Conservation of cofitness between ECD_00898 and ECD_02237 in Escherichia coli BL21

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00898 dimethyl sulfoxide reductase, anaerobic, subunit A 1.0 ECD_02237 amidophosphoribosyltransferase 0.77 18
Escherichia coli BW25113 1.00 b0894 dmsA anaerobic dimethyl sulfoxide reductase subunit A (VIMSS) 1.00 b2312 purF amidophosphoribosyltransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02774 Dimethyl sulfoxide reductase DmsA 1.00 OHPLBJKB_01393 Amidophosphoribosyltransferase low > 73
Escherichia coli ECRC101 1.00 MCAODC_24935 dmsA dimethylsulfoxide reductase subunit A 1.00 MCAODC_13755 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC102 1.00 NIAGMN_03265 dmsA dimethylsulfoxide reductase subunit A 1.00 NIAGMN_20485 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC101 1.00 OKFHMN_05545 dmsA dimethylsulfoxide reductase subunit A 1.00 OKFHMN_22715 purF amidophosphoribosyltransferase — —
Escherichia coli ECOR27 1.00 NOLOHH_22115 dmsA dimethylsulfoxide reductase subunit A 1.00 NOLOHH_14335 purF amidophosphoribosyltransferase low > 57
Escherichia coli ECRC99 1.00 KEDOAH_22190 dmsA dimethylsulfoxide reductase subunit A 1.00 KEDOAH_05480 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC98 1.00 JDDGAC_09355 dmsA dimethylsulfoxide reductase subunit A 1.00 JDDGAC_26675 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC62 1.00 BNILDI_20370 dmsA dimethylsulfoxide reductase subunit A 1.00 BNILDI_13255 purF amidophosphoribosyltransferase — —
Escherichia coli ECOR38 1.00 HEPCGN_22965 dmsA dimethylsulfoxide reductase subunit A 1.00 HEPCGN_21910 purF amidophosphoribosyltransferase low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04755 dimethylsulfoxide reductase subunit A 1.00 ECOLIN_RS13405 amidophosphoribosyltransferase — —
Escherichia fergusonii Becca 0.99 EFB2_03167 Dimethyl sulfoxide reductase DmsA 1.00 EFB2_01546 Amidophosphoribosyltransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF4898 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) 0.97 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 78
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2038 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 0.96 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) low > 76
Enterobacter sp. TBS_079 0.89 MPMX20_01556 Dimethyl sulfoxide reductase DmsA 0.96 MPMX20_03247 Amidophosphoribosyltransferase low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS09680 dimethyl sulfoxide reductase subunit A 0.97 BWI76_RS20350 amidophosphoribosyltransferase low > 92
Rahnella sp. WP5 0.82 EX31_RS18500 dimethylsulfoxide reductase subunit A 0.88 EX31_RS19570 amidophosphoribosyltransferase 0.48 9
Desulfovibrio vulgaris Miyazaki F 0.57 DvMF_1612 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family (RefSeq) 0.28 DvMF_2307 amidophosphoribosyltransferase (RefSeq) low > 51
Shewanella oneidensis MR-1 0.38 SO1429 dmaA-1 anaerobic dimethyl sulfoxide reductase, A subunit (NCBI ptt file) 0.73 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) low > 76
Dickeya dianthicola 67-19 0.20 HGI48_RS03810 molybdopterin-dependent oxidoreductase 0.88 HGI48_RS14405 amidophosphoribosyltransferase low > 71
Ralstonia sp. UNC404CL21Col 0.14 ABZR87_RS02030 molybdopterin oxidoreductase family protein 0.59 ABZR87_RS14465 amidophosphoribosyltransferase — —
Ralstonia solanacearum PSI07 0.13 RPSI07_RS10890 molybdopterin oxidoreductase family protein 0.59 RPSI07_RS14765 amidophosphoribosyltransferase — —
Burkholderia phytofirmans PsJN 0.13 BPHYT_RS17300 molybdopterin oxidoreductase 0.56 BPHYT_RS33840 amidophosphoribosyltransferase low > 109
Paraburkholderia graminis OAS925 0.13 ABIE53_003626 anaerobic selenocysteine-containing dehydrogenase 0.56 ABIE53_004816 amidophosphoribosyltransferase — —
Herbaspirillum seropedicae SmR1 0.13 HSERO_RS19290 molybdopterin oxidoreductase 0.56 HSERO_RS16445 amidophosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.13 RALBFv3_RS06350 molybdopterin oxidoreductase family protein 0.58 RALBFv3_RS02550 amidophosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.13 UW163_RS07275 molybdopterin oxidoreductase family protein 0.58 UW163_RS11175 amidophosphoribosyltransferase — —
Cupriavidus basilensis FW507-4G11 0.13 RR42_RS18180 molybdopterin oxidoreductase 0.56 RR42_RS14325 amidophosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.13 RS_RS14300 molybdopterin oxidoreductase family protein 0.58 RS_RS09930 amidophosphoribosyltransferase — —
Paraburkholderia sabiae LMG 24235 0.13 QEN71_RS27460 molybdopterin oxidoreductase family protein 0.53 QEN71_RS17680 amidophosphoribosyltransferase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.12 H281DRAFT_06225 Anaerobic selenocysteine-containing dehydrogenase 0.56 H281DRAFT_06060 amidophosphoribosyltransferase low > 103
Azospirillum brasilense Sp245 0.12 AZOBR_RS09575 dehydrogenase 0.30 AZOBR_RS08310 amidophosphoribosyltransferase low > 97
Acidovorax sp. GW101-3H11 0.12 Ac3H11_4517 Anaerobic dehydrogenases, typically selenocysteine-containing 0.55 Ac3H11_2608 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.11 GFF400 Anaerobic dehydrogenases, typically selenocysteine-containing 0.54 GFF300 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Agrobacterium fabrum C58 0.11 Atu1136 reductase 0.29 Atu1075 amidophosphoribosyltransferase low > 89
Sinorhizobium meliloti 1021 0.11 SMc00609 anaerobic dimethyl sulfoxide reductase subunit A 0.28 SMc00554 amidophosphoribosyltransferase low > 103

Not shown: 0 genomes with orthologs for ECD_00898 only; 59 genomes with orthologs for ECD_02237 only