Conservation of cofitness between CSW01_13550 and CSW01_13980 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13550 O-succinylhomoserine (thiol)-lyase 1.0 CSW01_13980 LysR family transcriptional regulator 0.60 14
Enterobacter sp. TBS_079 0.59 MPMX20_04531 Cystathionine gamma-synthase 0.44 MPMX20_01977 putative HTH-type transcriptional regulator YahB low > 85
Enterobacter asburiae PDN3 0.59 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) 0.43 EX28DRAFT_1656 Transcriptional regulator low > 76
Klebsiella pneumoniae MKP103 0.59 KDGMDA_09295 cystathionine gamma-synthase 0.43 KDGMDA_23475 DNA-binding transcriptional activator PunR low > 95
Escherichia coli BW25113 0.59 b3939 metB cystathionine gamma-synthase (NCBI) 0.42 b1659 ydhB predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECOR38 0.59 HEPCGN_12345 metB cystathionine gamma-synthase 0.42 HEPCGN_05765 punR DNA-binding transcriptional activator PunR low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) 0.42 GFF3617 LysR-family transcriptional regulator YdhB low > 78
Escherichia coli Nissle 1917 0.59 ECOLIN_RS22725 cystathionine gamma-synthase 0.42 ECOLIN_RS09250 DNA-binding transcriptional activator PunR low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_04111 Cystathionine gamma-synthase 0.42 OHPLBJKB_02065 putative HTH-type transcriptional regulator YahB low > 74
Escherichia coli BL21 0.59 ECD_03825 cystathionine gamma-synthase, PLP-dependent 0.42 ECD_01630 LysR family putative transcriptional regulator low > 61
Shewanella sp. ANA-3 0.59 Shewana3_3614 cystathionine gamma-synthase (RefSeq) 0.52 Shewana3_2061 putative DNA-binding transcriptional regulator (RefSeq) low > 73
Escherichia fergusonii Becca 0.59 EFB2_04679 Cystathionine gamma-synthase 0.42 EFB2_02333 putative HTH-type transcriptional regulator YahB low > 86
Shewanella amazonensis SB2B 0.59 Sama_3171 cystathionine gamma-synthase (RefSeq) 0.52 Sama_1783 putative DNA-binding transcriptional regulator (RefSeq) low > 62
Serratia liquefaciens MT49 0.59 IAI46_24540 cystathionine gamma-synthase 0.45 IAI46_11235 LysR family transcriptional regulator low > 87
Escherichia coli ECRC62 0.59 BNILDI_05715 metB cystathionine gamma-synthase 0.42 BNILDI_16690 punR DNA-binding transcriptional activator PunR low > 75
Escherichia coli ECOR27 0.59 NOLOHH_05820 metB cystathionine gamma-synthase 0.42 NOLOHH_17900 punR DNA-binding transcriptional activator PunR low > 76
Escherichia coli ECRC102 0.59 NIAGMN_11430 metB cystathionine gamma-synthase 0.42 NIAGMN_00685 punR DNA-binding transcriptional activator PunR low > 80
Escherichia coli ECRC100 0.59 OKFHMN_13675 metB cystathionine gamma-synthase 0.42 OKFHMN_27380 punR DNA-binding transcriptional activator PunR low > 79
Escherichia coli ECRC99 0.59 KEDOAH_14485 metB cystathionine gamma-synthase 0.42 KEDOAH_00730 punR DNA-binding transcriptional activator PunR — —
Escherichia coli ECRC101 0.59 MCAODC_04175 metB cystathionine gamma-synthase 0.42 MCAODC_18030 punR DNA-binding transcriptional activator PunR low > 87
Escherichia coli ECRC98 0.59 JDDGAC_17300 metB cystathionine gamma-synthase 0.42 JDDGAC_01970 punR DNA-binding transcriptional activator PunR low > 87
Klebsiella michiganensis M5al 0.58 BWI76_RS00785 cystathionine gamma-synthase 0.43 BWI76_RS16515 LysR family transcriptional regulator low > 92
Erwinia tracheiphila SCR3 0.57 LU632_RS19640 metB cystathionine gamma-synthase 0.41 LU632_RS11185 LysR family transcriptional regulator low > 73
Shewanella oneidensis MR-1 0.57 SO4056 metB cystathionine gamma-synthase (NCBI ptt file) 0.51 SO2374 transcriptional regulator, LysR family (NCBI ptt file) low > 76
Erwinia tracheiphila HP pepo 2.2 0.57 IJEDHG_13020 metB cystathionine gamma-synthase 0.41 IJEDHG_25170 punR DNA-binding transcriptional activator PunR low > 61
Shewanella loihica PV-4 0.56 Shew_0520 O-succinylhomoserine (thiol)-lyase (RefSeq) 0.50 Shew_2013 putative DNA-binding transcriptional regulator (RefSeq) low > 60
Pantoea agglomerans CFBP13505 P0401 0.56 PagCFBP13505_RS18460 cystathionine gamma-synthase 0.44 PagCFBP13505_RS17790 LysR family transcriptional regulator low > 74
Rahnella sp. WP5 0.56 EX31_RS14215 cystathionine gamma-synthase 0.44 EX31_RS13835 LysR family transcriptional regulator low > 89
Pantoea sp. MT58 0.55 IAI47_00880 cystathionine gamma-synthase 0.44 IAI47_10800 LysR family transcriptional regulator low > 76
Dyella japonica UNC79MFTsu3.2 0.54 ABZR86_RS19030 cystathionine gamma-synthase 0.29 ABZR86_RS14560 LysR substrate-binding domain-containing protein low > 74
Erwinia amylovora T8 0.54 OLJFJH_06095 cystathionine gamma-synthase 0.43 OLJFJH_14515 DNA-binding transcriptional activator PunR low > 58
Sinorhizobium meliloti 1021 0.47 SMc02595 cystathionine gamma-synthase 0.15 SMa0353 LysR family transcriptional regulator low > 103
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_23295 cystathionine beta-lyase 0.15 AO353_28560 LysR family transcriptional regulator low > 101
Pseudomonas sp. DMC3 0.38 GFF3060 Cystathionine beta-lyase 0.17 GFF1218 putative HTH-type transcriptional regulator YahB low > 89
Pseudomonas lactucae CFBP13502 0.37 GEMAOFIL_02861 Cystathionine beta-lyase 0.42 GEMAOFIL_01742 putative HTH-type transcriptional regulator YahB low > 96
Pseudomonas orientalis W4I3 0.36 QF045_RS15175 cystathionine gamma-synthase 0.41 QF045_RS10750 DNA-binding transcriptional activator PunR low > 93
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS16625 cystathionine gamma-synthase 0.41 PFLU_RS08000 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.36 PFLU_RS16625 cystathionine gamma-synthase 0.41 PFLU_RS08000 LysR family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.32 PS417_11735 methionine gamma-lyase 0.42 PS417_08030 transcriptional regulator low > 88
Acinetobacter radioresistens SK82 0.32 MPMX26_01645 O-succinylhomoserine sulfhydrylase 0.11 MPMX26_01916 HTH-type transcriptional activator AllS low > 36
Azospirillum sp. SherDot2 0.32 MPMX19_06514 L-methionine gamma-lyase 0.15 MPMX19_06778 HTH-type transcriptional regulator YhaJ low > 112
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_03271 methionine gamma-lyase 0.13 CCNA_00832 LysR-family transcriptional regulator low > 67
Caulobacter crescentus NA1000 0.31 CCNA_03271 methionine gamma-lyase 0.13 CCNA_00832 LysR-family transcriptional regulator 0.89 66
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_3934 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.16 PfGW456L13_3137 Transcriptional regulator, LysR family low > 87
Pseudomonas sp. RS175 0.30 PFR28_02810 O-succinylhomoserine sulfhydrylase 0.15 PFR28_01506 putative HTH-type transcriptional regulator YahB low > 88
Variovorax sp. OAS795 0.27 ABID97_RS21630 O-succinylhomoserine sulfhydrylase 0.24 ABID97_RS29065 LysR family transcriptional regulator — —
Sphingobium sp. HT1-2 0.27 GFF3455 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.16 GFF5049 Transcriptional regulator, LysR family low > 95
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_3194 O-acetylhomoserine sulfhydrylase (EC:2.5.1.49) (from data) 0.15 Ga0059261_3906 Transcriptional regulator low > 68

Not shown: 71 genomes with orthologs for CSW01_13550 only; 0 genomes with orthologs for CSW01_13980 only