Conservation of cofitness between ECD_00617 and ECD_01181 in Escherichia coli BL21

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00617 ribonucleoside hydrolase 1 1.0 ECD_01181 C4-dicarboxylic acid transporter 0.63 16
Escherichia coli BW25113 1.00 b0651 rihA ribonucleoside hydrolase 1 (NCBI) 1.00 b1206 ychM orf, hypothetical protein (VIMSS) 0.11 72
Escherichia coli ECRC98 1.00 JDDGAC_10920 rihA pyrimidine-specific ribonucleoside hydrolase RihA 0.98 JDDGAC_06150 dauA C4-dicarboxylic acid transporter DauA — —
Escherichia coli ECRC101 1.00 MCAODC_26490 rihA pyrimidine-specific ribonucleoside hydrolase RihA 0.98 MCAODC_21835 dauA C4-dicarboxylic acid transporter DauA — —
Escherichia coli ECRC101 1.00 OKFHMN_07275 rihA pyrimidine-specific ribonucleoside hydrolase RihA 0.98 OKFHMN_28425 dauA C4-dicarboxylic acid transporter DauA — —
Escherichia coli ECRC102 1.00 NIAGMN_05330 rihA pyrimidine-specific ribonucleoside hydrolase RihA 0.98 NIAGMN_27810 dauA C4-dicarboxylic acid transporter DauA — —
Escherichia coli ECRC99 1.00 KEDOAH_20695 rihA pyrimidine-specific ribonucleoside hydrolase RihA 0.98 KEDOAH_25420 dauA C4-dicarboxylic acid transporter DauA — —
Escherichia coli ECRC62 0.99 BNILDI_21670 rihA pyrimidine-specific ribonucleoside hydrolase RihA 0.98 BNILDI_18790 dauA C4-dicarboxylic acid transporter DauA — —
Escherichia coli ECOR27 0.99 NOLOHH_23660 rihA pyrimidine-specific ribonucleoside hydrolase RihA 0.98 NOLOHH_20635 dauA C4-dicarboxylic acid transporter DauA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03062 Pyrimidine-specific ribonucleoside hydrolase RihA 0.98 OHPLBJKB_02481 C4-dicarboxylic acid transporter DauA low > 73
Escherichia coli ECOR38 0.99 HEPCGN_00955 rihA pyrimidine-specific ribonucleoside hydrolase RihA 0.98 HEPCGN_24890 dauA C4-dicarboxylic acid transporter DauA low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS03505 pyrimidine-specific ribonucleoside hydrolase RihA 1.00 ECOLIN_RS07295 C4-dicarboxylic acid transporter DauA — —
Escherichia fergusonii Becca 0.99 EFB2_03448 Pyrimidine-specific ribonucleoside hydrolase RihA 0.98 EFB2_02721 C4-dicarboxylic acid transporter DauA low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4569 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.91 GFF2781 Putative sulfate permease low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS13490 pyrimidine-specific ribonucleoside hydrolase RihA 0.92 BWI76_RS17465 C4-dicarboxylic acid transporter DauA low > 92
Enterobacter sp. TBS_079 0.89 MPMX20_01302 Pyrimidine-specific ribonucleoside hydrolase RihA 0.89 MPMX20_02641 C4-dicarboxylic acid transporter DauA low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2320 Inosine-uridine nucleoside N-ribohydrolase 0.88 EX28DRAFT_0825 high affinity sulphate transporter 1 0.51 16
Shewanella loihica PV-4 0.74 Shew_0697 rihA ribonucleoside hydrolase 1 (RefSeq) 0.40 Shew_0497 putative sulfate transporter YchM (RefSeq) low > 60
Shewanella sp. ANA-3 0.73 Shewana3_3476 rihA ribonucleoside hydrolase 1 (RefSeq) 0.55 Shewana3_3154 putative sulfate transporter YchM (RefSeq) low > 73
Shewanella oneidensis MR-1 0.73 SO0811 inosine-uridine preferring nucleoside hydrolase family protein (NCBI ptt file) 0.55 SO3553 sulfate permease family protein (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.62 IAI46_05975 pyrimidine-specific ribonucleoside hydrolase RihA 0.69 IAI46_10305 C4-dicarboxylic acid transporter DauA low > 86
Sinorhizobium meliloti 1021 0.43 SMc01105 uridine nucleosidase (EC 3.2.2.3) (from data) 0.26 SMc00476 transport transmembrane protein low > 103
Dinoroseobacter shibae DFL-12 0.42 Dshi_1158 Inosine/uridine-preferring nucleoside hydrolase (RefSeq) 0.14 Dshi_2067 sulphate transporter (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.40 PGA1_c11490 pyrimidine-specific ribonucleoside hydrolase RihA 0.13 PGA1_c06390 putative sulfate transporter low > 62
Agrobacterium fabrum C58 0.40 Atu0374 inosine-uridine preferring nucleoside hydrolase 0.14 Atu1156 sulfate permease low > 89
Rahnella sp. WP5 0.40 EX31_RS20270 nucleoside hydrolase 0.68 EX31_RS07290 C4-dicarboxylic acid transporter DauA low > 89
Rhizobium sp. OAE497 0.39 ABIE40_RS01655 nucleoside hydrolase 0.13 ABIE40_RS06660 SulP family inorganic anion transporter low > 107
Pectobacterium carotovorum WPP14 0.37 HER17_RS00105 nucleoside hydrolase 0.71 HER17_RS09730 C4-dicarboxylic acid transporter DauA low > 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF2248 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.27 GFF1211 Sulfate permease low > 90
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_20845 uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7) (from data) 0.30 AO353_10315 sulfate transporter low > 101
Variovorax sp. SCN45 0.34 GFF2986 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.25 GFF2584 Sulfate permease low > 127
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_6029 uridine nucleosidase (EC 3.2.2.3) (from data) 0.44 Pf1N1B4_2936 Putative sulfate permease low > 87
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_167 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.45 Pf6N2E2_5239 Putative sulfate permease low > 103
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_00940 uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7) (from data) 0.45 AO356_16580 transporter low > 104
Pseudomonas sp. RS175 0.33 PFR28_02731 Pyrimidine-specific ribonucleoside hydrolase RihB 0.44 PFR28_03638 C4-dicarboxylic acid transporter DauA low > 88
Pseudomonas fluorescens SBW25 0.33 PFLU_RS20350 nucleoside hydrolase 0.17 PFLU_RS00125 SulP family inorganic anion transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS20350 nucleoside hydrolase 0.17 PFLU_RS00125 SulP family inorganic anion transporter low > 109
Pseudomonas simiae WCS417 0.33 PS417_18375 hypothetical protein 0.17 PS417_00130 SulP family inorganic anion transporter low > 88
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_3906 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.16 PfGW456L13_643 Sulfate permease low > 87
Pseudomonas putida KT2440 0.33 PP_2460 ribonucleoside hydrolase 0.14 PP_4112 Sulphate transporter low > 96
Bosea sp. OAE506 0.29 ABIE41_RS05160 nucleoside hydrolase 0.13 ABIE41_RS20915 SulP family inorganic anion transporter low > 77
Brevundimonas sp. GW460-12-10-14-LB2 0.26 A4249_RS15760 nucleoside hydrolase 0.15 A4249_RS00185 SulP family inorganic anion transporter — —
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.1203.1 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.13 Xcc-8004.821.1 Sulfate permease low > 74
Mycobacterium tuberculosis H37Rv 0.21 Rv3393 Probable nucleoside hydrolase IunH (purine nucleosidase) 0.14 Rv1707 Probable conserved transmembrane protein low > 58

Not shown: 5 genomes with orthologs for ECD_00617 only; 45 genomes with orthologs for ECD_01181 only