Conservation of cofitness between ECD_03418 and ECD_00974 in Escherichia coli BL21

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03418 D-xylose transporter subunit 1.0 ECD_00974 Modulator of FtsH protease, inner membrane protein 0.62 32
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00138 D-xylose-binding periplasmic protein 1.00 OHPLBJKB_02696 Modulator of FtsH protease YccA 0.46 25
Escherichia coli ECRC100 1.00 OKFHMN_15950 xylF D-xylose ABC transporter substrate-binding protein 0.99 OKFHMN_05170 yccA FtsH protease modulator YccA low > 80
Escherichia coli ECRC101 1.00 MCAODC_06465 xylF D-xylose ABC transporter substrate-binding protein 0.99 MCAODC_24560 yccA FtsH protease modulator YccA low > 87
Escherichia coli ECRC98 1.00 JDDGAC_19580 xylF D-xylose ABC transporter substrate-binding protein 0.99 JDDGAC_08780 yccA FtsH protease modulator YccA 0.49 82
Escherichia coli ECRC102 1.00 NIAGMN_13710 xylF D-xylose ABC transporter substrate-binding protein 0.99 NIAGMN_02890 yccA FtsH protease modulator YccA — —
Escherichia coli ECRC99 1.00 KEDOAH_12200 xylF D-xylose ABC transporter substrate-binding protein 0.99 KEDOAH_22565 yccA FtsH protease modulator YccA — —
Escherichia coli BW25113 1.00 b3566 xylF D-xylose transporter subunit (NCBI) 1.00 b0970 yccA inner membrane protein (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20395 D-xylose ABC transporter substrate-binding protein 1.00 ECOLIN_RS05100 FtsH protease modulator YccA low > 55
Escherichia coli ECRC62 1.00 BNILDI_03650 xylF D-xylose ABC transporter substrate-binding protein 1.00 BNILDI_19890 yccA FtsH protease modulator YccA low > 75
Escherichia coli ECOR38 1.00 HEPCGN_14835 xylF D-xylose ABC transporter substrate-binding protein 1.00 HEPCGN_23350 yccA FtsH protease modulator YccA low > 87
Escherichia coli ECOR27 1.00 NOLOHH_07895 xylF D-xylose ABC transporter substrate-binding protein 1.00 NOLOHH_21725 yccA FtsH protease modulator YccA low > 75
Escherichia fergusonii Becca 1.00 EFB2_00241 D-xylose-binding periplasmic protein 1.00 EFB2_03101 Modulator of FtsH protease YccA low > 86
Klebsiella michiganensis M5al 0.91 BWI76_RS27030 D-xylose transporter subunit XylF 0.91 BWI76_RS10070 BAX inhibitor protein low > 92
Enterobacter sp. TBS_079 0.89 MPMX20_00164 D-xylose-binding periplasmic protein 0.96 MPMX20_01622 Modulator of FtsH protease YccA low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_3831 D-xylose ABC transporter, substrate-binding protein 0.88 EX28DRAFT_1964 Integral membrane protein, interacts with FtsH low > 76
Rahnella sp. WP5 0.84 EX31_RS09760 D-xylose ABC transporter substrate-binding protein 0.69 EX31_RS17975 FtsH protease modulator YccA low > 89
Pantoea sp. MT58 0.83 IAI47_00190 D-xylose ABC transporter substrate-binding protein 0.76 IAI47_12580 FtsH protease modulator YccA low > 76
Serratia liquefaciens MT49 0.82 IAI46_00285 D-xylose ABC transporter substrate-binding protein 0.72 IAI46_08945 FtsH protease modulator YccA low > 86
Dickeya dadantii 3937 0.82 DDA3937_RS20930 D-xylose ABC transporter substrate-binding protein 0.77 DDA3937_RS15185 FtsH protease modulator YccA low > 74
Dickeya dianthicola ME23 0.82 DZA65_RS00315 D-xylose ABC transporter substrate-binding protein 0.77 DZA65_RS16085 FtsH protease modulator YccA low > 75
Dickeya dianthicola 67-19 0.82 HGI48_RS00315 D-xylose ABC transporter substrate-binding protein 0.77 HGI48_RS15260 FtsH protease modulator YccA low > 71
Pectobacterium carotovorum WPP14 0.79 HER17_RS21080 D-xylose ABC transporter substrate-binding protein 0.79 HER17_RS08480 FtsH protease modulator YccA low > 75
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS22460 xylose ABC transporter substrate-binding protein 0.33 HSERO_RS14820 membrane protein — —
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS18220 D-xylose ABC transporter substrate-binding protein 0.29 ABZR87_RS10890 Bax inhibitor-1/YccA family protein low > 80
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS32820 xylose ABC transporter substrate-binding protein 0.30 BPHYT_RS12600 membrane protein — —
Paraburkholderia graminis OAS925 0.60 ABIE53_004930 D-xylose transport system substrate-binding protein 0.30 ABIE53_002746 modulator of FtsH protease low > 113
Pseudomonas simiae WCS417 0.60 PS417_10940 sugar ABC transporter substrate-binding protein 0.51 PS417_16310 membrane protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_1455 Xylose ABC transporter, periplasmic xylose-binding protein XylF 0.48 Pf6N2E2_1239 Putative TEGT family carrier/transport protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_28505 sugar ABC transporter substrate-binding protein 0.49 AO356_25955 hypothetical protein low > 104
Pseudomonas sp. RS175 0.60 PFR28_02349 D-xylose-binding periplasmic protein 0.48 PFR28_02158 Modulator of FtsH protease YccA low > 88
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS25870 D-xylose ABC transporter substrate-binding protein 0.32 QEN71_RS05955 Bax inhibitor-1/YccA family protein low > 153
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_2884 xylose-binding protein 0.50 Psyr_3164 Protein of unknown function UPF0005 low > 86
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_03877 xylose-binding protein 0.29 H281DRAFT_00512 hypothetical protein low > 103
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein 0.51 PFLU_RS18360 Bax inhibitor-1/YccA family protein low > 109
Pseudomonas fluorescens SBW25 0.59 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein 0.51 PFLU_RS18360 Bax inhibitor-1/YccA family protein low > 109
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_2884 xylose-binding protein 0.50 Psyr_3164 Protein of unknown function UPF0005 low > 86
Ralstonia solanacearum GMI1000 0.58 RS_RS24945 D-xylose ABC transporter substrate-binding protein 0.27 RS_RS06060 BAX inhibitor (BI)-1/YccA family protein 0.25 78
Ralstonia solanacearum PSI07 0.56 RPSI07_RS07635 D-xylose ABC transporter substrate-binding protein 0.27 RPSI07_RS18125 BAX inhibitor (BI)-1/YccA family protein low > 81
Ralstonia solanacearum UW163 0.55 UW163_RS16755 D-xylose ABC transporter substrate-binding protein 0.28 UW163_RS12715 BAX inhibitor (BI)-1/YccA family protein — —
Ralstonia solanacearum IBSBF1503 0.55 RALBFv3_RS23505 D-xylose ABC transporter substrate-binding protein 0.28 RALBFv3_RS15250 BAX inhibitor (BI)-1/YccA family protein — —
Variovorax sp. SCN45 0.38 GFF5603 D-xylose ABC transporter, substrate-binding protein XylF 0.27 GFF2840 Integral membrane protein, interacts with FtsH low > 127
Variovorax sp. OAS795 0.37 ABID97_RS01175 D-xylose ABC transporter substrate-binding protein 0.28 ABID97_RS10740 Bax inhibitor-1/YccA family protein 0.33 50
Acidovorax sp. GW101-3H11 0.28 Ac3H11_610 L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2) 0.27 Ac3H11_2845 Integral membrane protein, interacts with FtsH low > 79

Not shown: 8 genomes with orthologs for ECD_03418 only; 19 genomes with orthologs for ECD_00974 only