synthase A 0.99 HEPCGN_18060 gspF general secretion pathway protein F low > 87
Escherichia fergusonii Becca 0.99 EFB2_04596 Malate synthase A 1.00 EFB2_00847 Type II secretion system protein F low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS25510 malate synthase A 0.99 ECOLIN_RS17075 type II secretion system inner membrane protein GspF — —
Klebsiella michiganensis M5al 0.92 BWI76_RS01660 malate synthase A 0.53 BWI76_RS05080 type II secretion protein F low > 92
Pectobacterium carotovorum WPP14 0.82 HER17_RS02290 malate synthase A 0.51 HER17_RS06695 type II secretion system inner membrane protein GspF low > 75
Dickeya dadantii 3937 0.82 DDA3937_RS19060 malate synthase A 0.53 DDA3937_RS14790 type II secretion system inner membrane protein GspF low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS19150 malate synthase A 0.53 HGI48_RS14725 type II secretion system inner membrane protein GspF low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS20270 malate synthase A 0.53 DZA65_RS15670 type II secretion system inner membrane protein GspF low > 75
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_03825 malate synthase A 0.56 CSW01_13780 type II secretion system protein GspF — —
Shewanella sp. ANA-3 0.68 Shewana3_2943 malate synthase (RefSeq) 0.54 Shewana3_0153 general secretion pathway protein F (RefSeq) low > 73
Shewanella amazonensis SB2B 0.68 Sama_2381 malate synthase (RefSeq) 0.53 Sama_0171 general secretion pathway protein F (RefSeq) low > 62
Shewanella oneidensis MR-1 0.67 SO1483 aceB Malate synthase (EC 2.3.3.9) (from data) 0.52 SO0168 gspF general secretion pathway protein F (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.67 Shew_1275 malate synthase (RefSeq) 0.54 Shew_3617 general secretion pathway protein F (RefSeq) low > 60
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_01843 malate synthase 0.31 CCNA_00174 type II secretion pathway protein F low > 67
Caulobacter crescentus NA1000 0.50 CCNA_01843 malate synthase 0.31 CCNA_00174 type II secretion pathway protein F low > 66
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.310.1 Malate synthase (EC 2.3.3.9) 0.34 Xcc-8004.944.1 General secretion pathway protein F low > 74
Lysobacter sp. OAE881 0.46 ABIE51_RS00195 malate synthase A 0.26 ABIE51_RS04810 type II secretion system F family protein low > 62
Paraburkholderia graminis OAS925 0.45 ABIE53_002540 malate synthase 0.35 ABIE53_000298 general secretion pathway protein F low > 113
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS12305 Malate synthase (EC 2.3.3.9) (from data) 0.37 BPHYT_RS19605 general secretion pathway protein F low > 109
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_00576 malate synthase 0.35 H281DRAFT_02354 general secretion pathway protein F low > 103
Ralstonia solanacearum PSI07 0.45 RPSI07_RS17310 malate synthase A 0.34 RPSI07_RS09505 type II secretion system protein GspF low > 81
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS00170 malate synthase A 0.34 RALBFv3_RS07755 type II secretion system protein GspF 0.59 15
Ralstonia solanacearum UW163 0.45 UW163_RS13500 malate synthase A 0.34 UW163_RS05870 type II secretion system protein GspF — —
Ralstonia solanacearum GMI1000 0.44 RS_RS06835 malate synthase A 0.34 RS_RS15650 type II secretion system protein GspF low > 80
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS06250 malate synthase A 0.35 QEN71_RS29520 type II secretion system inner membrane protein GspF low > 153
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS11625 malate synthase A 0.35 ABZR87_RS03460 type II secretion system inner membrane protein GspF low > 80
Dechlorosoma suillum PS 0.44 Dsui_0019 malate synthase A 0.27 Dsui_1319 type II secretory pathway, component PulF low > 51

Not shown: 19 genomes with orthologs for ECD_03886 only; 25 genomes with orthologs for ECD_02836 only