Conservation of cofitness between ECD_02659 and ECD_02182 in Escherichia coli BL21

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02659 glycine cleavage system transcriptional activator; autorepressor 1.0 ECD_02182 undecaprenyl phosphate-alpha-L-ara4FN deformylase 0.73 9
Escherichia coli Nissle 1917 1.00 ECOLIN_RS15650 glycine cleavage system transcriptional regulator GcvA 0.98 ECOLIN_RS13140 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase
Escherichia coli BW25113 1.00 b2808 gcvA DNA-binding transcriptional dual regulator (NCBI) 1.00 b2256 yfbH hypothetical protein (NCBI) low > 76
Escherichia coli ECRC98 1.00 JDDGAC_23785 gcvA glycine cleavage system transcriptional regulator GcvA 1.00 JDDGAC_26945 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase low > 86
Escherichia coli ECOR38 1.00 HEPCGN_19375 gcvA glycine cleavage system transcriptional regulator GcvA 0.98 HEPCGN_22195 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase 0.70 31
Escherichia coli ECRC102 1.00 NIAGMN_17890 gcvA glycine cleavage system transcriptional regulator GcvA 1.00 NIAGMN_20750 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase
Escherichia coli ECRC101 1.00 MCAODC_10645 gcvA glycine cleavage system transcriptional regulator GcvA 1.00 MCAODC_14020 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase low > 87
Escherichia coli ECOR27 1.00 NOLOHH_12000 gcvA glycine cleavage system transcriptional regulator GcvA 1.00 NOLOHH_14605 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase low > 75
Escherichia coli ECRC99 1.00 KEDOAH_08010 gcvA glycine cleavage system transcriptional regulator GcvA 1.00 KEDOAH_05215 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase
Escherichia coli ECRC62 1.00 BNILDI_10505 gcvA glycine cleavage system transcriptional regulator GcvA 1.00 BNILDI_13520 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase low > 75
Escherichia fergusonii Becca 1.00 EFB2_01109 Glycine cleavage system transcriptional activator 0.98 EFB2_01600 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00923 Glycine cleavage system transcriptional activator 1.00 OHPLBJKB_01455 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD low > 73
Escherichia coli ECRC100 1.00 OKFHMN_20120 gcvA glycine cleavage system transcriptional regulator GcvA 1.00 OKFHMN_22980 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.99 GFF4865 Glycine cleavage system transcriptional activator GcvA 0.74 GFF1861 Polymyxin resistance protein PmrJ, predicted deacetylase low > 78
Enterobacter asburiae PDN3 0.98 EX28DRAFT_2883 Transcriptional regulator 0.72 EX28DRAFT_4085 Predicted xylanase/chitin deacetylase low > 76
Enterobacter sp. TBS_079 0.97 MPMX20_03671 Glycine cleavage system transcriptional activator 0.70 MPMX20_04377 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD low > 85
Klebsiella michiganensis M5al 0.97 BWI76_RS22955 transcriptional regulator GcvA 0.68 BWI76_RS26470 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 92
Pantoea sp. MT58 0.93 IAI47_04025 transcriptional regulator GcvA 0.64 IAI47_21610 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 76
Dickeya dadantii 3937 0.93 DDA3937_RS05050 transcriptional regulator GcvA 0.66 DDA3937_RS21375 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 74
Erwinia tracheiphila SCR3 0.93 LU632_RS06255 transcriptional regulator GcvA 0.67 LU632_RS16480 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 74
Dickeya dianthicola ME23 0.93 DZA65_RS05390 transcriptional regulator GcvA 0.66 DZA65_RS22625 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 75
Dickeya dianthicola 67-19 0.93 HGI48_RS05050 transcriptional regulator GcvA 0.65 HGI48_RS21640 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 71
Pectobacterium carotovorum WPP14 0.92 HER17_RS16415 transcriptional regulator GcvA 0.59 HER17_RS06535 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 75
Serratia liquefaciens MT49 0.91 IAI46_20340 transcriptional regulator GcvA 0.62 IAI46_11030 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 86
Rahnella sp. WP5 0.89 EX31_RS13110 transcriptional regulator GcvA 0.63 EX31_RS14005 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 89
Paraburkholderia graminis OAS925 0.38 ABIE53_001336 LysR family glycine cleavage system transcriptional activator 0.26 ABIE53_002016 undecaprenyl phosphate-alpha-L-ara4FN deformylase
Ralstonia solanacearum GMI1000 0.36 RS_RS13815 transcriptional regulator GcvA 0.27 RS_RS06610 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS22095 transcriptional regulator GcvA 0.26 RALBFv3_RS15830 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase
Ralstonia solanacearum UW163 0.36 UW163_RS22635 transcriptional regulator GcvA 0.26 UW163_RS13275 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS01495 transcriptional regulator GcvA 0.27 ABZR87_RS11400 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase
Ralstonia solanacearum PSI07 0.35 RPSI07_RS11375 transcriptional regulator GcvA 0.27 RPSI07_RS17535 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS11810 LysR family transcriptional regulator 0.28 BPHYT_RS08910 polysaccharide deacetylase
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_02051 LysR family transcriptional regulator, glycine cleavage system transcriptional activator 0.28 H281DRAFT_00801 Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS01310 transcriptional regulator GcvA 0.28 QEN71_RS22450 polysaccharide deacetylase family protein
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS26815 LysR family transcriptional regulator 0.25 RR42_RS30925 chitin deacetylase
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS07925 LysR family transcriptional regulator 0.24 HSERO_RS10415 xylanase
Pseudomonas simiae WCS417 0.31 PS417_14890 LysR family transcriptional regulator 0.60 PS417_13800 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase low > 88
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS16910 LysR family transcriptional regulator 0.59 PFLU_RS14820 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 109
Pseudomonas fluorescens SBW25 0.30 PFLU_RS16910 LysR family transcriptional regulator 0.59 PFLU_RS14820 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 109
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_3521 transcriptional regulator, LysR family 0.60 Psyr_2692 Polysaccharide deacetylase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_3521 transcriptional regulator, LysR family 0.60 Psyr_2692 Polysaccharide deacetylase low > 86
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_15505 LysR family transcriptional regulator 0.59 AO353_25545 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
Dechlorosoma suillum PS 0.27 Dsui_2033 transcriptional regulator 0.26 Dsui_2912 putative xylanase/chitin deacetylase low > 51

Not shown: 45 genomes with orthologs for ECD_02659 only; 0 genomes with orthologs for ECD_02182 only