Conservation of cofitness between CSW01_12850 and CSW01_13605 in Vibrio cholerae E7946 ATCC 55056

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12850 DUF615 family protein 1.0 CSW01_13605 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL 0.42 10
Dickeya dadantii 3937 0.51 DDA3937_RS01495 ribosome-associated protein 0.62 DDA3937_RS00755 tRNA (cytidine(34)-2'-O)-methyltransferase low > 74
Dickeya dianthicola 67-19 0.50 HGI48_RS01410 ribosome-associated protein 0.62 HGI48_RS20615 tRNA (cytidine(34)-2'-O)-methyltransferase low > 71
Dickeya dianthicola ME23 0.50 DZA65_RS01475 ribosome-associated protein 0.62 DZA65_RS21630 tRNA (cytidine(34)-2'-O)-methyltransferase — —
Serratia liquefaciens MT49 0.49 IAI46_22590 ribosome-associated protein 0.63 IAI46_24670 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL — —
Pantoea sp. MT58 0.47 IAI47_02760 ribosome-associated protein 0.61 IAI47_00750 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL — —
Erwinia amylovora T8 0.47 OLJFJH_02360 ribosome-associated protein 0.60 OLJFJH_05925 tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL — —
Pantoea agglomerans CFBP13505 P0401 0.46 PagCFBP13505_RS11360 ribosome-associated protein 0.61 PagCFBP13505_RS18595 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL low > 74
Erwinia tracheiphila SCR3 0.46 LU632_RS02140 ribosome-associated protein 0.59 LU632_RS21865 trmL tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL low > 73
Erwinia tracheiphila HP pepo 2.2 0.45 IJEDHG_06775 ribosome-associated protein 0.59 IJEDHG_07930 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL low > 61
Shewanella sp. ANA-3 0.37 Shewana3_3632 hypothetical protein (RefSeq) 0.68 Shewana3_3934 RNA methyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.37 SO4079 conserved hypothetical protein (NCBI ptt file) 0.68 SO4529 RNA methyltransferase, TrmH family, group 2 (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.35 MIT1002_00229 x96 protein 0.64 MIT1002_00480 tRNA (cytidine(34)-2'-O)-methyltransferase low > 70
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS09260 hypothetical protein 0.53 HSERO_RS20815 tRNA methyltransferase 0.21 21
Shewanella amazonensis SB2B 0.31 Sama_0481 hypothetical protein (RefSeq) 0.71 Sama_3440 RNA methyltransferase TrmH, group 2 (RefSeq) low > 62
Ralstonia solanacearum GMI1000 0.31 RS_RS04695 DUF615 domain-containing protein 0.55 RS_RS01765 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL low > 80
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS14755 hypothetical protein 0.53 RR42_RS01855 rRNA methylase low > 128
Methylophilus sp. DMC18 0.31 GFF831 hypothetical protein 0.58 GFF1665 tRNA (cytidine(34)-2'-O)-methyltransferase low > 43
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.1884.1 FIG138315: Putative alpha helix protein 0.58 Xcc-8004.277.1 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) — —
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU0975 conserved hypothetical protein (TIGR) 0.35 DVU2238 RNA methyltransferase, TrmH family (TIGR) low > 55
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS21710 ribosome biogenesis factor YjgA 0.54 ABZR86_RS13445 tRNA (cytidine(34)-2'-O)-methyltransferase low > 74
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS09655 ribosome biogenesis factor YjgA 0.55 ABZR87_RS06775 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL low > 80
Lysobacter sp. OAE881 0.29 ABIE51_RS06800 ribosome biogenesis factor YjgA 0.60 ABIE51_RS00285 tRNA (cytidine(34)-2'-O)-methyltransferase 0.29 40
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS14710 hypothetical protein 0.56 BPHYT_RS02620 tRNA methyltransferase low > 109
Kangiella aquimarina DSM 16071 0.27 B158DRAFT_2073 Uncharacterized protein conserved in bacteria 0.54 B158DRAFT_0713 rRNA methylase, putative, group 2 low > 40
Acidovorax sp. GW101-3H11 0.26 Ac3H11_3263 FIG138315: Putative alpha helix protein 0.54 Ac3H11_3896 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) — —
Shewanella loihica PV-4 0.24 Shew_0415 hypothetical protein (RefSeq) 0.62 Shew_3577 RNA methyltransferase (RefSeq) low > 60

Not shown: 0 genomes with orthologs for CSW01_12850 only; 80 genomes with orthologs for CSW01_13605 only