Conservation of cofitness between ECD_01018 and ECD_02758 in Escherichia coli BL21

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01018 proline:sodium symporter 1.0 ECD_02758 D-erythrose 4-phosphate dehydrogenase 0.47 2
Escherichia coli ECRC62 1.00 BNILDI_19660 putP sodium/proline symporter PutP 1.00 BNILDI_09835 epd erythrose-4-phosphate dehydrogenase low > 75
Escherichia coli ECOR27 1.00 NOLOHH_21495 putP sodium/proline symporter PutP 1.00 NOLOHH_11295 epd erythrose-4-phosphate dehydrogenase low > 75
Escherichia coli ECRC100 1.00 OKFHMN_04595 putP sodium/proline symporter PutP 1.00 OKFHMN_19385 epd erythrose-4-phosphate dehydrogenase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02651 Sodium/proline symporter 1.00 OHPLBJKB_00789 D-erythrose-4-phosphate dehydrogenase low > 73
Escherichia coli ECRC98 1.00 JDDGAC_08205 putP sodium/proline symporter PutP 1.00 JDDGAC_23015 epd erythrose-4-phosphate dehydrogenase low > 86
Escherichia coli BW25113 1.00 b1015 putP proline:sodium symporter (NCBI) 1.00 b2927 epd D-erythrose 4-phosphate dehydrogenase (NCBI) low > 76
Escherichia coli ECRC102 1.00 NIAGMN_23740 putP sodium/proline symporter PutP 1.00 NIAGMN_17150 epd erythrose-4-phosphate dehydrogenase — —
Escherichia coli ECRC99 1.00 KEDOAH_23150 putP sodium/proline symporter PutP 1.00 KEDOAH_08755 epd erythrose-4-phosphate dehydrogenase — —
Escherichia coli ECRC101 1.00 MCAODC_23980 putP sodium/proline symporter PutP 1.00 MCAODC_09905 epd erythrose-4-phosphate dehydrogenase low > 87
Escherichia coli ECOR38 1.00 HEPCGN_23540 putP sodium/proline symporter PutP 1.00 HEPCGN_18695 epd erythrose-4-phosphate dehydrogenase 0.62 24
Escherichia coli Nissle 1917 1.00 ECOLIN_RS05300 sodium/proline symporter PutP 1.00 ECOLIN_RS16265 erythrose-4-phosphate dehydrogenase low > 55
Escherichia fergusonii Becca 1.00 EFB2_03065 Sodium/proline symporter 1.00 EFB2_00979 D-erythrose-4-phosphate dehydrogenase low > 86
Klebsiella michiganensis M5al 0.96 BWI76_RS10800 sodium:proline symporter 0.92 BWI76_RS23985 erythrose-4-phosphate dehydrogenase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF3303 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 0.95 GFF3022 D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_1910 sodium/proline symporter 0.95 EX28DRAFT_2973 erythrose-4-phosphate dehydrogenase 0.64 3
Enterobacter sp. TBS_079 0.92 MPMX20_01703 Sodium/proline symporter 0.96 MPMX20_03779 D-erythrose-4-phosphate dehydrogenase low > 85
Pantoea sp. MT58 0.84 IAI47_08205 sodium/proline symporter PutP 0.85 IAI47_03685 erythrose-4-phosphate dehydrogenase low > 76
Serratia liquefaciens MT49 0.81 IAI46_15740 sodium/proline symporter PutP 0.82 IAI46_21015 erythrose-4-phosphate dehydrogenase low > 86
Dickeya dianthicola 67-19 0.80 HGI48_RS20260 sodium/proline symporter PutP 0.82 HGI48_RS18445 erythrose-4-phosphate dehydrogenase low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS21305 sodium/proline symporter PutP 0.82 DZA65_RS19580 erythrose-4-phosphate dehydrogenase low > 75
Dickeya dadantii 3937 0.80 DDA3937_RS20120 sodium/proline symporter PutP 0.82 DDA3937_RS18520 erythrose-4-phosphate dehydrogenase low > 74
Rahnella sp. WP5 0.80 EX31_RS09415 sodium/proline symporter PutP 0.81 EX31_RS21405 erythrose-4-phosphate dehydrogenase low > 89
Erwinia tracheiphila SCR3 0.80 LU632_RS13735 putP sodium/proline symporter PutP 0.83 LU632_RS05535 epd erythrose-4-phosphate dehydrogenase low > 74
Pectobacterium carotovorum WPP14 0.79 HER17_RS01105 sodium/proline symporter PutP 0.85 HER17_RS02685 erythrose-4-phosphate dehydrogenase low > 75
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_221 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 0.53 PfGW456L13_1065 D-erythrose-4-phosphate dehydrogenase — —
Pseudomonas putida KT2440 0.76 PP_4946 sodium/L-proline transporter 0.53 PP_4964 D-erythrose 4-phosphate dehydrogenase low > 96
Pseudomonas simiae WCS417 0.76 PS417_02180 proline:sodium symporter PutP 0.52 PS417_26435 glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas fluorescens SBW25 0.75 PFLU_RS02235 sodium/proline symporter PutP 0.52 PFLU_RS28090 erythrose-4-phosphate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS02235 sodium/proline symporter PutP 0.52 PFLU_RS28090 erythrose-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_1487 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 0.53 Pf1N1B4_2398 D-erythrose-4-phosphate dehydrogenase — —
Pseudomonas stutzeri RCH2 0.75 Psest_3075 sodium/proline symporter 0.52 Psest_0329 erythrose-4-phosphate dehydrogenase — —
Pseudomonas sp. S08-1 0.74 OH686_03775 sodium/proline symporter 0.53 OH686_10765 erythrose-4-phosphate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0507 Na+/solute symporter 0.52 Psyr_4791 D-erythrose-4-phosphate dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0507 Na+/solute symporter 0.52 Psyr_4791 D-erythrose-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_12815 proline:sodium symporter PutP 0.52 AO353_07950 glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_09010 proline:sodium symporter PutP 0.54 AO356_13685 glyceraldehyde-3-phosphate dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_3684 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 0.53 Pf6N2E2_4656 D-erythrose-4-phosphate dehydrogenase — —
Pseudomonas sp. RS175 0.73 PFR28_05054 Sodium/proline symporter 0.54 PFR28_04187 D-erythrose-4-phosphate dehydrogenase — —
Acinetobacter radioresistens SK82 0.66 MPMX26_01468 Sodium/proline symporter 0.45 MPMX26_01087 D-erythrose-4-phosphate dehydrogenase low > 36
Shewanella loihica PV-4 0.50 Shew_2435 sodium/proline symporter (RefSeq) 0.66 Shew_0753 erythrose 4-phosphate dehydrogenase (RefSeq) — —
Shewanella amazonensis SB2B 0.50 Sama_2177 sodium/proline symporter (RefSeq) 0.64 Sama_2758 erythrose 4-phosphate dehydrogenase (RefSeq) low > 62
Shewanella sp. ANA-3 0.49 Shewana3_1451 sodium/proline symporter (RefSeq) 0.67 Shewana3_3352 erythrose 4-phosphate dehydrogenase (RefSeq) low > 73
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_2252 sodium/proline symporter 0.49 B158DRAFT_0511 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (EC 1.2.1.12) — —
Alteromonas macleodii MIT1002 0.47 MIT1002_01275 Proline permease 0.67 MIT1002_00862 D-erythrose-4-phosphate dehydrogenase — —
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_19440 sodium/proline symporter PutP 0.71 CSW01_02530 D-erythrose-4-phosphate dehydrogenase low > 62
Marinobacter adhaerens HP15 0.39 HP15_2205 sodium/solute symporter 0.54 HP15_2912 glyceraldehyde 3-phosphate dehydrogenase, type I — —

Not shown: 4 genomes with orthologs for ECD_01018 only; 19 genomes with orthologs for ECD_02758 only