Conservation of cofitness between CSW01_01875 and CSW01_13810 in Vibrio cholerae E7946 ATCC 55056

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01875 hypothetical protein 1.0 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.84 13
Rahnella sp. WP5 0.66 EX31_RS04470 transcriptional regulator 0.79 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) low > 89
Dickeya dianthicola ME23 0.66 DZA65_RS20560 transcriptional regulator 0.81 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS19440 transcriptional regulator 0.81 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) low > 71
Serratia liquefaciens MT49 0.66 IAI46_23490 transcriptional regulator 0.81 IAI46_23770 phosphoenolpyruvate carboxykinase (ATP) low > 87
Dickeya dadantii 3937 0.66 DDA3937_RS19340 transcriptional regulator 0.81 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) low > 74
Erwinia tracheiphila SCR3 0.66 LU632_RS22710 transcriptional regulator 0.78 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) low > 73
Erwinia tracheiphila HP pepo 2.2 0.66 IJEDHG_12210 Uncharacterized protein YheO 0.78 IJEDHG_11970 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Erwinia amylovora T8 0.66 OLJFJH_03930 Uncharacterized protein YheO 0.78 OLJFJH_04150 phosphoenolpyruvate carboxykinase (ATP) low > 58
Pectobacterium carotovorum WPP14 0.65 HER17_RS02010 transcriptional regulator 0.80 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) low > 75
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS21525 transcriptional regulator 0.77 PagCFBP13505_RS18350 phosphoenolpyruvate carboxykinase (ATP) low > 74
Pantoea sp. MT58 0.65 IAI47_02055 transcriptional regulator 0.77 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF3726 YheO-like PAS domain 0.81 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 78
Escherichia coli ECOR38 0.64 HEPCGN_16130 yheO Uncharacterized protein YheO 0.81 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) low > 88
Escherichia coli Nissle 1917 0.64 ECOLIN_RS19165 transcriptional regulator 0.81 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) low > 55
Escherichia coli ECRC98 0.64 JDDGAC_20930 yheO Uncharacterized protein YheO 0.81 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Escherichia coli ECRC62 0.64 BNILDI_02420 yheO Uncharacterized protein YheO 0.81 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00357 Transcriptional regulator DauR 0.81 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) low > 74
Escherichia coli ECOR27 0.64 NOLOHH_09100 yheO Uncharacterized protein YheO 0.81 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) low > 76
Escherichia coli ECRC102 0.64 NIAGMN_15070 yheO Uncharacterized protein YheO 0.81 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) 0.61 9
Escherichia fergusonii Becca 0.64 EFB2_00477 Transcriptional regulator DauR 0.81 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Escherichia coli BL21 0.64 ECD_03197 putative PAS domain-containing DNA-binding transcriptional regulator 0.81 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] low > 61
Escherichia coli BW25113 0.64 b3346 yheO orf, hypothetical protein (VIMSS) 0.81 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) low > 76
Escherichia coli ECRC99 0.64 KEDOAH_10840 yheO Uncharacterized protein YheO 0.81 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Klebsiella pneumoniae MKP103 0.64 KDGMDA_06760 Uncharacterized protein YheO 0.81 KDGMDA_06970 phosphoenolpyruvate carboxykinase (ATP) low > 95
Escherichia coli ECRC100 0.64 OKFHMN_17300 yheO Uncharacterized protein YheO 0.81 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) low > 79
Escherichia coli ECRC101 0.64 MCAODC_07830 yheO Uncharacterized protein YheO 0.81 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) 0.30 17
Klebsiella michiganensis M5al 0.64 BWI76_RS25905 hypothetical protein 0.79 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) 0.16 46
Enterobacter asburiae PDN3 0.64 EX28DRAFT_4184 Uncharacterized protein conserved in bacteria 0.79 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) low > 76
Enterobacter sp. TBS_079 0.64 MPMX20_04239 Transcriptional regulator DauR 0.79 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) low > 85
Shewanella oneidensis MR-1 0.35 SO1402 conserved hypothetical protein (NCBI ptt file) 0.36 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.35 Shewana3_2973 YheO domain-containing protein (RefSeq) 0.36 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) low > 73
Fusobacterium nucleatum SB010 0.17 HUW76_09955 PAS domain-containing protein 0.39 HUW76_06485 phosphoenolpyruvate carboxykinase (ATP) low > 35
Rhizobium sp. OAE497 0.16 ABIE40_RS21180 PAS domain-containing protein 0.40 ABIE40_RS19415 phosphoenolpyruvate carboxykinase low > 107
Pseudomonas sp. BP01 0.16 JOY50_RS24520 transcriptional regulator 0.33 JOY50_RS18315 phosphoenolpyruvate carboxykinase low > 84
Pseudomonas fluorescens FW300-N2E3 0.16 AO353_04640 hypothetical protein 0.33 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] 0.25 99
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_1693 YheO-like PAS domain 0.33 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 87
Pseudomonas fluorescens FW300-N1B4 0.15 Pf1N1B4_923 YheO-like PAS domain 0.34 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) — —
Pseudomonas fluorescens SBW25 0.15 PFLU_RS13585 DNA-binding protein 0.34 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS13585 DNA-binding protein 0.34 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas simiae WCS417 0.15 PS417_12915 DNA-binding protein 0.34 PS417_01210 hypothetical protein low > 88
Pseudomonas sp. SVBP6 0.15 COO64_RS25095 transcriptional regulator 0.33 COO64_RS00660 phosphoenolpyruvate carboxykinase low > 93
Pseudomonas aeruginosa MRSN321 0.15 DY961_RS13545 dauR;inference=COORDINATES transcriptional regulator DauR 0.34 DY961_RS11825 phosphoenolpyruvate carboxykinase — —
Pseudomonas aeruginosa PA14 0.15 IKLFDK_19905 Transcriptional regulator DauR 0.34 IKLFDK_27515 phosphoenolpyruvate carboxykinase low > 98
Pseudomonas aeruginosa PUPa3 0.15 DQ20_RS48840 dauR;inference=COORDINATES transcriptional regulator DauR 0.34 DQ20_RS50285 phosphoenolpyruvate carboxykinase low > 101
Pseudomonas sp. DMC3 0.15 GFF1929 Transcriptional regulator DauR 0.33 GFF4175 Phosphoenolpyruvate carboxykinase (ATP) low > 89
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_5396 YheO-like PAS domain 0.32 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 103
Pseudomonas sp. S08-1 0.14 OH686_07030 YheO-like PAS domain 0.32 OH686_11060 phosphoenolpyruvate carboxykinase (ATP) low > 80
Pseudomonas fluorescens FW300-N2C3 0.14 AO356_17355 hypothetical protein 0.32 AO356_10140 phosphoenolpyruvate carboxykinase [ATP] low > 104
Sinorhizobium meliloti 1021 0.13 SMc04327 hypothetical protein 0.41 SMc02562 phosphoenolpyruvate carboxykinase low > 103
Pseudomonas sp. RS175 0.13 PFR28_03547 Transcriptional regulator DauR 0.34 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) low > 88

Not shown: 16 genomes with orthologs for CSW01_01875 only; 29 genomes with orthologs for CSW01_13810 only