Conservation of cofitness between ECD_00419 and ECD_02289 in Escherichia coli BL21

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00419 DUF454 family inner membrane protein 1.0 ECD_02289 glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase 0.53 14
Escherichia coli ECRC99 1.00 KEDOAH_19790 ybaN DUF454 domain-containing protein 1.00 KEDOAH_05850 alaC alanine transaminase — —
Escherichia coli ECOR38 1.00 HEPCGN_06790 ybaN DUF454 domain-containing protein 1.00 HEPCGN_21580 alaC alanine transaminase low > 87
Escherichia coli ECRC98 1.00 JDDGAC_11825 ybaN DUF454 domain-containing protein 1.00 JDDGAC_26335 alaC alanine transaminase low > 86
Escherichia coli ECOR27 1.00 NOLOHH_01105 ybaN DUF454 domain-containing protein 1.00 NOLOHH_14055 alaC alanine transaminase low > 75
Escherichia coli ECRC62 1.00 BNILDI_22525 ybaN DUF454 domain-containing protein 1.00 BNILDI_12910 alaC alanine transaminase low > 75
Escherichia coli ECRC100 1.00 OKFHMN_08175 ybaN DUF454 domain-containing protein 1.00 OKFHMN_22370 alaC alanine transaminase low > 80
Escherichia coli BW25113 1.00 b0468 ybaN conserved inner membrane protein (NCBI) 1.00 b2379 yfdZ hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03206 Inner membrane protein YbaN 1.00 OHPLBJKB_01342 Glutamate-pyruvate aminotransferase AlaC 0.35 50
Escherichia coli ECRC102 1.00 NIAGMN_06230 ybaN DUF454 domain-containing protein 1.00 NIAGMN_20145 alaC alanine transaminase — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS02785 DUF454 family protein 1.00 ECOLIN_RS13690 alanine transaminase — —
Escherichia fergusonii Becca 0.99 EFB2_03590 Inner membrane protein YbaN 1.00 EFB2_01495 Glutamate-pyruvate aminotransferase AlaC low > 86
Escherichia coli ECRC101 0.99 MCAODC_27400 ybaN DUF454 domain-containing protein 1.00 MCAODC_12900 alaC alanine transaminase low > 87
Enterobacter sp. TBS_079 0.80 MPMX20_01070 Inner membrane protein YbaN 0.94 MPMX20_03277 Glutamate-pyruvate aminotransferase AlaC low > 85
Enterobacter asburiae PDN3 0.77 EX28DRAFT_2490 Uncharacterized protein conserved in bacteria 0.94 EX28DRAFT_0240 Aspartate/tyrosine/aromatic aminotransferase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF4386 FIG039061: hypothetical protein related to heme utilization 0.96 GFF1970 Uncharacterized PLP-dependent aminotransferase YfdZ low > 78
Klebsiella michiganensis M5al 0.74 BWI76_RS06810 hypothetical protein 0.96 BWI76_RS20495 alanine transaminase low > 92
Pantoea sp. MT58 0.62 IAI47_14485 DUF454 family protein 0.91 IAI47_05575 alanine transaminase 0.26 44
Rahnella sp. WP5 0.62 EX31_RS22500 DUF454 family protein 0.88 EX31_RS20015 alanine transaminase low > 89
Dickeya dianthicola 67-19 0.56 HGI48_RS05820 DUF454 family protein 0.89 HGI48_RS14755 alanine transaminase — —
Dickeya dadantii 3937 0.56 DDA3937_RS05770 DUF454 family protein 0.89 DDA3937_RS14825 alanine transaminase low > 74
Pectobacterium carotovorum WPP14 0.56 HER17_RS15715 DUF454 family protein 0.91 HER17_RS06655 alanine transaminase low > 75
Serratia liquefaciens MT49 0.55 IAI46_05220 DUF454 family protein 0.90 IAI46_18180 alanine transaminase low > 86
Dickeya dianthicola ME23 0.54 DZA65_RS06145 DUF454 family protein 0.89 DZA65_RS15705 alanine transaminase low > 75
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_3740 Protein of unknown function DUF454 0.86 Psyr_0468 Aminotransferase, class I and II low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_3740 Protein of unknown function DUF454 0.86 Psyr_0468 Aminotransferase, class I and II low > 86
Pseudomonas fluorescens SBW25 0.38 PFLU_RS21930 DUF454 domain-containing protein 0.87 PFLU_RS23580 alanine transaminase low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS21930 DUF454 domain-containing protein 0.87 PFLU_RS23580 alanine transaminase low > 109
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_18420 hypothetical protein 0.86 AO353_03235 glutamate-pyruvate aminotransferase low > 101
Pseudomonas simiae WCS417 0.37 PS417_19960 membrane protein 0.87 PS417_21975 glutamate-pyruvate aminotransferase low > 88
Pseudomonas putida KT2440 0.37 PP_4518 conserved protein of unknown function 0.87 PP_0817 aminotransferase low > 96
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_3531 FIG039061: hypothetical protein related to heme utilization 0.87 Pf1N1B4_555 Uncharacterized PLP-dependent aminotransferase YfdZ low > 87
Pseudomonas stutzeri RCH2 0.36 Psest_1866 Uncharacterized protein conserved in bacteria 0.16 Psest_1470 succinyldiaminopimelate transaminase 0.18 31
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_2647 FIG039061: hypothetical protein related to heme utilization 0.87 Pf6N2E2_2862 Uncharacterized PLP-dependent aminotransferase YfdZ low > 103
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_04060 hypothetical protein 0.87 AO356_05050 glutamate-pyruvate aminotransferase low > 104
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF2586 FIG039061: hypothetical protein related to heme utilization 0.15 GFF4553 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) low > 90
Pseudomonas sp. RS175 0.35 PFR28_00786 Inner membrane protein YbaN 0.87 PFR28_00596 Glutamate-pyruvate aminotransferase AlaC low > 88
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_4425 FIG039061: hypothetical protein related to heme utilization 0.87 PfGW456L13_1928 Uncharacterized PLP-dependent aminotransferase YfdZ low > 87
Pseudomonas sp. S08-1 0.35 OH686_20660 Inner membrane protein YbaN 0.89 OH686_04000 Glutamate-pyruvate aminotransferase AlaC low > 80
Acidovorax sp. GW101-3H11 0.33 Ac3H11_535 Hypothetical protein DUF454 0.82 Ac3H11_3720 Uncharacterized PLP-dependent aminotransferase YfdZ low > 79
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_2077 Uncharacterized protein conserved in bacteria 0.51 Ga0059261_1288 Aspartate/tyrosine/aromatic aminotransferase low > 68
Bosea sp. OAE506 0.31 ABIE41_RS15805 YbaN family protein 0.48 ABIE41_RS19175 LL-diaminopimelate aminotransferase — —
Agrobacterium fabrum C58 0.31 Atu2457 hypothetical protein 0.48 Atu1589 aminotransferase, class I low > 89
Variovorax sp. SCN45 0.27 GFF5173 Hypothetical protein DUF454 0.15 GFF254 N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17), type 2 — —
Rhizobium sp. OAE497 0.27 ABIE40_RS23650 YbaN family protein 0.51 ABIE40_RS08645 LL-diaminopimelate aminotransferase low > 107
Castellaniella sp019104865 MT123 0.26 ABCV34_RS06460 YbaN family protein 0.78 ABCV34_RS02290 alanine transaminase low > 48
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS22710 hypothetical protein 0.80 HSERO_RS12800 aspartate aminotransferase low > 78
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS22025 YbaN family protein 0.29 ABI39_RS10505 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 72
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS20500 YbaN family protein 0.29 HMPREF1058_RS14790 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 67
Bacteroides stercoris CC31F 0.20 HMPREF1181_RS13895 YbaN family protein 0.29 HMPREF1181_RS06565 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 56

Not shown: 10 genomes with orthologs for ECD_00419 only; 27 genomes with orthologs for ECD_02289 only