Conservation of cofitness between ECD_02179 and ECD_02182 in Escherichia coli BL21

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02179 uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent 1.0 ECD_02182 undecaprenyl phosphate-alpha-L-ara4FN deformylase 0.94 3
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01458 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 1.00 OHPLBJKB_01455 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD low > 73
Escherichia coli ECRC62 1.00 BNILDI_13535 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 BNILDI_13520 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase low > 75
Escherichia coli ECOR27 0.99 NOLOHH_14620 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 NOLOHH_14605 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase low > 75
Escherichia coli ECOR38 0.99 HEPCGN_22210 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.98 HEPCGN_22195 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase low > 87
Escherichia coli BW25113 0.99 b2253 arnB uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) 1.00 b2256 yfbH hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.97 ECOLIN_RS13125 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.98 ECOLIN_RS13140 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase — —
Escherichia coli ECRC100 0.95 OKFHMN_22995 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 OKFHMN_22980 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase low > 80
Escherichia coli ECRC98 0.95 JDDGAC_26960 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 JDDGAC_26945 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase low > 86
Escherichia coli ECRC99 0.95 KEDOAH_05200 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 KEDOAH_05215 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase — —
Escherichia coli ECRC102 0.95 NIAGMN_20765 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 NIAGMN_20750 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase — —
Escherichia coli ECRC101 0.95 MCAODC_14035 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 MCAODC_14020 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase low > 87
Escherichia fergusonii Becca 0.95 EFB2_01603 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.98 EFB2_01600 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) 0.74 GFF1861 Polymyxin resistance protein PmrJ, predicted deacetylase low > 78
Enterobacter sp. TBS_079 0.81 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.70 MPMX20_04377 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD low > 85
Enterobacter asburiae PDN3 0.81 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.72 EX28DRAFT_4085 Predicted xylanase/chitin deacetylase low > 76
Klebsiella michiganensis M5al 0.79 BWI76_RS26485 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.68 BWI76_RS26470 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 92
Erwinia tracheiphila SCR3 0.78 LU632_RS16495 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.67 LU632_RS16480 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 74
Dickeya dadantii 3937 0.78 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.66 DDA3937_RS21375 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 74
Dickeya dianthicola ME23 0.77 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.66 DZA65_RS22625 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 75
Dickeya dianthicola 67-19 0.77 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.65 HGI48_RS21640 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 71
Pectobacterium carotovorum WPP14 0.72 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.59 HER17_RS06535 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 75
Serratia liquefaciens MT49 0.71 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.62 IAI46_11030 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 86
Pantoea sp. MT58 0.71 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.64 IAI47_21610 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 76
Rahnella sp. WP5 0.70 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.63 EX31_RS14005 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 89
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_25530 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase 0.59 AO353_25545 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.60 Psyr_2692 Polysaccharide deacetylase low > 86
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.60 Psyr_2692 Polysaccharide deacetylase low > 86
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS15735 pyridoxal phosphate-dependent aminotransferase 0.25 RR42_RS30925 chitin deacetylase — —
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_00805 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.28 H281DRAFT_00801 Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family — —
Paraburkholderia graminis OAS925 0.32 ABIE53_002021 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.26 ABIE53_002016 undecaprenyl phosphate-alpha-L-ara4FN deformylase — —
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS22430 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.28 QEN71_RS22450 polysaccharide deacetylase family protein — —
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS08930 aminotransferase DegT 0.28 BPHYT_RS08910 polysaccharide deacetylase — —
Ralstonia solanacearum PSI07 0.32 RPSI07_RS17515 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.27 RPSI07_RS17535 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase — —
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS10435 aminotransferase DegT 0.24 HSERO_RS10415 xylanase — —
Pseudomonas simiae WCS417 0.31 PS417_27245 aminotransferase DegT 0.60 PS417_13800 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase 0.45 6
Pseudomonas fluorescens SBW25 0.31 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.59 PFLU_RS14820 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase 0.80 23
Ralstonia solanacearum UW163 0.31 UW163_RS13295 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.26 UW163_RS13275 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase — —
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.59 PFLU_RS14820 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 109
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS15850 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.26 RALBFv3_RS15830 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase — —
Ralstonia solanacearum GMI1000 0.30 RS_RS06630 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.27 RS_RS06610 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase — —
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS11420 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.27 ABZR87_RS11400 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase — —
Dechlorosoma suillum PS 0.27 Dsui_0082 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 0.26 Dsui_2912 putative xylanase/chitin deacetylase — —

Not shown: 44 genomes with orthologs for ECD_02179 only; 0 genomes with orthologs for ECD_02182 only