| Organism |  Ratio1 |  Gene1 |  Name1 |  Description1 |  Ratio2 |  Gene2 |  Name2 |  Description2 |  Cofit |  Rank | 
 | Vibrio cholerae E7946 ATCC 55056 |  1.0 |  CSW01_06670 |   |  penicillin-binding protein |  1.0 |  CSW01_12405 |   |  GTP diphosphokinase |  0.45 |  20 | 
 | Pseudomonas sp. S08-1 |  0.59 |  OH686_20440 |   |  Membrane carboxypeptidase (penicillin-binding protein) |  0.45 |  OH686_18960 |   |  Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase , (p)ppGpp synthetase I |  low |  > 80 | 
 | Pseudomonas sp. DMC3 |  0.58 |  GFF4298 |   |  hypothetical protein |  0.45 |  GFF4818 |   |  GTP pyrophosphokinase |  low |  > 89 | 
 | Pseudomonas fluorescens GW456-L13 |  0.58 |  PfGW456L13_4792 |   |  Membrane carboxypeptidase (penicillin-binding protein) |  0.45 |  PfGW456L13_2035 |   |  GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) |  low |  > 87 | 
 | Pseudomonas fluorescens FW300-N2C3 |  0.58 |  AO356_17660 |   |  glycosyl transferase family 51 |  0.45 |  AO356_19060 |   |  (p)ppGpp synthetase |  low |  > 104 | 
 | Pseudomonas fluorescens FW300-N2E2 |  0.58 |  Pf6N2E2_5457 |   |  Membrane carboxypeptidase (penicillin-binding protein) |  0.45 |  Pf6N2E2_5723 |   |  GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) |  low |  > 103 | 
 | Pseudomonas syringae pv. syringae B728a |  0.57 |  Psyr_3925 |   |  conserved hypothetical protein |  0.45 |  Psyr_3695 |   |  RelA/SpoT protein |  low |  > 86 | 
 | Pseudomonas syringae pv. syringae B728a ΔmexB |  0.57 |  Psyr_3925 |   |  conserved hypothetical protein |  0.45 |  Psyr_3695 |   |  RelA/SpoT protein |  low |  > 86 | 
 | Pseudomonas fluorescens FW300-N2E3 |  0.57 |  AO353_16110 |   |  glycosyl transferase family 51 |  0.45 |  AO353_02710 |   |  (p)ppGpp synthetase |  low |  > 101 | 
 | Pseudomonas sp. RS175 |  0.57 |  PFR28_03493 |   |  hypothetical protein |  0.45 |  PFR28_03223 |   |  GTP pyrophosphokinase |  low |  > 88 | 
 | Pseudomonas aeruginosa PA14 |  0.57 |  IKLFDK_03395 |   |  glycosyl transferase family 51 |  0.45 |  IKLFDK_04200 |   |  GTP diphosphokinase |  0.35 |  48 | 
 | Pseudomonas putida KT2440 |  0.57 |  PP_1058 |   |  conserved protein of unknown function |  0.45 |  PP_1656 |   |  ATP:GTP 3'-pyrophosphotransferase |  low |  > 96 | 
 | Pseudomonas lactucae CFBP13502 |  0.57 |  GEMAOFIL_01266 |   |  hypothetical protein |  0.45 |  GEMAOFIL_04223 |   |  GTP pyrophosphokinase |  low |  > 93 | 
 | Pseudomonas sp. BP01 |  0.57 |  JOY50_RS14785 |   |  transglycosylase domain-containing protein |  0.45 |  JOY50_RS23910 |  relA |  GTP diphosphokinase |  0.54 |  11 | 
 | Pseudomonas fluorescens SBW25 |  0.56 |  PFLU_RS05465 |   |  penicillin-binding protein |  0.45 |  PFLU_RS22095 |   |  GTP diphosphokinase |  low |  > 109 | 
 | Pseudomonas fluorescens SBW25-INTG |  0.56 |  PFLU_RS05465 |   |  penicillin-binding protein |  0.45 |  PFLU_RS22095 |   |  GTP diphosphokinase |  low |  > 109 | 
 | Pseudomonas sp. SVBP6 |  0.56 |  COO64_RS16685 |   |  transglycosylase domain-containing protein |  0.45 |  COO64_RS07325 |  relA |  GTP diphosphokinase |  low |  > 93 | 
 | Pseudomonas stutzeri RCH2 |  0.56 |  Psest_2431 |   |  Transglycosylase. |  0.44 |  Psest_1640 |   |  (p)ppGpp synthetase, RelA/SpoT family |  0.23 |  48 | 
 | Pseudomonas simiae WCS417 |  0.55 |  PS417_05395 |   |  glycosyl transferase family 51 |  0.45 |  PS417_20150 |   |  (p)ppGpp synthetase |  — |  — | 
 | Shewanella sp. ANA-3 |  0.51 |  Shewana3_1411 |   |  hypothetical protein (RefSeq) |  0.56 |  Shewana3_1111 |   |  (p)ppGpp synthetase I, SpoT/RelA (RefSeq) |  low |  > 73 | 
 | Hydrogenophaga sp. GW460-11-11-14-LB1 |  0.49 |  GFF20 |   |  Membrane carboxypeptidase (penicillin-binding protein) |  0.34 |  GFF4925 |   |  GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I |  low |  > 90 | 
 | Ralstonia solanacearum UW163 |  0.41 |  UW163_RS14090 |   |  penicillin-binding protein |  0.38 |  UW163_RS15115 |   |  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase |  — |  — | 
 | Ralstonia solanacearum PSI07 |  0.41 |  RPSI07_RS16755 |   |  penicillin-binding protein |  0.38 |  RPSI07_RS15685 |   |  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase |  low |  > 81 | 
 | Ralstonia solanacearum IBSBF1503 |  0.41 |  RALBFv3_RS00755 |   |  penicillin-binding protein |  0.38 |  RALBFv3_RS01805 |   |  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase |  low |  > 76 | 
 | Ralstonia solanacearum GMI1000 |  0.41 |  RS_RS07425 |   |  penicillin-binding protein |  0.38 |  RS_RS07930 |   |  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase |  low |  > 80 | 
 | Ralstonia sp. UNC404CL21Col |  0.40 |  ABZR87_RS12285 |   |  transglycosylase domain-containing protein |  0.38 |  ABZR87_RS13745 |   |  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase |  low |  > 80 | 
 | Paraburkholderia graminis OAS925 |  0.40 |  ABIE53_004069 |   |  membrane peptidoglycan carboxypeptidase |  0.35 |  ABIE53_002905 |   |  GTP pyrophosphokinase |  low |  > 113 | 
 | Paraburkholderia bryophila 376MFSha3.1 |  0.40 |  H281DRAFT_03222 |   |  Penicillin binding protein transpeptidase domain-containing protein |  0.35 |  H281DRAFT_04499 |   |  GTP pyrophosphokinase |  low |  > 103 | 
 | Paraburkholderia sabiae LMG 24235 |  0.39 |  QEN71_RS13110 |   |  transglycosylase domain-containing protein |  0.37 |  QEN71_RS05265 |   |  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase |  low |  > 153 | 
 | Burkholderia phytofirmans PsJN |  0.39 |  BPHYT_RS22725 |   |  glycosyl transferase family 51 |  0.35 |  BPHYT_RS13655 |   |  GTP pyrophosphokinase |  low |  > 109 | 
 | Cupriavidus basilensis FW507-4G11 |  0.36 |  RR42_RS30575 |   |  glycosyl transferase family 51 |  0.37 |  RR42_RS06585 |   |  GTP pyrophosphokinase |  low |  > 128 | 
Not shown: 4 genomes with orthologs for CSW01_06670 only; 57 genomes with orthologs for CSW01_12405 only